RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 MASP2O00187 686 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 P2RY10O00398 339 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 ARPC5O15511 151 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 MT-CO3P00414 261 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 S100A6P06703 90 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 CPN1P15169 458 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 CXCL2P19875 107 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 FOXF1Q12946 379 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 OPCMLQ14982 345 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 C2orf68Q2NKX9 166 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 ALKBH2Q6NS38 261 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 TMED4Q7Z7H5 227 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.52□□□□□ -0.89
CUX1-205ENST00000425244 SPICQ8N5J4 248 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 STK35Q8TDR2 534 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 KLRF1Q9NZS2 232 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 HHLA2Q9UM44 414 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 MAB21L2Q9Y586 359 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 FXYD6-FXYD2A0A087WZ82 144 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 TRBV11-1A0A0K0K1C0 115 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 TMEM269A0A1B0GVZ9 245 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 LINC00862A6NCI5 91 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 SNRPGP15A8MWD9 76 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 FTCDNL1E5RQL4 147 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 MS4A18H0YCH9 400 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 TOR1AO14656 332 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 RGS11O94810 467 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 IL5P05113 134 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 CSN2P05814 226 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 ZNF35P13682 527 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 NUBP1P53384 320 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 SCAND1P57086 179 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 RAP2BP61225 183 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 MS4A18Q3C1V0 323 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 STEAP1BQ6NZ63 245 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 PAPD4Q6PIY7 484 aaKnown RBP9.52□□□□□ -0.89
CUX1-205ENST00000425244 ANKRD37Q7Z713 158 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 MUC20Q8N307 709 aaPredicted RBP9.52□□□□□ -0.89
CUX1-205ENST00000425244 ZNF454Q8N9F8 522 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 CHST6Q9GZX3 395 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 FXYD6Q9H0Q3 95 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 OR52A1Q9UKL2 312 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 MRPS18BQ9Y676 258 aaKnown RBP9.52□□□□□ -0.89
CUX1-205ENST00000425244 R4GMQ9 66 aa9.52□□□□□ -0.89
CUX1-205ENST00000425244 A0A1W2PNU3 283 aaPredicted RBP9.51□□□□□ -0.89
CUX1-205ENST00000425244 C9J4A7 227 aa9.51□□□□□ -0.89
CUX1-205ENST00000425244 LINC01387J3KSC0 135 aa9.51□□□□□ -0.89
CUX1-205ENST00000425244 DLX5P56178 289 aa9.51□□□□□ -0.89
CUX1-205ENST00000425244 HSF1Q00613 529 aa9.51□□□□□ -0.89
CUX1-205ENST00000425244 H1FNTQ75WM6 255 aaPredicted RBP9.51□□□□□ -0.89
CUX1-205ENST00000425244 SLC26A10Q8NG04 563 aa9.51□□□□□ -0.89
CUX1-205ENST00000425244 ASB10Q8WXI3 467 aa9.51□□□□□ -0.89
CUX1-205ENST00000425244 RADILQ96JH8 1075 aa9.51□□□□□ -0.89
CUX1-205ENST00000425244 SFXN2Q96NB2 322 aa9.51□□□□□ -0.89
CUX1-205ENST00000425244 TGIF2Q9GZN2 237 aa9.51□□□□□ -0.89
CUX1-205ENST00000425244 FARSAQ9Y285 508 aaKnown RBP9.51□□□□□ -0.89
CUX1-205ENST00000425244 COL5A1P20908 1838 aaPredicted RBP9.51□□□□□ -0.89
CUX1-205ENST00000425244 AKAP13Q12802 2813 aa9.51□□□□□ -0.89
CUX1-205ENST00000425244 NUP210LQ5VU65 1888 aa9.51□□□□□ -0.89
CUX1-205ENST00000425244 RPS10-NUDT3A0A1W2PQS6 291 aa9.51□□□□□ -0.89
CUX1-205ENST00000425244 A6NIZ1 184 aa9.51□□□□□ -0.89
CUX1-205ENST00000425244 H2BFMP0C1H6 154 aa9.51□□□□□ -0.89
CUX1-205ENST00000425244 TCN2P20062 427 aa9.51□□□□□ -0.89
CUX1-205ENST00000425244 NFYAP23511 347 aaPredicted RBP9.51□□□□□ -0.89
CUX1-205ENST00000425244 GNALP38405 381 aa9.51□□□□□ -0.89
CUX1-205ENST00000425244 DAP3P51398 398 aaKnown RBP9.51□□□□□ -0.89
CUX1-205ENST00000425244 H2BFSP57053 126 aa9.51□□□□□ -0.89
CUX1-205ENST00000425244 RAP1BP61224 184 aa9.51□□□□□ -0.89
CUX1-205ENST00000425244 RAP1AP62834 184 aa9.51□□□□□ -0.89
CUX1-205ENST00000425244 DNM1P34Q6PK57 102 aa9.51□□□□□ -0.89
CUX1-205ENST00000425244 ZNF704Q6ZNC4 412 aaPredicted RBP9.51□□□□□ -0.89
CUX1-205ENST00000425244 DNM1P46Q6ZS02 220 aa9.51□□□□□ -0.89
CUX1-205ENST00000425244 GABRG1Q8N1C3 465 aa9.51□□□□□ -0.89
CUX1-205ENST00000425244 ACBD4Q8NC06 268 aa9.51□□□□□ -0.89
CUX1-205ENST00000425244 APCDD1LQ8NCL9 501 aa9.51□□□□□ -0.89
CUX1-205ENST00000425244 PLPP5Q8NEB5 264 aa9.51□□□□□ -0.89
CUX1-205ENST00000425244 OR6N1Q8NGY5 312 aa9.51□□□□□ -0.89
CUX1-205ENST00000425244 SLC25A28Q96A46 364 aa9.51□□□□□ -0.89
CUX1-205ENST00000425244 FOXJ2Q9P0K8 574 aa9.51□□□□□ -0.89
CUX1-205ENST00000425244 HRH3Q9Y5N1 445 aa9.51□□□□□ -0.89
CUX1-205ENST00000425244 IGLV3-12A0A075B6K2 115 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 PLSCR5A0PG75 271 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 ANKUB1A6NFN9 424 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 ADAM10O14672 748 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 RAB3DO95716 219 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 IGHMP01871 453 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 MAP2K6P52564 334 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 BIDP55957 195 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 C17orf67Q0P5P2 114 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 MOGAT2Q3SYC2 334 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 SCGB2B2Q4G0G5 96 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 DCAF12L2Q5VW00 463 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 FAM198BQ6UWH4 519 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 SLC36A1Q7Z2H8 476 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 CLEC1AQ8NC01 280 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 OR10H5Q8NGA6 315 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 FAM46BQ96A09 425 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 SEH1LQ96EE3 360 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 UTP23Q9BRU9 249 aaKnown RBP9.5□□□□□ -0.89
CUX1-205ENST00000425244 TINAGL1Q9GZM7 467 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms