RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 TMEM216Q9P0N5 145 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 GIMAP2Q9UG22 337 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.07□□□□□ -1.6
SDCBP-203ENST00000424270 ANGPT4Q9Y264 503 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 CCL27Q9Y4X3 112 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 DNAH7Q8WXX0 4024 aa5.07□□□□□ -1.6
SDCBP-203ENST00000424270 STARD9Q9P2P6 4700 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 A0A1B0GWA3 101 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 C12orf71A8MTZ7 269 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 TP73O15350 636 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 MLNRO43193 412 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 ICMTO60725 284 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 BGLAPP02818 100 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 BCHEP06276 602 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 GRPP07492 148 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 NDUFB7P17568 137 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 RPS4Y1P22090 263 aaKnown RBP5.06□□□□□ -1.6
SDCBP-203ENST00000424270 MAP2K3P46734 347 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 GSK3AP49840 483 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 NAA20P61599 178 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 MRPS34P82930 218 aaKnown RBP5.06□□□□□ -1.6
SDCBP-203ENST00000424270 MPPED2Q15777 294 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 MICBQ29980 383 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 CLEC12AQ5QGZ9 265 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 ANXA8L1Q5VT79 327 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 RNF220Q5VTB9 566 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 C10orf99Q6UWK7 81 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 LYPD4Q6UWN0 246 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 FRMD7Q6ZUT3 714 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 ZNF572Q7Z3I7 529 aaPredicted RBP5.06□□□□□ -1.6
SDCBP-203ENST00000424270 HDDC2Q7Z4H3 204 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 RPP25LQ8N5L8 163 aaKnown RBP5.06□□□□□ -1.6
SDCBP-203ENST00000424270 TRIML2Q8N7C3 387 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 FAM216BQ8N7L0 139 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 Q8N7P7 452 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 Q8TCH9 128 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 AGR3Q8TD06 166 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 DNAJA4Q8WW22 397 aaPredicted RBP5.06□□□□□ -1.6
SDCBP-203ENST00000424270 SPRYD4Q8WW59 207 aaPredicted RBP5.06□□□□□ -1.6
SDCBP-203ENST00000424270 SLC41A3Q96GZ6 507 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 AKR1E2Q96JD6 320 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 PKNOX2Q96KN3 472 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 TEX37Q96LM6 180 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 NAPGQ99747 312 aaPredicted RBP5.06□□□□□ -1.6
SDCBP-203ENST00000424270 SPATA25Q9BR10 227 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 WDR76Q9H967 626 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 P2RX2Q9UBL9 471 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 ABCA13Q86UQ4 5058 aa5.06□□□□□ -1.6
SDCBP-203ENST00000424270 IGKV1D-42A0A075B6H8 117 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 PSMB11A5LHX3 300 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 GMNCA6NCL1 334 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 A6NDX4 124 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 NKX6-3A6NJ46 265 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 PRR23D1E9PI22 279 aaPredicted RBP5.05□□□□□ -1.6
SDCBP-203ENST00000424270 BLOC1S5-TXNDC5H3BN57 136 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 M0R1W7 72 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 MT-ATP6P00846 226 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 IGHA1P01876 353 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 PRR23D2P0DMB1 279 aaPredicted RBP5.05□□□□□ -1.6
SDCBP-203ENST00000424270 MED14OSP0DP75 135 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 NR2C1P13056 603 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 MAGEA12P43365 314 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 CEBPDP49716 269 aaPredicted RBP5.05□□□□□ -1.6
SDCBP-203ENST00000424270 DAP3P51398 398 aaKnown RBP5.05□□□□□ -1.6
SDCBP-203ENST00000424270 CRISP3P54108 245 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 GMFBP60983 142 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 RPL23AP62750 156 aaKnown RBP5.05□□□□□ -1.6
SDCBP-203ENST00000424270 SSX2Q16385 188 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 SRSF7Q16629 238 aaKnown RBP eCLIP5.05□□□□□ -1.6
SDCBP-203ENST00000424270 RPS26P11Q5JNZ5 115 aaPredicted RBP5.05□□□□□ -1.6
SDCBP-203ENST00000424270 FAM91A1Q658Y4 838 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 ULK3Q6PHR2 472 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 NANOGNBQ7Z5D8 188 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 CPLX4Q7Z7G2 160 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 DHDDSQ86SQ9 333 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 FAM90A1Q86YD7 464 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 FAM185AQ8N0U4 392 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 LY6G5BQ8NDX9 201 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 OR9Q1Q8NGQ5 310 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 BCAS4Q8TDM0 211 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 TWIST2Q8WVJ9 160 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 TNFRSF14Q92956 283 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 RASD2Q96D21 266 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 DUS3LQ96G46 650 aaKnown RBP5.05□□□□□ -1.6
SDCBP-203ENST00000424270 PAFAH2Q99487 392 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 HEXA-AS1Q9H8Q6 139 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 C12orf10Q9HB07 376 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 TMEM27Q9HBJ8 222 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 SLC13A4Q9UKG4 626 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 PRPF19Q9UMS4 504 aaKnown RBP5.05□□□□□ -1.6
SDCBP-203ENST00000424270 SNX12Q9UMY4 172 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 IFT52Q9Y366 437 aa5.05□□□□□ -1.6
SDCBP-203ENST00000424270 NOP16Q9Y3C1 178 aaKnown RBP5.05□□□□□ -1.6
SDCBP-203ENST00000424270 HUWE1Q7Z6Z7 4374 aaKnown RBP5.04□□□□□ -1.6
SDCBP-203ENST00000424270 hCG_1809904A0A1W2PP81 198 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 A0A1W2PPE2 198 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 A0A1W2PR64 198 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 A0A1W2PRV1 198 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 CCL24O00175 119 aa5.04□□□□□ -1.6
SDCBP-203ENST00000424270 KPNA4O00629 521 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms