RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 ING4Q9UNL4 249 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 WIPF3A6NGB9 483 aa10.57□□□□□ -0.72
PTPRN-204ENST00000423636 HCKP08631 526 aa10.57□□□□□ -0.72
PTPRN-204ENST00000423636 GLI4P10075 376 aa10.57□□□□□ -0.72
PTPRN-204ENST00000423636 ERP29P30040 261 aaKnown RBP10.57□□□□□ -0.72
PTPRN-204ENST00000423636 SNU13P55769 128 aaKnown RBP10.57□□□□□ -0.72
PTPRN-204ENST00000423636 ISXQ2M1V0 245 aa10.57□□□□□ -0.72
PTPRN-204ENST00000423636 CDNFQ49AH0 187 aa10.57□□□□□ -0.72
PTPRN-204ENST00000423636 SLC23A3Q6PIS1 610 aa10.57□□□□□ -0.72
PTPRN-204ENST00000423636 RPS19BP1Q86WX3 136 aaKnown RBP10.57□□□□□ -0.72
PTPRN-204ENST00000423636 TNFAIP8L1Q8WVP5 186 aa10.57□□□□□ -0.72
PTPRN-204ENST00000423636 ZNF845Q96IR2 970 aaPredicted RBP10.57□□□□□ -0.72
PTPRN-204ENST00000423636 SLC6A7Q99884 636 aa10.57□□□□□ -0.72
PTPRN-204ENST00000423636 DLL4Q9NR61 685 aa10.57□□□□□ -0.72
PTPRN-204ENST00000423636 R4GMQ9 66 aa10.57□□□□□ -0.72
PTPRN-204ENST00000423636 OR6C76A6NM76 312 aa10.57□□□□□ -0.72
PTPRN-204ENST00000423636 STK17BO94768 372 aa10.57□□□□□ -0.72
PTPRN-204ENST00000423636 CSRP2Q16527 193 aa10.57□□□□□ -0.72
PTPRN-204ENST00000423636 AWAT2Q6E213 333 aa10.57□□□□□ -0.72
PTPRN-204ENST00000423636 MRPL14Q6P1L8 145 aaKnown RBP10.57□□□□□ -0.72
PTPRN-204ENST00000423636 C3orf33Q6P1S2 294 aa10.57□□□□□ -0.72
PTPRN-204ENST00000423636 TMEM81Q6P7N7 255 aa10.57□□□□□ -0.72
PTPRN-204ENST00000423636 ZNF704Q6ZNC4 412 aaPredicted RBP10.57□□□□□ -0.72
PTPRN-204ENST00000423636 C1QL2Q7Z5L3 287 aa10.57□□□□□ -0.72
PTPRN-204ENST00000423636 C20orf196Q8IYI0 205 aa10.57□□□□□ -0.72
PTPRN-204ENST00000423636 OR14L1PQ8NHC6 308 aa10.57□□□□□ -0.72
PTPRN-204ENST00000423636 MFSD8Q8NHS3 518 aa10.57□□□□□ -0.72
PTPRN-204ENST00000423636 SLC22A8Q8TCC7 542 aa10.57□□□□□ -0.72
PTPRN-204ENST00000423636 TMEM41AQ96HV5 264 aa10.57□□□□□ -0.72
PTPRN-204ENST00000423636 TGIF2Q9GZN2 237 aa10.57□□□□□ -0.72
PTPRN-204ENST00000423636 ZCCHC4Q9H5U6 513 aa10.57□□□□□ -0.72
PTPRN-204ENST00000423636 TRAF3IP2O43734 574 aaPredicted RBP10.56□□□□□ -0.72
PTPRN-204ENST00000423636 PMP2P02689 132 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 CELA3AP09093 270 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 COX6A1P12074 109 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 ZNF35P13682 527 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 FAHP16930 419 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 DAP3P51398 398 aaKnown RBP10.56□□□□□ -0.72
PTPRN-204ENST00000423636 Q0VFX4 171 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 KMT5CQ86Y97 462 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 TCTE3Q8IZS6 198 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 MUC20Q8N307 709 aaPredicted RBP10.56□□□□□ -0.72
PTPRN-204ENST00000423636 ESX1Q8N693 406 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 NCKAP5O14513 1909 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 IGLV3-12A0A075B6K2 115 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 A0A0J9YW62 118 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 ANKRD20A5PA0PJZ0 165 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 ACOT7O00154 380 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 MPC2O95563 127 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 CACNA1DQ01668 2161 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 BCL2A1Q16548 175 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 IDO2Q6ZQW0 420 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 GALNTL5Q7Z4T8 443 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 OR8B12Q8NGG6 310 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 NUBPLQ8TB37 319 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 ELMOD3Q96FG2 381 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 SRXN1Q9BYN0 137 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 CHRNA10Q9GZZ6 450 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 IGHV1-45A0A0A0MS14 117 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 LOC100289279A0A1B0GTE1 492 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 C9J4A7 227 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 SDCBPO00560 298 aaPredicted RBP10.56□□□□□ -0.72
PTPRN-204ENST00000423636 TPD52L2O43399 206 aaKnown RBP10.56□□□□□ -0.72
PTPRN-204ENST00000423636 XRCC3O43542 346 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 HTR3BO95264 441 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 H2BFSP57053 126 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 TEX30Q5JUR7 227 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 C5orf24Q7Z6I8 188 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 AKR7LQ8NHP1 331 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 ST8SIA1Q92185 356 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 LRFN5Q96NI6 719 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 ZNF436Q9C0F3 470 aaPredicted RBP10.56□□□□□ -0.72
PTPRN-204ENST00000423636 C1orf198Q9H425 327 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 POFUT1Q9H488 388 aa10.56□□□□□ -0.72
PTPRN-204ENST00000423636 PRMT8Q9NR22 394 aaPredicted RBP10.56□□□□□ -0.72
PTPRN-204ENST00000423636 FAM221AA4D161 298 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 PINLYPA6NC86 204 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 FAM166BA8MTA8 275 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 TNFRSF10AO00220 468 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 SLC17A2O00624 439 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 ANGPTL7O43827 346 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 IGHG1P01857 330 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 IFI6P09912 130 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 GAAP10253 952 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 B4GALT1P15291 398 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 CX3CR1P49238 355 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 TGIF1Q15583 401 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 SLC22A10Q63ZE4 541 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 GLT8D1Q68CQ7 371 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 DHRS13Q6UX07 377 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 KCTD9Q7L273 389 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 PLEKHA1Q9HB21 404 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 KLK13Q9UKR3 277 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 CADP27708 2225 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 SOCS1O15524 211 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 CXCL13O43927 109 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 RAB3DO95716 219 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 ZNF20P17024 532 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 AKR1C4P17516 323 aa10.55□□□□□ -0.72
PTPRN-204ENST00000423636 VAMP1P23763 118 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms