RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 GDI2P50395 445 aaKnown RBP12.44□□□□□ -0.42
SHMT1P1-201ENST00000419974 TUBA1BP68363 451 aa12.44□□□□□ -0.42
SHMT1P1-201ENST00000419974 SRSF1Q07955 248 aaKnown RBP eCLIP12.44□□□□□ -0.42
SHMT1P1-201ENST00000419974 TBRG1Q3YBR2 411 aa12.44□□□□□ -0.42
SHMT1P1-201ENST00000419974 OTPQ5XKR4 325 aa12.44□□□□□ -0.42
SHMT1P1-201ENST00000419974 TMEM53Q6P2H8 277 aa12.44□□□□□ -0.42
SHMT1P1-201ENST00000419974 COLCA1Q6ZS62 124 aa12.44□□□□□ -0.42
SHMT1P1-201ENST00000419974 TUBA1AQ71U36 451 aa12.44□□□□□ -0.42
SHMT1P1-201ENST00000419974 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.44□□□□□ -0.42
SHMT1P1-201ENST00000419974 ELMOD2Q8IZ81 293 aa12.44□□□□□ -0.42
SHMT1P1-201ENST00000419974 PRSS35Q8N3Z0 413 aa12.44□□□□□ -0.42
SHMT1P1-201ENST00000419974 OR5AK2Q8NH90 309 aa12.44□□□□□ -0.42
SHMT1P1-201ENST00000419974 ABHD4Q8TB40 342 aa12.44□□□□□ -0.42
SHMT1P1-201ENST00000419974 DOCK7Q96N67 2140 aa12.44□□□□□ -0.42
SHMT1P1-201ENST00000419974 CENPMQ9NSP4 180 aa12.44□□□□□ -0.42
SHMT1P1-201ENST00000419974 PLEK2Q9NYT0 353 aa12.44□□□□□ -0.42
SHMT1P1-201ENST00000419974 ZNF391Q9UJN7 358 aa12.44□□□□□ -0.42
SHMT1P1-201ENST00000419974 SLC5A6Q9Y289 635 aa12.44□□□□□ -0.42
SHMT1P1-201ENST00000419974 USP9XQ93008 2570 aaPredicted RBP12.44□□□□□ -0.42
SHMT1P1-201ENST00000419974 TRBV5-5A0A0J9YX44 114 aa12.43□□□□□ -0.42
SHMT1P1-201ENST00000419974 A0A0U1RQV5 110 aa12.43□□□□□ -0.42
SHMT1P1-201ENST00000419974 LOC110117498-PIK3R3F6TDL0 507 aa12.43□□□□□ -0.42
SHMT1P1-201ENST00000419974 PSMD9O00233 223 aa12.43□□□□□ -0.42
SHMT1P1-201ENST00000419974 RAF1P04049 648 aa12.43□□□□□ -0.42
SHMT1P1-201ENST00000419974 UBCP0CG48 685 aaKnown RBP12.43□□□□□ -0.42
SHMT1P1-201ENST00000419974 CCL1P22362 96 aa12.43□□□□□ -0.42
SHMT1P1-201ENST00000419974 HSD11B1P28845 292 aa12.43□□□□□ -0.42
SHMT1P1-201ENST00000419974 RPS25P62851 125 aaKnown RBP12.43□□□□□ -0.42
SHMT1P1-201ENST00000419974 FABP5Q01469 135 aa12.43□□□□□ -0.42
SHMT1P1-201ENST00000419974 FBXL19-AS1Q494R0 122 aa12.43□□□□□ -0.42
SHMT1P1-201ENST00000419974 WDR38Q5JTN6 314 aa12.43□□□□□ -0.42
SHMT1P1-201ENST00000419974 TMEM244Q5VVB8 128 aa12.43□□□□□ -0.42
SHMT1P1-201ENST00000419974 ZNF474Q6S9Z5 364 aaPredicted RBP12.43□□□□□ -0.42
SHMT1P1-201ENST00000419974 ARL9Q6T311 187 aa12.43□□□□□ -0.42
SHMT1P1-201ENST00000419974 ZNF704Q6ZNC4 412 aaPredicted RBP12.43□□□□□ -0.42
SHMT1P1-201ENST00000419974 TMEM91Q6ZNR0 172 aa12.43□□□□□ -0.42
SHMT1P1-201ENST00000419974 OR52H1Q8NGJ2 320 aa12.43□□□□□ -0.42
SHMT1P1-201ENST00000419974 FGFBP3Q8TAT2 258 aa12.43□□□□□ -0.42
SHMT1P1-201ENST00000419974 HSD17B8Q92506 261 aa12.43□□□□□ -0.42
SHMT1P1-201ENST00000419974 MED18Q9BUE0 208 aa12.43□□□□□ -0.42
SHMT1P1-201ENST00000419974 NAA50Q9GZZ1 169 aaKnown RBP12.43□□□□□ -0.42
SHMT1P1-201ENST00000419974 COMMD4Q9H0A8 199 aa12.43□□□□□ -0.42
SHMT1P1-201ENST00000419974 OR51E2Q9H255 320 aa12.43□□□□□ -0.42
SHMT1P1-201ENST00000419974 TXNL4BQ9NX01 149 aaKnown RBP12.43□□□□□ -0.42
SHMT1P1-201ENST00000419974 CRNNQ9UBG3 495 aaPredicted RBP12.43□□□□□ -0.42
SHMT1P1-201ENST00000419974 OR52A1Q9UKL2 312 aa12.43□□□□□ -0.42
SHMT1P1-201ENST00000419974 GSTK1Q9Y2Q3 226 aa12.43□□□□□ -0.42
SHMT1P1-201ENST00000419974 GRIP1Q9Y3R0 1128 aa12.43□□□□□ -0.42
SHMT1P1-201ENST00000419974 DOPEY2Q9Y3R5 2298 aa12.43□□□□□ -0.42
SHMT1P1-201ENST00000419974 USP9YO00507 2555 aaPredicted RBP12.43□□□□□ -0.42
SHMT1P1-201ENST00000419974 ARHGAP21Q5T5U3 1957 aa12.42□□□□□ -0.42
SHMT1P1-201ENST00000419974 DOK2O60496 412 aa12.42□□□□□ -0.42
SHMT1P1-201ENST00000419974 TMEM127O75204 238 aa12.42□□□□□ -0.42
SHMT1P1-201ENST00000419974 RGS9O75916 674 aaPredicted RBP12.42□□□□□ -0.42
SHMT1P1-201ENST00000419974 RPP14O95059 124 aaKnown RBP12.42□□□□□ -0.42
SHMT1P1-201ENST00000419974 IGKV3-15P01624 115 aa12.42□□□□□ -0.42
SHMT1P1-201ENST00000419974 SERPINA5P05154 406 aa12.42□□□□□ -0.42
SHMT1P1-201ENST00000419974 PSMB10P40306 273 aa12.42□□□□□ -0.42
SHMT1P1-201ENST00000419974 KIR3DL2P43630 455 aa12.42□□□□□ -0.42
SHMT1P1-201ENST00000419974 TPTEP56180 551 aa12.42□□□□□ -0.42
SHMT1P1-201ENST00000419974 RAB1AP62820 205 aa12.42□□□□□ -0.42
SHMT1P1-201ENST00000419974 TAF13Q15543 124 aa12.42□□□□□ -0.42
SHMT1P1-201ENST00000419974 GSG1Q2KHT4 349 aa12.42□□□□□ -0.42
SHMT1P1-201ENST00000419974 PABPC1L2AQ5JQF8 200 aa12.42□□□□□ -0.42
SHMT1P1-201ENST00000419974 TIMM23BQ5SRD1 257 aa12.42□□□□□ -0.42
SHMT1P1-201ENST00000419974 MTFR2Q6P444 385 aa12.42□□□□□ -0.42
SHMT1P1-201ENST00000419974 USP43Q70EL4 1123 aa12.42□□□□□ -0.42
SHMT1P1-201ENST00000419974 ZFP41Q8N8Y5 198 aa12.42□□□□□ -0.42
SHMT1P1-201ENST00000419974 GPR148Q8TDV2 347 aa12.42□□□□□ -0.42
SHMT1P1-201ENST00000419974 HTRA1Q92743 480 aa12.42□□□□□ -0.42
SHMT1P1-201ENST00000419974 TTTY10Q9BZA0 68 aa12.42□□□□□ -0.42
SHMT1P1-201ENST00000419974 OPN3Q9H1Y3 402 aaPredicted RBP12.42□□□□□ -0.42
SHMT1P1-201ENST00000419974 AMDHD2Q9Y303 409 aa12.42□□□□□ -0.42
SHMT1P1-201ENST00000419974 PHF3Q92576 2039 aaKnown RBP12.42□□□□□ -0.42
SHMT1P1-201ENST00000419974 POLEQ07864 2286 aa12.42□□□□□ -0.42
SHMT1P1-201ENST00000419974 ESPL1Q14674 2120 aa12.42□□□□□ -0.42
SHMT1P1-201ENST00000419974 A0A096LPE4 126 aa12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 A0A1B0GUH1 482 aa12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 A0A1W2PPZ6 126 aa12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 LOC390937A0A1W2PQ73 354 aa12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 OR5H1A6NKK0 313 aa12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 DHRS7CA6NNS2 312 aa12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 M0R135 149 aa12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 ATE1O95260 518 aa12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 UCHL1P09936 223 aa12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 ACSM4P0C7M7 580 aa12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 CBR1P16152 277 aa12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 ACHEP22303 614 aa12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 GNLYP22749 145 aa12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 MAPK3P27361 379 aaPredicted RBP12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 CX3CR1P49238 355 aa12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 UBE2NP61088 152 aaKnown RBP12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 SLC3A1Q07837 685 aa12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 MFGE8Q08431 387 aaPredicted RBP12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 SLC25A35Q3KQZ1 300 aa12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 Q499Y3 187 aa12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 ACSM3Q53FZ2 586 aa12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 ZNF774Q6NX45 483 aa12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 STAC2Q6ZMT1 411 aa12.41□□□□□ -0.42
SHMT1P1-201ENST00000419974 LINC00299Q6ZSB3 139 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms