RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 FLT3LGP49771 235 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 BTN3A2P78410 334 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 RAB32Q13637 225 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 SLC22A6Q4U2R8 563 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 HOGA1Q86XE5 327 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 RAB42Q8N4Z0 105 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 CDRT4Q8N9R6 151 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 MARCH1Q8TCQ1 289 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 CYB5D2Q8WUJ1 264 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 PTX4Q96A99 478 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 MUCL1Q96DR8 90 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 MRGPRX3Q96LB0 322 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 STACQ99469 402 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 MRPL37Q9BZE1 423 aaKnown RBP7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 WDR76Q9H967 626 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 SLC2A4RGQ9NR83 387 aa7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 PRRC2BQ5JSZ5 2229 aaKnown RBP7.2□□□□□ -1.26
HMGXB4-202ENST00000418170 MPDZO75970 2070 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 ELOA3CA0A087WX78 387 aaPredicted RBP7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 WIPF3A6NGB9 483 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 ZNF587BE7ETH6 402 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 CLDN4O14493 209 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 PPP1R2P9O14990 202 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 JTBO76095 146 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 TBPP20226 339 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 CST5P28325 142 aaPredicted RBP7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 CRABP1P29762 137 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 ZNF84P51523 738 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 FAM3AP98173 230 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 DPTQ07507 201 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 ZNF260Q3ZCT1 412 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 KHDC3LQ587J8 217 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 KIRREL2Q6UWL6 708 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 SPNS3Q6ZMD2 512 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 MAMDC2Q7Z304 686 aaPredicted RBP7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 ZAR1Q86SH2 424 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 ST7LQ8TDW4 575 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 KXD1Q9BQD3 176 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 EIF5A2Q9GZV4 153 aaKnown RBP7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 TWSG1Q9GZX9 223 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 SLC35B3Q9H1N7 401 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 FAM86C1Q9NVL1 165 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 DNAJB12Q9NXW2 375 aaKnown RBP7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 FANCMQ8IYD8 2048 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 HIST1H2BKO60814 126 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 HIST1H2BJP06899 126 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 SOD3P08294 240 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 C6P13671 934 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 HIST1H2BOP23527 126 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 HIST1H2BBP33778 126 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 EMDP50402 254 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 HIST1H2BDP58876 126 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 PRPS1P60891 318 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 HIST1H2BCP62807 126 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 IL15RAQ13261 267 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 CCINQ13939 588 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 ERV3-1Q14264 604 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 HIST2H2BEQ16778 126 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 C14orf28Q4W4Y0 310 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 TTLL10Q6ZVT0 673 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 OR4N5Q8IXE1 308 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 OR6N2Q8NGY6 317 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 CD300LFQ8TDQ1 290 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 SLC25A43Q8WUT9 341 aaPredicted RBP7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 HIST1H2BHQ93079 126 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 CMKLR1Q99788 373 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 HIST1H2BNQ99877 126 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 HIST1H2BMQ99879 126 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 GPR61Q9BZJ8 451 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 SLC26A1Q9H2B4 701 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 KCNJ16Q9NPI9 418 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 TM7SF3Q9NS93 570 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 CKLFQ9UBR5 152 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 CGGBP1Q9UFW8 167 aaPredicted RBP7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 LAMA1P25391 3075 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 OR5H15A6NDH6 313 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 OR5H1A6NKK0 313 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 RAB27BO00194 218 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 IFNA6P05013 189 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 SLC35G4P0C7Q5 338 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 THBS4P35443 961 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 RAB28P51157 221 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 NUTF2P61970 127 aaKnown RBP7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 ZNF529Q6P280 563 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 MTSS1LQ765P7 747 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 DPY19L4Q7Z388 723 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 POC1AQ8NBT0 407 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 OR6X1Q8NH79 312 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 NTNG2Q96CW9 530 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 OR10C1Q96KK4 312 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 C2orf50Q96LR7 162 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 FAM212BQ9NTI7 297 aaPredicted RBP7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 INSL5Q9Y5Q6 135 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 TMEM14AQ9Y6G1 99 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 NOTCH4Q99466 2003 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 ZNF724A8MTY0 619 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 SFT2D2O95562 160 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 IGFBP3P17936 291 aaPredicted RBP7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 FSTP19883 344 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms