RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 NDUFB2O95178 105 aa10.24□□□□□ -0.77
HLA-DQB3-203ENST00000425319 ECDO95905 644 aaPredicted RBP10.24□□□□□ -0.77
HLA-DQB3-203ENST00000425319 COQ5Q5HYK3 327 aa10.24□□□□□ -0.77
HLA-DQB3-203ENST00000425319 ADCK1Q86TW2 530 aa10.24□□□□□ -0.77
HLA-DQB3-203ENST00000425319 FITM2Q8N6M3 262 aa10.24□□□□□ -0.77
HLA-DQB3-203ENST00000425319 SPERTQ8NA61 448 aa10.24□□□□□ -0.77
HLA-DQB3-203ENST00000425319 BHLHE23Q8NDY6 225 aa10.24□□□□□ -0.77
HLA-DQB3-203ENST00000425319 OR2T12Q8NG77 320 aa10.24□□□□□ -0.77
HLA-DQB3-203ENST00000425319 COQ7Q99807 217 aa10.24□□□□□ -0.77
HLA-DQB3-203ENST00000425319 CITED1Q99966 193 aa10.24□□□□□ -0.77
HLA-DQB3-203ENST00000425319 MARCH7Q9H992 704 aa10.24□□□□□ -0.77
HLA-DQB3-203ENST00000425319 NMNAT1Q9HAN9 279 aaPredicted RBP10.24□□□□□ -0.77
HLA-DQB3-203ENST00000425319 C1RLQ9NZP8 487 aa10.24□□□□□ -0.77
HLA-DQB3-203ENST00000425319 RNF7Q9UBF6 113 aa10.24□□□□□ -0.77
HLA-DQB3-203ENST00000425319 COA3Q9Y2R0 106 aaPredicted RBP10.24□□□□□ -0.77
HLA-DQB3-203ENST00000425319 A0A0G2JND7 137 aa10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 F5H5P2 479 aa10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 H7C1C5 153 aa10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 MRASO14807 208 aa10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 TNFRSF13BO14836 293 aaPredicted RBP10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 PIP5K1CO60331 668 aa10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 GMNNO75496 209 aa10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 RENP00797 406 aa10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 EEF1B2P24534 225 aaKnown RBP10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 SDHAP31040 664 aa10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 GRK5P34947 590 aa10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 YAP1P46937 504 aaKnown RBP10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 TPTEP56180 551 aa10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 LCN6P62502 163 aa10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 PAX2Q02962 417 aa10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 KRT72Q14CN4 511 aa10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 OR8G1Q15617 311 aa10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 OR8B8Q15620 311 aa10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 RABL3Q5HYI8 236 aa10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 TMEM255AQ5JRV8 349 aa10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 TMPRSS11FQ6ZWK6 438 aa10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 MBOAT2Q6ZWT7 520 aa10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 PGAP1Q75T13 922 aa10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 MRPL21Q7Z2W9 205 aaKnown RBP10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 TSPYL5Q86VY4 417 aaPredicted RBP10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 CMTM4Q8IZR5 234 aa10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 OFCC1Q8IZS5 231 aa10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 PLPP7Q8NBV4 271 aa10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 NPRL2Q8WTW4 380 aa10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 ATP6V1G3Q96LB4 118 aa10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 Q96M85 177 aa10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 PKP2Q99959 881 aa10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 RBM4BQ9BQ04 359 aaKnown RBP10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 CHIAQ9BZP6 476 aa10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 ANKRD19PQ9H560 264 aa10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 PDP1Q9P0J1 537 aaPredicted RBP10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 RPS6KA6Q9UK32 745 aa10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 SVEP1Q4LDE5 3571 aa10.23□□□□□ -0.77
HLA-DQB3-203ENST00000425319 MDFIC2A0A1B0GVS7 189 aa10.22□□□□□ -0.77
HLA-DQB3-203ENST00000425319 F5H5K5 113 aa10.22□□□□□ -0.77
HLA-DQB3-203ENST00000425319 NDUFAB1O14561 156 aa10.22□□□□□ -0.77
HLA-DQB3-203ENST00000425319 RER1O15258 196 aa10.22□□□□□ -0.77
HLA-DQB3-203ENST00000425319 GMDSO60547 372 aa10.22□□□□□ -0.77
HLA-DQB3-203ENST00000425319 ZNF682O95780 498 aa10.22□□□□□ -0.77
HLA-DQB3-203ENST00000425319 HLA-DQA2P01906 255 aa10.22□□□□□ -0.77
HLA-DQB3-203ENST00000425319 LCATP04180 440 aa10.22□□□□□ -0.77
HLA-DQB3-203ENST00000425319 MELTFP08582 738 aa10.22□□□□□ -0.77
HLA-DQB3-203ENST00000425319 TROVE2P10155 538 aaKnown RBP eCLIP10.22□□□□□ -0.77
HLA-DQB3-203ENST00000425319 GGT2P36268 569 aa10.22□□□□□ -0.77
HLA-DQB3-203ENST00000425319 GATA4P43694 442 aa10.22□□□□□ -0.77
HLA-DQB3-203ENST00000425319 GZMMP51124 257 aa10.22□□□□□ -0.77
HLA-DQB3-203ENST00000425319 KRR1Q13601 381 aaKnown RBP10.22□□□□□ -0.77
HLA-DQB3-203ENST00000425319 C2orf68Q2NKX9 166 aa10.22□□□□□ -0.77
HLA-DQB3-203ENST00000425319 IFI44LQ53G44 452 aa10.22□□□□□ -0.77
HLA-DQB3-203ENST00000425319 CCDC92Q53HC0 331 aaPredicted RBP10.22□□□□□ -0.77
HLA-DQB3-203ENST00000425319 BEND6Q5SZJ8 279 aaPredicted RBP10.22□□□□□ -0.77
HLA-DQB3-203ENST00000425319 ARPINQ7Z6K5 226 aa10.22□□□□□ -0.77
HLA-DQB3-203ENST00000425319 CALHM3Q86XJ0 350 aa10.22□□□□□ -0.77
HLA-DQB3-203ENST00000425319 BOLLQ8N9W6 283 aaKnown RBP10.22□□□□□ -0.77
HLA-DQB3-203ENST00000425319 LRRC75AQ8NAA5 344 aa10.22□□□□□ -0.77
HLA-DQB3-203ENST00000425319 FAM156AQ8NDB6 213 aa10.22□□□□□ -0.77
HLA-DQB3-203ENST00000425319 SPTSSAQ969W0 71 aa10.22□□□□□ -0.77
HLA-DQB3-203ENST00000425319 WDFY2Q96P53 400 aa10.22□□□□□ -0.77
HLA-DQB3-203ENST00000425319 PITX2Q99697 317 aa10.22□□□□□ -0.77
HLA-DQB3-203ENST00000425319 TMEM120AQ9BXJ8 343 aa10.22□□□□□ -0.77
HLA-DQB3-203ENST00000425319 NSRP1Q9H0G5 558 aaKnown RBP10.22□□□□□ -0.77
HLA-DQB3-203ENST00000425319 SYT4Q9H2B2 425 aa10.22□□□□□ -0.77
HLA-DQB3-203ENST00000425319 POFUT1Q9H488 388 aa10.22□□□□□ -0.77
HLA-DQB3-203ENST00000425319 C14orf119Q9NWQ9 140 aa10.22□□□□□ -0.77
HLA-DQB3-203ENST00000425319 RHCGQ9UBD6 479 aa10.22□□□□□ -0.77
HLA-DQB3-203ENST00000425319 A4GNTQ9UNA3 340 aa10.22□□□□□ -0.77
HLA-DQB3-203ENST00000425319 IGHV3-64DA0A0J9YX35 117 aa10.21□□□□□ -0.77
HLA-DQB3-203ENST00000425319 ANKRD61A6NGH8 418 aa10.21□□□□□ -0.77
HLA-DQB3-203ENST00000425319 GGT3PA6NGU5 568 aa10.21□□□□□ -0.77
HLA-DQB3-203ENST00000425319 SLC22A31A6NKX4 558 aa10.21□□□□□ -0.77
HLA-DQB3-203ENST00000425319 FAM220BPB1ANY3 271 aa10.21□□□□□ -0.77
HLA-DQB3-203ENST00000425319 H0YL77 283 aa10.21□□□□□ -0.77
HLA-DQB3-203ENST00000425319 LGALS8O00214 317 aa10.21□□□□□ -0.77
HLA-DQB3-203ENST00000425319 ADAM20O43506 726 aa10.21□□□□□ -0.77
HLA-DQB3-203ENST00000425319 CLPXO76031 633 aa10.21□□□□□ -0.77
HLA-DQB3-203ENST00000425319 SCG5P05408 212 aa10.21□□□□□ -0.77
HLA-DQB3-203ENST00000425319 NOS3P29474 1203 aa10.21□□□□□ -0.77
HLA-DQB3-203ENST00000425319 CFHR2P36980 270 aa10.21□□□□□ -0.77
HLA-DQB3-203ENST00000425319 KCNMB1Q16558 191 aa10.21□□□□□ -0.77
HLA-DQB3-203ENST00000425319 DPY19L2P2Q6ZN68 376 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms