RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 TBCCD1Q9NVR7 557 aa12.87□□□□□ -0.35
USB1-202ENST00000423271 KIF17Q9P2E2 1029 aa12.87□□□□□ -0.35
USB1-202ENST00000423271 STARD10Q9Y365 291 aa12.87□□□□□ -0.35
USB1-202ENST00000423271 ARHGAP32A7KAX9 2087 aa12.86□□□□□ -0.35
USB1-202ENST00000423271 IGLV1-36A0A0B4J1U3 117 aa12.86□□□□□ -0.35
USB1-202ENST00000423271 ERICH4A6NGS2 130 aa12.86□□□□□ -0.35
USB1-202ENST00000423271 SAC3D1A6NKF1 404 aa12.86□□□□□ -0.35
USB1-202ENST00000423271 G3V2T6 193 aa12.86□□□□□ -0.35
USB1-202ENST00000423271 H3BN98 237 aa12.86□□□□□ -0.35
USB1-202ENST00000423271 RER1O15258 196 aa12.86□□□□□ -0.35
USB1-202ENST00000423271 IDH3BO43837 385 aa12.86□□□□□ -0.35
USB1-202ENST00000423271 IGHV2-5P01817 119 aa12.86□□□□□ -0.35
USB1-202ENST00000423271 CD55P08174 381 aa12.86□□□□□ -0.35
USB1-202ENST00000423271 NOS3P29474 1203 aa12.86□□□□□ -0.35
USB1-202ENST00000423271 LIPAP38571 399 aa12.86□□□□□ -0.35
USB1-202ENST00000423271 CENPAP49450 140 aa12.86□□□□□ -0.35
USB1-202ENST00000423271 DAPP51397 102 aa12.86□□□□□ -0.35
USB1-202ENST00000423271 LSM6P62312 80 aaKnown RBP12.86□□□□□ -0.35
USB1-202ENST00000423271 LEG1Q6P5S2 330 aa12.86□□□□□ -0.35
USB1-202ENST00000423271 Q6ZR03 302 aa12.86□□□□□ -0.35
USB1-202ENST00000423271 JAZF1Q86VZ6 243 aa12.86□□□□□ -0.35
USB1-202ENST00000423271 C10orf67Q8IYJ2 551 aa12.86□□□□□ -0.35
USB1-202ENST00000423271 LNX2Q8N448 690 aa12.86□□□□□ -0.35
USB1-202ENST00000423271 IQCF1Q8N6M8 205 aa12.86□□□□□ -0.35
USB1-202ENST00000423271 SDR9C7Q8NEX9 313 aa12.86□□□□□ -0.35
USB1-202ENST00000423271 OR1F12Q8NHA8 337 aa12.86□□□□□ -0.35
USB1-202ENST00000423271 TEX47Q8TBZ9 253 aa12.86□□□□□ -0.35
USB1-202ENST00000423271 CMBLQ96DG6 245 aa12.86□□□□□ -0.35
USB1-202ENST00000423271 TIMD4Q96H15 378 aa12.86□□□□□ -0.35
USB1-202ENST00000423271 NMNAT3Q96T66 252 aa12.86□□□□□ -0.35
USB1-202ENST00000423271 EGLN1Q9GZT9 426 aa12.86□□□□□ -0.35
USB1-202ENST00000423271 GABARAPL1Q9H0R8 117 aa12.86□□□□□ -0.35
USB1-202ENST00000423271 METTL17Q9H7H0 456 aaPredicted RBP12.86□□□□□ -0.35
USB1-202ENST00000423271 S100A14Q9HCY8 104 aa12.86□□□□□ -0.35
USB1-202ENST00000423271 CGGBP1Q9UFW8 167 aaPredicted RBP12.86□□□□□ -0.35
USB1-202ENST00000423271 PURGQ9UJV8 347 aaKnown RBP12.86□□□□□ -0.35
USB1-202ENST00000423271 ZDHHC8Q9ULC8 765 aa12.86□□□□□ -0.35
USB1-202ENST00000423271 POLR1DQ9Y2S0 133 aa12.86□□□□□ -0.35
USB1-202ENST00000423271 LHFPL6Q9Y693 200 aa12.86□□□□□ -0.35
USB1-202ENST00000423271 TRAV20A0A0B4J274 112 aa12.85□□□□□ -0.35
USB1-202ENST00000423271 MITFO75030 526 aaPredicted RBP12.85□□□□□ -0.35
USB1-202ENST00000423271 OSMP13725 252 aa12.85□□□□□ -0.35
USB1-202ENST00000423271 KITLGP21583 273 aa12.85□□□□□ -0.35
USB1-202ENST00000423271 POU1F1P28069 291 aa12.85□□□□□ -0.35
USB1-202ENST00000423271 TNFAIP6P98066 277 aaPredicted RBP12.85□□□□□ -0.35
USB1-202ENST00000423271 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.85□□□□□ -0.35
USB1-202ENST00000423271 CDK5R2Q13319 367 aa12.85□□□□□ -0.35
USB1-202ENST00000423271 KCNMB1Q16558 191 aa12.85□□□□□ -0.35
USB1-202ENST00000423271 ZMAT1Q5H9K5 638 aa12.85□□□□□ -0.35
USB1-202ENST00000423271 ACSM5Q6NUN0 579 aa12.85□□□□□ -0.35
USB1-202ENST00000423271 FAHD2BQ6P2I3 314 aaPredicted RBP12.85□□□□□ -0.35
USB1-202ENST00000423271 CORO6Q6QEF8 472 aa12.85□□□□□ -0.35
USB1-202ENST00000423271 ZDHHC13Q8IUH4 622 aa12.85□□□□□ -0.35
USB1-202ENST00000423271 RFLNBQ8N5W9 214 aa12.85□□□□□ -0.35
USB1-202ENST00000423271 OR2T33Q8NG76 320 aa12.85□□□□□ -0.35
USB1-202ENST00000423271 OR52E2Q8NGJ4 325 aa12.85□□□□□ -0.35
USB1-202ENST00000423271 RAB1CQ92928 201 aa12.85□□□□□ -0.35
USB1-202ENST00000423271 RAB39BQ96DA2 213 aa12.85□□□□□ -0.35
USB1-202ENST00000423271 FAHD2AQ96GK7 314 aa12.85□□□□□ -0.35
USB1-202ENST00000423271 FN3KQ9H479 309 aa12.85□□□□□ -0.35
USB1-202ENST00000423271 G6PC2Q9NQR9 355 aa12.85□□□□□ -0.35
USB1-202ENST00000423271 OAZ3Q9UMX2 235 aa12.85□□□□□ -0.35
USB1-202ENST00000423271 B9D1Q9UPM9 204 aa12.85□□□□□ -0.35
USB1-202ENST00000423271 DYSFO75923 2080 aa12.84□□□□□ -0.35
USB1-202ENST00000423271 ISPDA4D126 451 aa12.84□□□□□ -0.35
USB1-202ENST00000423271 OR6C68A6NDL8 312 aa12.84□□□□□ -0.35
USB1-202ENST00000423271 TCF21O43680 179 aa12.84□□□□□ -0.35
USB1-202ENST00000423271 PLPP2O43688 288 aa12.84□□□□□ -0.35
USB1-202ENST00000423271 PNPP00491 289 aa12.84□□□□□ -0.35
USB1-202ENST00000423271 RENP00797 406 aa12.84□□□□□ -0.35
USB1-202ENST00000423271 AVPP01185 164 aa12.84□□□□□ -0.35
USB1-202ENST00000423271 CRABP1P29762 137 aa12.84□□□□□ -0.35
USB1-202ENST00000423271 HIST1H3AP68431 136 aa12.84□□□□□ -0.35
USB1-202ENST00000423271 HLXQ14774 488 aaPredicted RBP12.84□□□□□ -0.35
USB1-202ENST00000423271 HIST2H3PS2Q5TEC6 136 aa12.84□□□□□ -0.35
USB1-202ENST00000423271 DNM1P34Q6PK57 102 aa12.84□□□□□ -0.35
USB1-202ENST00000423271 C1orf229Q6ZS94 237 aaPredicted RBP12.84□□□□□ -0.35
USB1-202ENST00000423271 HIST2H3AQ71DI3 136 aa12.84□□□□□ -0.35
USB1-202ENST00000423271 OR6V1Q8N148 313 aa12.84□□□□□ -0.35
USB1-202ENST00000423271 OR2Z1Q8NG97 314 aa12.84□□□□□ -0.35
USB1-202ENST00000423271 DNAJC9Q8WXX5 260 aa12.84□□□□□ -0.35
USB1-202ENST00000423271 DIRC2Q96SL1 478 aa12.84□□□□□ -0.35
USB1-202ENST00000423271 GAL3ST1Q99999 423 aa12.84□□□□□ -0.35
USB1-202ENST00000423271 SRA1Q9HD15 236 aaKnown RBP12.84□□□□□ -0.35
USB1-202ENST00000423271 RPRD1BQ9NQG5 326 aaKnown RBP12.84□□□□□ -0.35
USB1-202ENST00000423271 PAPOLBQ9NRJ5 636 aaKnown RBP12.84□□□□□ -0.35
USB1-202ENST00000423271 PTTG3PQ9NZH4 202 aa12.84□□□□□ -0.35
USB1-202ENST00000423271 BAIAP2Q9UQB8 552 aa12.84□□□□□ -0.35
USB1-202ENST00000423271 GRK5P34947 590 aa12.83□□□□□ -0.36
USB1-202ENST00000423271 GINS1Q14691 196 aa12.83□□□□□ -0.36
USB1-202ENST00000423271 ZNF362Q5T0B9 420 aaPredicted RBP12.83□□□□□ -0.36
USB1-202ENST00000423271 LIPNQ5VXI9 398 aa12.83□□□□□ -0.36
USB1-202ENST00000423271 LINC00346Q8IVM7 164 aa12.83□□□□□ -0.36
USB1-202ENST00000423271 OR5AS1Q8N127 324 aa12.83□□□□□ -0.36
USB1-202ENST00000423271 CYB561A3Q8NBI2 242 aa12.83□□□□□ -0.36
USB1-202ENST00000423271 SLC26A10Q8NG04 563 aa12.83□□□□□ -0.36
USB1-202ENST00000423271 HAVCR1Q96D42 359 aa12.83□□□□□ -0.36
USB1-202ENST00000423271 DDOQ99489 341 aa12.83□□□□□ -0.36
USB1-202ENST00000423271 COQ7Q99807 217 aa12.83□□□□□ -0.36
USB1-202ENST00000423271 KRT84Q9NSB2 600 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms