RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 KRR1Q13601 381 aaKnown RBP6.73□□□□□ -1.33
VIM-202ENST00000421459 TRAM2Q15035 370 aa6.73□□□□□ -1.33
VIM-202ENST00000421459 ZBED5Q49AG3 693 aa6.73□□□□□ -1.33
VIM-202ENST00000421459 FAM205BPQ63HN1 556 aa6.73□□□□□ -1.33
VIM-202ENST00000421459 OLFML2AQ68BL7 652 aa6.73□□□□□ -1.33
VIM-202ENST00000421459 ASPHD2Q6ICH7 369 aa6.73□□□□□ -1.33
VIM-202ENST00000421459 C17orf107Q6ZR85 190 aa6.73□□□□□ -1.33
VIM-202ENST00000421459 MBOAT2Q6ZWT7 520 aa6.73□□□□□ -1.33
VIM-202ENST00000421459 GLB1L2Q8IW92 636 aa6.73□□□□□ -1.33
VIM-202ENST00000421459 FGFRL1Q8N441 504 aa6.73□□□□□ -1.33
VIM-202ENST00000421459 OR8J3Q8NGG0 315 aa6.73□□□□□ -1.33
VIM-202ENST00000421459 OR8B3Q8NGG8 313 aa6.73□□□□□ -1.33
VIM-202ENST00000421459 OR13G1Q8NGZ3 307 aa6.73□□□□□ -1.33
VIM-202ENST00000421459 FNDC8Q8TC99 324 aa6.73□□□□□ -1.33
VIM-202ENST00000421459 MAGEB18Q96M61 343 aa6.73□□□□□ -1.33
VIM-202ENST00000421459 OR8B2Q96RD0 313 aa6.73□□□□□ -1.33
VIM-202ENST00000421459 TBX15Q96SF7 602 aa6.73□□□□□ -1.33
VIM-202ENST00000421459 PKP2Q99959 881 aa6.73□□□□□ -1.33
VIM-202ENST00000421459 CITED1Q99966 193 aa6.73□□□□□ -1.33
VIM-202ENST00000421459 NUAK2Q9H093 628 aa6.73□□□□□ -1.33
VIM-202ENST00000421459 PRDM13Q9H4Q3 707 aa6.73□□□□□ -1.33
VIM-202ENST00000421459 BEX1Q9HBH7 125 aa6.73□□□□□ -1.33
VIM-202ENST00000421459 CLN8Q9UBY8 286 aa6.73□□□□□ -1.33
VIM-202ENST00000421459 RPS6KA6Q9UK32 745 aa6.73□□□□□ -1.33
VIM-202ENST00000421459 IER3IP1Q9Y5U9 82 aa6.73□□□□□ -1.33
VIM-202ENST00000421459 LHFPL6Q9Y693 200 aa6.73□□□□□ -1.33
VIM-202ENST00000421459 A0A0U1RQK1 487 aa6.72□□□□□ -1.33
VIM-202ENST00000421459 ELOVL7A1L3X0 281 aa6.72□□□□□ -1.33
VIM-202ENST00000421459 IQCF6A8MYZ5 107 aa6.72□□□□□ -1.33
VIM-202ENST00000421459 C3orf80F5H4A9 247 aa6.72□□□□□ -1.33
VIM-202ENST00000421459 PTP4A3O75365 173 aa6.72□□□□□ -1.33
VIM-202ENST00000421459 KHDRBS3O75525 346 aaKnown RBP6.72□□□□□ -1.33
VIM-202ENST00000421459 ZNF682O95780 498 aa6.72□□□□□ -1.33
VIM-202ENST00000421459 TSPAN15O95858 294 aa6.72□□□□□ -1.33
VIM-202ENST00000421459 IFNA14P01570 189 aa6.72□□□□□ -1.33
VIM-202ENST00000421459 CRYBA1P05813 215 aa6.72□□□□□ -1.33
VIM-202ENST00000421459 MMP9P14780 707 aa6.72□□□□□ -1.33
VIM-202ENST00000421459 TUBG1P23258 451 aa6.72□□□□□ -1.33
VIM-202ENST00000421459 CFHR2P36980 270 aa6.72□□□□□ -1.33
VIM-202ENST00000421459 HIST1H3AP68431 136 aa6.72□□□□□ -1.33
VIM-202ENST00000421459 GK2Q14410 553 aaPredicted RBP6.72□□□□□ -1.33
VIM-202ENST00000421459 CLEC12AQ5QGZ9 265 aa6.72□□□□□ -1.33
VIM-202ENST00000421459 HIST2H3PS2Q5TEC6 136 aa6.72□□□□□ -1.33
VIM-202ENST00000421459 GPR157Q5UAW9 335 aa6.72□□□□□ -1.33
VIM-202ENST00000421459 ERICH5Q6P6B1 374 aa6.72□□□□□ -1.33
VIM-202ENST00000421459 CFAP77Q6ZQR2 320 aa6.72□□□□□ -1.33
VIM-202ENST00000421459 TMPRSS11FQ6ZWK6 438 aa6.72□□□□□ -1.33
VIM-202ENST00000421459 HIST2H3AQ71DI3 136 aa6.72□□□□□ -1.33
VIM-202ENST00000421459 LINC00346Q8IVM7 164 aa6.72□□□□□ -1.33
VIM-202ENST00000421459 OFCC1Q8IZS5 231 aa6.72□□□□□ -1.33
VIM-202ENST00000421459 PCYOX1LQ8NBM8 494 aa6.72□□□□□ -1.33
VIM-202ENST00000421459 OR2T12Q8NG77 320 aa6.72□□□□□ -1.33
VIM-202ENST00000421459 OR4F5Q8NH21 305 aa6.72□□□□□ -1.33
VIM-202ENST00000421459 FAM110DQ8TAY7 271 aaPredicted RBP6.72□□□□□ -1.33
VIM-202ENST00000421459 ACOT11Q8WXI4 607 aaPredicted RBP6.72□□□□□ -1.33
VIM-202ENST00000421459 SLCO4A1Q96BD0 722 aa6.72□□□□□ -1.33
VIM-202ENST00000421459 PLEKHA8Q96JA3 519 aa6.72□□□□□ -1.33
VIM-202ENST00000421459 TECTBQ96PL2 329 aa6.72□□□□□ -1.33
VIM-202ENST00000421459 SH3GL1Q99961 368 aa6.72□□□□□ -1.33
VIM-202ENST00000421459 RBM4BQ9BQ04 359 aaKnown RBP6.72□□□□□ -1.33
VIM-202ENST00000421459 SEMA6AQ9H2E6 1030 aa6.72□□□□□ -1.33
VIM-202ENST00000421459 MMADHCQ9H3L0 296 aaPredicted RBP6.72□□□□□ -1.33
VIM-202ENST00000421459 NMNAT1Q9HAN9 279 aaPredicted RBP6.72□□□□□ -1.33
VIM-202ENST00000421459 SMURF1Q9HCE7 757 aa6.72□□□□□ -1.33
VIM-202ENST00000421459 SRA1Q9HD15 236 aaKnown RBP6.72□□□□□ -1.33
VIM-202ENST00000421459 TUBG2Q9NRH3 451 aa6.72□□□□□ -1.33
VIM-202ENST00000421459 TMEM100Q9NV29 134 aa6.72□□□□□ -1.33
VIM-202ENST00000421459 VSX1Q9NZR4 365 aaPredicted RBP6.72□□□□□ -1.33
VIM-202ENST00000421459 KMT2CQ8NEZ4 4911 aaKnown RBP6.72□□□□□ -1.33
VIM-202ENST00000421459 WNK2Q9Y3S1 2297 aa6.71□□□□□ -1.33
VIM-202ENST00000421459 A0A0G2JK05 382 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 A0A1B0GW55 424 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 CLPSL1A2RUU4 121 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 LRRC30A6NM36 301 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 F5H5K5 113 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 TOX4O94842 621 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 DIRAS1O95057 198 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 SERPINA1P01009 418 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 IFNW1P05000 195 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 VIMP08670 466 aaKnown RBP6.71□□□□□ -1.34
VIM-202ENST00000421459 DUX4L2P0CJ85 424 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 DUX4L3P0CJ86 424 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 DUX4L4P0CJ87 422 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 DUX4L5P0CJ88 424 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 DUX4L6P0CJ89 424 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 DUX4L7P0CJ90 424 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 NCK1P16333 377 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 CA6P23280 308 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 PSMB10P40306 273 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 RAD23AP54725 363 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 DLX1P56177 255 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 LSM6P62312 80 aaKnown RBP6.71□□□□□ -1.34
VIM-202ENST00000421459 ARF6P62330 175 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 SEC23BQ15437 767 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 ZNF181Q2M3W8 571 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 METTL21CQ5VZV1 264 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 CGB2Q6NT52 195 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 DUX4L9Q6RFH8 374 aaPredicted RBP6.71□□□□□ -1.34
VIM-202ENST00000421459 DCDC5Q6ZRR9 648 aa6.71□□□□□ -1.34
VIM-202ENST00000421459 ZNF826PQ6ZT77 177 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms