RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 COG8Q96MW5 612 aa15.95■□□□□ 0.14
PTCD3-204ENST00000418628 RDH12Q96NR8 316 aa15.95■□□□□ 0.14
PTCD3-204ENST00000418628 IL4I1Q96RQ9 567 aa15.95■□□□□ 0.14
PTCD3-204ENST00000418628 TMUB1Q9BVT8 246 aa15.95■□□□□ 0.14
PTCD3-204ENST00000418628 KLHDC2Q9Y2U9 406 aa15.95■□□□□ 0.14
PTCD3-204ENST00000418628 STARD10Q9Y365 291 aa15.95■□□□□ 0.14
PTCD3-204ENST00000418628 MTORP42345 2549 aa15.94■□□□□ 0.14
PTCD3-204ENST00000418628 SLC22A31A6NKX4 558 aa15.94■□□□□ 0.14
PTCD3-204ENST00000418628 M0R135 149 aa15.94■□□□□ 0.14
PTCD3-204ENST00000418628 F12P00748 615 aaPredicted RBP15.94■□□□□ 0.14
PTCD3-204ENST00000418628 GABRB1P18505 474 aa15.94■□□□□ 0.14
PTCD3-204ENST00000418628 ALOX5APP20292 161 aa15.94■□□□□ 0.14
PTCD3-204ENST00000418628 KITLGP21583 273 aa15.94■□□□□ 0.14
PTCD3-204ENST00000418628 PEX2P28328 305 aa15.94■□□□□ 0.14
PTCD3-204ENST00000418628 NAA10P41227 235 aaPredicted RBP15.94■□□□□ 0.14
PTCD3-204ENST00000418628 ALDH3B1P43353 468 aa15.94■□□□□ 0.14
PTCD3-204ENST00000418628 MMP15P51511 669 aa15.94■□□□□ 0.14
PTCD3-204ENST00000418628 CDC42P60953 191 aa15.94■□□□□ 0.14
PTCD3-204ENST00000418628 EIF2B1Q14232 305 aaKnown RBP15.94■□□□□ 0.14
PTCD3-204ENST00000418628 MAD2L1BPQ15013 274 aaPredicted RBP15.94■□□□□ 0.14
PTCD3-204ENST00000418628 ZIK1Q3SY52 487 aaPredicted RBP15.94■□□□□ 0.14
PTCD3-204ENST00000418628 SLC16A9Q7RTY1 509 aa15.94■□□□□ 0.14
PTCD3-204ENST00000418628 FAM81AQ8TBF8 368 aa15.94■□□□□ 0.14
PTCD3-204ENST00000418628 TRUB1Q8WWH5 349 aaKnown RBP15.94■□□□□ 0.14
PTCD3-204ENST00000418628 ZNF799Q96GE5 643 aa15.94■□□□□ 0.14
PTCD3-204ENST00000418628 KCNJ15Q99712 375 aa15.94■□□□□ 0.14
PTCD3-204ENST00000418628 YIPF3Q9GZM5 350 aa15.94■□□□□ 0.14
PTCD3-204ENST00000418628 ADGRL4Q9HBW9 690 aa15.94■□□□□ 0.14
PTCD3-204ENST00000418628 C8orf4Q9NR00 106 aa15.94■□□□□ 0.14
PTCD3-204ENST00000418628 SLCO1C1Q9NYB5 712 aa15.94■□□□□ 0.14
PTCD3-204ENST00000418628 DUSP13Q9UII6 198 aa15.94■□□□□ 0.14
PTCD3-204ENST00000418628 CSPG4Q6UVK1 2322 aa15.94■□□□□ 0.14
PTCD3-204ENST00000418628 SLC16A6O15403 523 aa15.93■□□□□ 0.14
PTCD3-204ENST00000418628 LYNP07948 512 aa15.93■□□□□ 0.14
PTCD3-204ENST00000418628 ADH4P08319 380 aa15.93■□□□□ 0.14
PTCD3-204ENST00000418628 ADRA2AP08913 450 aa15.93■□□□□ 0.14
PTCD3-204ENST00000418628 NUDT6P53370 316 aa15.93■□□□□ 0.14
PTCD3-204ENST00000418628 TPTEP56180 551 aa15.93■□□□□ 0.14
PTCD3-204ENST00000418628 RPS7P62081 194 aaKnown RBP15.93■□□□□ 0.14
PTCD3-204ENST00000418628 SNRPGP62308 76 aaKnown RBP15.93■□□□□ 0.14
PTCD3-204ENST00000418628 GRB2P62993 217 aaKnown RBP15.93■□□□□ 0.14
PTCD3-204ENST00000418628 PSG7Q13046 419 aa15.93■□□□□ 0.14
PTCD3-204ENST00000418628 TRIP10Q15642 601 aa15.93■□□□□ 0.14
PTCD3-204ENST00000418628 OGFRL1Q5TC84 451 aaPredicted RBP15.93■□□□□ 0.14
PTCD3-204ENST00000418628 DRAM2Q6UX65 266 aa15.93■□□□□ 0.14
PTCD3-204ENST00000418628 PRSS45Q7RTY3 260 aa15.93■□□□□ 0.14
PTCD3-204ENST00000418628 ZCCHC24Q8N2G6 241 aaKnown RBP15.93■□□□□ 0.14
PTCD3-204ENST00000418628 PACRGLQ8N7B6 248 aa15.93■□□□□ 0.14
PTCD3-204ENST00000418628 Q96MF0 132 aa15.93■□□□□ 0.14
PTCD3-204ENST00000418628 DYNLRB1Q9NP97 96 aa15.93■□□□□ 0.14
PTCD3-204ENST00000418628 TAAR3PQ9P1P4 343 aa15.93■□□□□ 0.14
PTCD3-204ENST00000418628 CGGBP1Q9UFW8 167 aaPredicted RBP15.93■□□□□ 0.14
PTCD3-204ENST00000418628 MALRD1Q5VYJ5 2156 aa15.92■□□□□ 0.14
PTCD3-204ENST00000418628 A0A1W2PPW3 197 aa15.92■□□□□ 0.14
PTCD3-204ENST00000418628 PRR32B1ATL7 298 aa15.92■□□□□ 0.14
PTCD3-204ENST00000418628 F5H5K5 113 aa15.92■□□□□ 0.14
PTCD3-204ENST00000418628 GCH1P30793 250 aa15.92■□□□□ 0.14
PTCD3-204ENST00000418628 HTR1FP30939 366 aa15.92■□□□□ 0.14
PTCD3-204ENST00000418628 ALKBH6Q3KRA9 238 aa15.92■□□□□ 0.14
PTCD3-204ENST00000418628 NAA40Q86UY6 237 aa15.92■□□□□ 0.14
PTCD3-204ENST00000418628 GTF3AQ92664 365 aaKnown RBP15.92■□□□□ 0.14
PTCD3-204ENST00000418628 SPTSSAQ969W0 71 aa15.92■□□□□ 0.14
PTCD3-204ENST00000418628 ZNF582Q96NG8 517 aaPredicted RBP15.92■□□□□ 0.14
PTCD3-204ENST00000418628 CNN2Q99439 309 aaKnown RBP15.92■□□□□ 0.14
PTCD3-204ENST00000418628 COPS4Q9BT78 406 aa15.92■□□□□ 0.14
PTCD3-204ENST00000418628 RAB1BQ9H0U4 201 aa15.92■□□□□ 0.14
PTCD3-204ENST00000418628 MS4A5Q9H3V2 200 aa15.92■□□□□ 0.14
PTCD3-204ENST00000418628 DCLRE1BQ9H816 532 aa15.92■□□□□ 0.14
PTCD3-204ENST00000418628 SMPD3Q9NY59 655 aaPredicted RBP15.92■□□□□ 0.14
PTCD3-204ENST00000418628 WARS2Q9UGM6 360 aaKnown RBP15.92■□□□□ 0.14
PTCD3-204ENST00000418628 COPS3Q9UNS2 423 aa15.92■□□□□ 0.14
PTCD3-204ENST00000418628 NSD1Q96L73 2696 aaPredicted RBP15.92■□□□□ 0.14
PTCD3-204ENST00000418628 A0A096LNT2 108 aa15.91■□□□□ 0.14
PTCD3-204ENST00000418628 C17orf100A8MU93 164 aa15.91■□□□□ 0.14
PTCD3-204ENST00000418628 NCR1O76036 304 aa15.91■□□□□ 0.14
PTCD3-204ENST00000418628 LY6HO94772 140 aa15.91■□□□□ 0.14
PTCD3-204ENST00000418628 RAC2P15153 192 aa15.91■□□□□ 0.14
PTCD3-204ENST00000418628 SELENOVP59797 346 aa15.91■□□□□ 0.14
PTCD3-204ENST00000418628 TMED1Q13445 227 aa15.91■□□□□ 0.14
PTCD3-204ENST00000418628 CLEC12BQ2HXU8 276 aa15.91■□□□□ 0.14
PTCD3-204ENST00000418628 SNAI3Q3KNW1 292 aa15.91■□□□□ 0.14
PTCD3-204ENST00000418628 LPCAT4Q643R3 524 aa15.91■□□□□ 0.14
PTCD3-204ENST00000418628 RFLNBQ8N5W9 214 aa15.91■□□□□ 0.14
PTCD3-204ENST00000418628 ZNF525Q8N782 197 aa15.91■□□□□ 0.14
PTCD3-204ENST00000418628 OR5L1Q8NGL2 311 aa15.91■□□□□ 0.14
PTCD3-204ENST00000418628 NEU4Q8WWR8 484 aaPredicted RBP15.91■□□□□ 0.14
PTCD3-204ENST00000418628 UBE2FQ969M7 185 aa15.91■□□□□ 0.14
PTCD3-204ENST00000418628 HAVCR1Q96D42 359 aa15.91■□□□□ 0.14
PTCD3-204ENST00000418628 VRK1Q99986 396 aaPredicted RBP15.91■□□□□ 0.14
PTCD3-204ENST00000418628 MYOZ1Q9NP98 299 aaPredicted RBP15.91■□□□□ 0.14
PTCD3-204ENST00000418628 FAM118AQ9NWS6 357 aa15.91■□□□□ 0.14
PTCD3-204ENST00000418628 NKIRAS2Q9NYR9 191 aa15.91■□□□□ 0.14
PTCD3-204ENST00000418628 DNAJC27Q9NZQ0 273 aa15.91■□□□□ 0.14
PTCD3-204ENST00000418628 PURGQ9UJV8 347 aaKnown RBP15.91■□□□□ 0.14
PTCD3-204ENST00000418628 DOCK11Q5JSL3 2073 aa15.9■□□□□ 0.14
PTCD3-204ENST00000418628 A0A1B0GWJ7 208 aa15.9■□□□□ 0.14
PTCD3-204ENST00000418628 C5orf63A6NC05 138 aa15.9■□□□□ 0.14
PTCD3-204ENST00000418628 ZSCAN5BA6NJL1 495 aa15.9■□□□□ 0.14
PTCD3-204ENST00000418628 SSX4O60224 188 aa15.9■□□□□ 0.14
PTCD3-204ENST00000418628 MRPL3P09001 348 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms