RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 OCEL1Q9H607 264 aa10.99□□□□□ -0.65
VRK3-203ENST00000424804 ELOVL3Q9HB03 270 aa10.99□□□□□ -0.65
VRK3-203ENST00000424804 SLCO1C1Q9NYB5 712 aa10.99□□□□□ -0.65
VRK3-203ENST00000424804 DNAJB9Q9UBS3 223 aa10.99□□□□□ -0.65
VRK3-203ENST00000424804 OPN4Q9UHM6 478 aa10.99□□□□□ -0.65
VRK3-203ENST00000424804 GPR160Q9UJ42 338 aa10.99□□□□□ -0.65
VRK3-203ENST00000424804 WIPI2Q9Y4P8 454 aa10.99□□□□□ -0.65
VRK3-203ENST00000424804 PKD1L1Q8TDX9 2849 aa10.99□□□□□ -0.65
VRK3-203ENST00000424804 RIIAD1A6NNX1 92 aa10.98□□□□□ -0.65
VRK3-203ENST00000424804 ICMTO60725 284 aa10.98□□□□□ -0.65
VRK3-203ENST00000424804 NGFP01138 241 aa10.98□□□□□ -0.65
VRK3-203ENST00000424804 IFNGP01579 166 aa10.98□□□□□ -0.65
VRK3-203ENST00000424804 IGHV1-46P01743 117 aa10.98□□□□□ -0.65
VRK3-203ENST00000424804 ADH4P08319 380 aa10.98□□□□□ -0.65
VRK3-203ENST00000424804 DBHP09172 617 aa10.98□□□□□ -0.65
VRK3-203ENST00000424804 HOXB6P17509 224 aaKnown RBP10.98□□□□□ -0.65
VRK3-203ENST00000424804 RPS27P42677 84 aaKnown RBP10.98□□□□□ -0.65
VRK3-203ENST00000424804 HILS1P60008 231 aa10.98□□□□□ -0.65
VRK3-203ENST00000424804 GK3PQ14409 553 aa10.98□□□□□ -0.65
VRK3-203ENST00000424804 CCDC92Q53HC0 331 aaPredicted RBP10.98□□□□□ -0.65
VRK3-203ENST00000424804 ACSM5Q6NUN0 579 aa10.98□□□□□ -0.65
VRK3-203ENST00000424804 FAHD2BQ6P2I3 314 aaPredicted RBP10.98□□□□□ -0.65
VRK3-203ENST00000424804 USP43Q70EL4 1123 aa10.98□□□□□ -0.65
VRK3-203ENST00000424804 GJC3Q8NFK1 279 aa10.98□□□□□ -0.65
VRK3-203ENST00000424804 OR6K6Q8NGW6 343 aa10.98□□□□□ -0.65
VRK3-203ENST00000424804 OR2T4Q8NH00 348 aa10.98□□□□□ -0.65
VRK3-203ENST00000424804 OR1F12Q8NHA8 337 aa10.98□□□□□ -0.65
VRK3-203ENST00000424804 IPCEF1Q8WWN9 437 aaPredicted RBP10.98□□□□□ -0.65
VRK3-203ENST00000424804 FAHD2AQ96GK7 314 aa10.98□□□□□ -0.65
VRK3-203ENST00000424804 PITX2Q99697 317 aa10.98□□□□□ -0.65
VRK3-203ENST00000424804 WACQ9BTA9 647 aa10.98□□□□□ -0.65
VRK3-203ENST00000424804 MED20Q9H944 212 aa10.98□□□□□ -0.65
VRK3-203ENST00000424804 ESM1Q9NQ30 184 aa10.98□□□□□ -0.65
VRK3-203ENST00000424804 DCAF16Q9NXF7 216 aa10.98□□□□□ -0.65
VRK3-203ENST00000424804 BAIAP2Q9UQB8 552 aa10.98□□□□□ -0.65
VRK3-203ENST00000424804 LHFPL6Q9Y693 200 aa10.98□□□□□ -0.65
VRK3-203ENST00000424804 ZSCAN5BA6NJL1 495 aa10.97□□□□□ -0.65
VRK3-203ENST00000424804 FAM183AA6NL82 134 aa10.97□□□□□ -0.65
VRK3-203ENST00000424804 RGS9O75916 674 aaPredicted RBP10.97□□□□□ -0.65
VRK3-203ENST00000424804 PNPP00491 289 aa10.97□□□□□ -0.65
VRK3-203ENST00000424804 MT-ND5P03915 603 aa10.97□□□□□ -0.65
VRK3-203ENST00000424804 COX5BP10606 129 aa10.97□□□□□ -0.65
VRK3-203ENST00000424804 CLUP10909 449 aa10.97□□□□□ -0.65
VRK3-203ENST00000424804 ZNF3P17036 446 aa10.97□□□□□ -0.65
VRK3-203ENST00000424804 EGR1P18146 543 aa10.97□□□□□ -0.65
VRK3-203ENST00000424804 EPHA1P21709 976 aa10.97□□□□□ -0.65
VRK3-203ENST00000424804 COX10Q12887 443 aa10.97□□□□□ -0.65
VRK3-203ENST00000424804 KCNMB1Q16558 191 aa10.97□□□□□ -0.65
VRK3-203ENST00000424804 TSTQ16762 297 aaKnown RBP10.97□□□□□ -0.65
VRK3-203ENST00000424804 MBNL2Q5VZF2 373 aaKnown RBP10.97□□□□□ -0.65
VRK3-203ENST00000424804 LYPD4Q6UWN0 246 aa10.97□□□□□ -0.65
VRK3-203ENST00000424804 C1QL2Q7Z5L3 287 aa10.97□□□□□ -0.65
VRK3-203ENST00000424804 ZBTB46Q86UZ6 589 aa10.97□□□□□ -0.65
VRK3-203ENST00000424804 LNX2Q8N448 690 aa10.97□□□□□ -0.65
VRK3-203ENST00000424804 SLC26A10Q8NG04 563 aa10.97□□□□□ -0.65
VRK3-203ENST00000424804 KLF14Q8TD94 323 aaPredicted RBP10.97□□□□□ -0.65
VRK3-203ENST00000424804 ZNRF4Q8WWF5 429 aa10.97□□□□□ -0.65
VRK3-203ENST00000424804 MMADHCQ9H3L0 296 aaPredicted RBP10.97□□□□□ -0.65
VRK3-203ENST00000424804 PLSCR5A0PG75 271 aa10.96□□□□□ -0.65
VRK3-203ENST00000424804 ARRDC5A6NEK1 342 aa10.96□□□□□ -0.65
VRK3-203ENST00000424804 SPRY3O43610 288 aa10.96□□□□□ -0.65
VRK3-203ENST00000424804 TIMM8AO60220 97 aaPredicted RBP10.96□□□□□ -0.65
VRK3-203ENST00000424804 SPARCP09486 303 aa10.96□□□□□ -0.65
VRK3-203ENST00000424804 ANXA8P13928 327 aa10.96□□□□□ -0.65
VRK3-203ENST00000424804 ADRA2CP18825 462 aa10.96□□□□□ -0.65
VRK3-203ENST00000424804 ZFP36P26651 326 aaKnown RBP10.96□□□□□ -0.65
VRK3-203ENST00000424804 ZNF81P51508 661 aa10.96□□□□□ -0.65
VRK3-203ENST00000424804 GINS1Q14691 196 aa10.96□□□□□ -0.65
VRK3-203ENST00000424804 MOGQ16653 247 aa10.96□□□□□ -0.65
VRK3-203ENST00000424804 FAM209AQ5JX71 171 aa10.96□□□□□ -0.65
VRK3-203ENST00000424804 SLC18B1Q6NT16 456 aa10.96□□□□□ -0.65
VRK3-203ENST00000424804 SLC27A4Q6P1M0 643 aa10.96□□□□□ -0.65
VRK3-203ENST00000424804 C12orf54Q6X4T0 127 aa10.96□□□□□ -0.65
VRK3-203ENST00000424804 CFAP77Q6ZQR2 320 aa10.96□□□□□ -0.65
VRK3-203ENST00000424804 PEG10Q86TG7 708 aaKnown RBP10.96□□□□□ -0.65
VRK3-203ENST00000424804 ZDHHC22Q8N966 263 aa10.96□□□□□ -0.65
VRK3-203ENST00000424804 PAPD5Q8NDF8 572 aaKnown RBP10.96□□□□□ -0.65
VRK3-203ENST00000424804 FAM216AQ8WUB2 273 aa10.96□□□□□ -0.65
VRK3-203ENST00000424804 DVL3Q92997 716 aaPredicted RBP10.96□□□□□ -0.65
VRK3-203ENST00000424804 PLEKHA8Q96JA3 519 aa10.96□□□□□ -0.65
VRK3-203ENST00000424804 HDHD2Q9H0R4 259 aa10.96□□□□□ -0.65
VRK3-203ENST00000424804 OR51V1Q9H2C8 321 aa10.96□□□□□ -0.65
VRK3-203ENST00000424804 POFUT1Q9H488 388 aa10.96□□□□□ -0.65
VRK3-203ENST00000424804 MRPL22Q9NWU5 206 aaKnown RBP10.96□□□□□ -0.65
VRK3-203ENST00000424804 PTTG3PQ9NZH4 202 aa10.96□□□□□ -0.65
VRK3-203ENST00000424804 PCDHB10Q9UN67 800 aa10.96□□□□□ -0.65
VRK3-203ENST00000424804 AP4S1Q9Y587 144 aa10.96□□□□□ -0.65
VRK3-203ENST00000424804 MEGF8Q7Z7M0 2845 aa10.95□□□□□ -0.66
VRK3-203ENST00000424804 OR6C6A6NF89 314 aa10.95□□□□□ -0.66
VRK3-203ENST00000424804 F5H5K5 113 aa10.95□□□□□ -0.66
VRK3-203ENST00000424804 CD55P08174 381 aa10.95□□□□□ -0.66
VRK3-203ENST00000424804 OSMP13725 252 aa10.95□□□□□ -0.66
VRK3-203ENST00000424804 ANPEPP15144 967 aa10.95□□□□□ -0.66
VRK3-203ENST00000424804 SPI1P17947 270 aa10.95□□□□□ -0.66
VRK3-203ENST00000424804 FASP25445 335 aa10.95□□□□□ -0.66
VRK3-203ENST00000424804 FMO3P31513 532 aa10.95□□□□□ -0.66
VRK3-203ENST00000424804 GRK5P34947 590 aa10.95□□□□□ -0.66
VRK3-203ENST00000424804 TMEM236Q5W0B7 351 aa10.95□□□□□ -0.66
VRK3-203ENST00000424804 SHQ1Q6PI26 577 aaKnown RBP10.95□□□□□ -0.66
VRK3-203ENST00000424804 CD300LDQ6UXZ3 194 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms