RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 ZNF721Q8TF20 911 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 DCUN1D4Q92564 292 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 EDAQ92838 391 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 C5orf34Q96MH7 638 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 NUDT22Q9BRQ3 303 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 BARX1Q9HBU1 254 aaPredicted RBP6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 HPF1Q9NWY4 346 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 PRR13Q9NZ81 148 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 NPIPA1Q9UND3 350 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 TRIOBPQ9H2D6 2365 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 IGKV1D-43A0A0B4J1Z2 117 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 A0A0B4J2A0 478 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 IGHV3-20A0A0C4DH32 117 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 TMEM200CA6NKL6 621 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 DXOO77932 396 aaKnown RBP6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 MELTFP08582 738 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 PI3P19957 117 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 RAB3AP20336 220 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 DRD1P21728 446 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 ABCD3P28288 659 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 SERPINF1P36955 418 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 MRPS21P82921 87 aaKnown RBP6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 EBPQ15125 230 aaKnown RBP6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 TMEM244Q5VVB8 128 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 ZNF704Q6ZNC4 412 aaPredicted RBP6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 MARCH1Q8TCQ1 289 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 ASB13Q8WXK3 278 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 FOXRED1Q96CU9 486 aaPredicted RBP6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 ARL5BQ96KC2 179 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 EDEM2Q9BV94 578 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 FOXQ1Q9C009 403 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 DNTTIP1Q9H147 329 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 TMEM231Q9H6L2 316 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 G6PC2Q9NQR9 355 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 VSX1Q9NZR4 365 aaPredicted RBP6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 SHPKQ9UHJ6 478 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 CD207Q9UJ71 328 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 RAB22AQ9UL26 194 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 VDAC3Q9Y277 283 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 PRUNE2Q8WUY3 3088 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 CABIN1Q9Y6J0 2220 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 ALG1L2C9J202 215 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 H7C2Y5 167 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 SULT2B1O00204 365 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 SYT7O43581 403 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 SLC25A4P12235 298 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 RPL35P42766 123 aaKnown RBP6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 SLC26A5P58743 744 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 POU3F1Q03052 451 aaPredicted RBP6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 TOMM20Q15388 145 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 INPP5JQ15735 1006 aaPredicted RBP6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 DEFB133Q30KQ1 61 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 ZNF260Q3ZCT1 412 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 KIAA0895LQ68EN5 471 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 LPCAT3Q6P1A2 487 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 ANGPTL5Q86XS5 388 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 OR10H5Q8NGA6 315 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 OR2I1PQ8NGU4 316 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 NKX2-4Q9H2Z4 354 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 OR2S2Q9NQN1 319 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 COPS7AQ9UBW8 275 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 MLXQ9UH92 298 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 CSAG2Q9Y5P2 127 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 SHISA8B8ZZ34 492 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 H3BML4 177 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 LDLRAD4O15165 306 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 F12P00748 615 aaPredicted RBP6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 IGKV3-11P04433 115 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 SLC2A1P11166 492 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 SLC9A3R2Q15599 337 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 GUCA2BQ16661 112 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 GFOD2Q3B7J2 385 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 AWAT2Q6E213 333 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 TMEM71Q6P5X7 295 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 HAGHLQ6PII5 290 aaPredicted RBP6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 KLHL24Q6TFL4 600 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 SLC29A4Q7RTT9 530 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 RNF144BQ7Z419 303 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 MITD1Q8WV92 249 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 ROBO4Q8WZ75 1007 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 AQP3Q92482 292 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 ADAT3Q96EY9 351 aaPredicted RBP6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 TMEM41AQ96HV5 264 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 PIGMQ9H3S5 423 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 SEC61A2Q9H9S3 476 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 CHMP1AQ9HD42 196 aaPredicted RBP6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 TREM1Q9NP99 234 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 MED12Q93074 2177 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 LAMA1P25391 3075 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 F8W036 122 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 ATG12O94817 140 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 CFPP27918 469 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 PSMB6P28072 239 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 NPY4RP50391 375 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 BLOC1S1P78537 153 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 AIMP2Q13155 320 aaKnown RBP6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 UNC119Q13432 240 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 C1orf100Q5SVJ3 147 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 Q6ZS52 159 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 TMPPEQ6ZT21 453 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms