RNA–Protein interactions for RNA: ENST00000424265.5

USP54-205, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 5,201 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-205ENST00000424265 C4orf47A7E2U8 309 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 DVL1O14640 695 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 MT-CO3P00414 261 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 ITGA5P08648 1049 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 FHITP49789 147 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 ERVFC1-1P60608 527 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 RANP62826 216 aaKnown RBP8.87□□□□□ -0.99
USP54-205ENST00000424265 VAMP3Q15836 100 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 ACOT7LQ6ZUV0 252 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 ASB13Q8WXK3 278 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 NELFAQ9H3P2 528 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 SEMA4GQ9NTN9 838 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 GPATCH2Q9NW75 528 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 KLRF1Q9NZS2 232 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 UMAD1C9J7I0 102 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 PDGFBP01127 241 aaPredicted RBP8.87□□□□□ -0.99
USP54-205ENST00000424265 PRH1P02810 166 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 SERPINA2P20848 420 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 ACKR3P25106 362 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 SLC6A8P48029 635 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 YBX1P67809 324 aaKnown RBP8.87□□□□□ -0.99
USP54-205ENST00000424265 SRSF5Q13243 272 aaKnown RBP8.87□□□□□ -0.99
USP54-205ENST00000424265 OR8G2PQ6IF36 304 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 GUSBP11Q6P575 273 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 OPN5Q6U736 354 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 GID4Q8IVV7 300 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 EXD3Q8N9H8 876 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 LINC01555Q8NAE3 123 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 OR5L1Q8NGL2 311 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 OR8J1Q8NGP2 316 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 OR5M8Q8NGP6 311 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 C1orf216Q8TAB5 229 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 CYSLTR2Q9NS75 346 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 MRPS18CQ9Y3D5 142 aaKnown RBP8.87□□□□□ -0.99
USP54-205ENST00000424265 ASB1Q9Y576 335 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 MMP24Q9Y5R2 645 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 URGCP-MRPS24S4R325 110 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 RNF212BA8MTL3 300 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 SOX14O95416 240 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 GABRR1P24046 479 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 KDELR2P33947 212 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 BSGP35613 385 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 NOVA1P51513 510 aaKnown RBP8.87□□□□□ -0.99
USP54-205ENST00000424265 RASGEF1BQ0VAM2 473 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 HERPUD1Q15011 391 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 C4orf17Q53FE4 359 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 IER5LQ5T953 404 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 ZNF626Q68DY1 528 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 TMEM105Q8N8V8 129 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 STEAP2Q8NFT2 490 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 SNIP1Q8TAD8 396 aaKnown RBP8.87□□□□□ -0.99
USP54-205ENST00000424265 RNASE8Q8TDE3 154 aaKnown RBP8.87□□□□□ -0.99
USP54-205ENST00000424265 DOHHQ9BU89 302 aa8.87□□□□□ -0.99
USP54-205ENST00000424265 HELZP42694 1942 aaKnown RBP8.86□□□□□ -0.99
USP54-205ENST00000424265 A0A0B4J2A0 478 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 ASPDHA6ND91 283 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 TRDCB7Z8K6 153 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 PPIHO43447 177 aaKnown RBP8.86□□□□□ -0.99
USP54-205ENST00000424265 PRICKLE3O43900 615 aaPredicted RBP8.86□□□□□ -0.99
USP54-205ENST00000424265 CA11O75493 328 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 GCGP01275 180 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 OR12D1P0DN82 309 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 GP1BBP13224 206 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 CHRNB4P30926 498 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 UBE2V2Q15819 145 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 CSRP2Q16527 193 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 SAP25Q8TEE9 199 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 TMED6Q8WW62 240 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 TOMM40LQ969M1 308 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 PGAM5Q96HS1 289 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 CLUHP3Q96NS8 147 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 SHPKQ9UHJ6 478 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 NSG1A0A0A6YYJ2 146 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 A0A1W2PPE2 198 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 ANTXRLA6NF34 631 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 ALOX12BO75342 701 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 WNT1P04628 370 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 PRR35P0CG20 571 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 MLC1Q15049 377 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 TRIP6Q15654 476 aaKnown RBP8.86□□□□□ -0.99
USP54-205ENST00000424265 RPS26P11Q5JNZ5 115 aaPredicted RBP8.86□□□□□ -0.99
USP54-205ENST00000424265 ABHD17BQ5VST6 288 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 PTOV1Q86YD1 416 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 SELENOHQ8IZQ5 122 aaKnown RBP8.86□□□□□ -0.99
USP54-205ENST00000424265 D2HGDHQ8N465 521 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 CLEC1AQ8NC01 280 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 OR2AK2Q8NG84 335 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 OR52E4Q8NGH9 312 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 BRIX1Q8TDN6 353 aaKnown RBP8.86□□□□□ -0.99
USP54-205ENST00000424265 DCUN1D4Q92564 292 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 GPR87Q9BY21 358 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 PCYT1BQ9Y5K3 369 aaPredicted RBP8.86□□□□□ -0.99
USP54-205ENST00000424265 MYOFQ9NZM1 2061 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 A0A087WV62 115 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 ELOA3DA6NLF2 546 aaPredicted RBP8.86□□□□□ -0.99
USP54-205ENST00000424265 CLEC3BP05452 202 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 H1F0P07305 194 aaKnown RBP8.86□□□□□ -0.99
USP54-205ENST00000424265 ADCYAP1P18509 176 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 PGCP20142 388 aa8.86□□□□□ -0.99
USP54-205ENST00000424265 WNT5AP41221 380 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms