RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 BCL7BQ9BQE9 202 aa17.61■□□□□ 0.41
PTPRU-203ENST00000415600 IFT27Q9BW83 186 aa17.61■□□□□ 0.41
PTPRU-203ENST00000415600 MRPL37Q9BZE1 423 aaKnown RBP17.61■□□□□ 0.41
PTPRU-203ENST00000415600 VGLL3A8MV65 326 aa17.6■□□□□ 0.41
PTPRU-203ENST00000415600 NDUFB2O95178 105 aa17.6■□□□□ 0.41
PTPRU-203ENST00000415600 RAB40BQ12829 278 aa17.6■□□□□ 0.41
PTPRU-203ENST00000415600 TBC1D28Q2M2D7 210 aa17.6■□□□□ 0.41
PTPRU-203ENST00000415600 UNQ6126/PRO20091Q6UXV3 157 aa17.6■□□□□ 0.41
PTPRU-203ENST00000415600 ZNF367Q7RTV3 350 aa17.6■□□□□ 0.41
PTPRU-203ENST00000415600 MCHR2Q969V1 340 aa17.6■□□□□ 0.41
PTPRU-203ENST00000415600 ZNF75AQ96N20 296 aa17.6■□□□□ 0.41
PTPRU-203ENST00000415600 CHODLQ9H9P2 273 aa17.6■□□□□ 0.41
PTPRU-203ENST00000415600 CMC2Q9NRP2 79 aa17.6■□□□□ 0.41
PTPRU-203ENST00000415600 ZNF224Q9NZL3 707 aa17.6■□□□□ 0.41
PTPRU-203ENST00000415600 DIMT1Q9UNQ2 313 aaKnown RBP17.6■□□□□ 0.41
PTPRU-203ENST00000415600 A0A1W2PPW3 197 aa17.59■□□□□ 0.41
PTPRU-203ENST00000415600 NPIPB13A6NJU9 1138 aa17.59■□□□□ 0.41
PTPRU-203ENST00000415600 NPIPB4C9JG80 1138 aa17.59■□□□□ 0.41
PTPRU-203ENST00000415600 SLC2A10O95528 541 aa17.59■□□□□ 0.41
PTPRU-203ENST00000415600 TGFAP01135 160 aa17.59■□□□□ 0.41
PTPRU-203ENST00000415600 F13BP05160 661 aa17.59■□□□□ 0.41
PTPRU-203ENST00000415600 SRD5A1P18405 259 aa17.59■□□□□ 0.41
PTPRU-203ENST00000415600 GUCA1AP43080 201 aaPredicted RBP17.59■□□□□ 0.41
PTPRU-203ENST00000415600 RAD52P43351 418 aa17.59■□□□□ 0.41
PTPRU-203ENST00000415600 MOGQ16653 247 aa17.59■□□□□ 0.41
PTPRU-203ENST00000415600 RGS7BPQ6MZT1 257 aaPredicted RBP17.59■□□□□ 0.41
PTPRU-203ENST00000415600 SLC16A12Q6ZSM3 486 aa17.59■□□□□ 0.41
PTPRU-203ENST00000415600 OR52I1Q8NGK6 324 aa17.59■□□□□ 0.41
PTPRU-203ENST00000415600 FNDC8Q8TC99 324 aa17.59■□□□□ 0.41
PTPRU-203ENST00000415600 ASB10Q8WXI3 467 aa17.59■□□□□ 0.41
PTPRU-203ENST00000415600 MSI2Q96DH6 328 aaKnown RBP17.59■□□□□ 0.41
PTPRU-203ENST00000415600 SH3GL3Q99963 347 aa17.59■□□□□ 0.41
PTPRU-203ENST00000415600 SYT3Q9BQG1 590 aa17.59■□□□□ 0.41
PTPRU-203ENST00000415600 FGF20Q9NP95 211 aaPredicted RBP17.59■□□□□ 0.41
PTPRU-203ENST00000415600 HINT3Q9NQE9 182 aaKnown RBP17.59■□□□□ 0.41
PTPRU-203ENST00000415600 DUSP13Q9UII6 198 aa17.59■□□□□ 0.41
PTPRU-203ENST00000415600 GABARAPO95166 117 aa17.58■□□□□ 0.41
PTPRU-203ENST00000415600 TACSTD2P09758 323 aa17.58■□□□□ 0.41
PTPRU-203ENST00000415600 THBS2P35442 1172 aa17.58■□□□□ 0.41
PTPRU-203ENST00000415600 TGFBR2P37173 567 aa17.58■□□□□ 0.41
PTPRU-203ENST00000415600 AQP2P41181 271 aa17.58■□□□□ 0.41
PTPRU-203ENST00000415600 MTNR1AP48039 350 aa17.58■□□□□ 0.41
PTPRU-203ENST00000415600 HSF2Q03933 536 aa17.58■□□□□ 0.41
PTPRU-203ENST00000415600 LSAMPQ13449 338 aa17.58■□□□□ 0.41
PTPRU-203ENST00000415600 HIST3H3Q16695 136 aa17.58■□□□□ 0.41
PTPRU-203ENST00000415600 TIGD6Q17RP2 521 aa17.58■□□□□ 0.41
PTPRU-203ENST00000415600 GID4Q8IVV7 300 aa17.58■□□□□ 0.41
PTPRU-203ENST00000415600 WDFY1Q8IWB7 410 aa17.58■□□□□ 0.41
PTPRU-203ENST00000415600 ZCCHC24Q8N2G6 241 aaKnown RBP17.58■□□□□ 0.41
PTPRU-203ENST00000415600 SYT14Q8NB59 555 aa17.58■□□□□ 0.41
PTPRU-203ENST00000415600 SNX33Q8WV41 574 aa17.58■□□□□ 0.41
PTPRU-203ENST00000415600 LGALS12Q96DT0 336 aa17.58■□□□□ 0.41
PTPRU-203ENST00000415600 RNFT2Q96EX2 444 aa17.58■□□□□ 0.41
PTPRU-203ENST00000415600 MRPL13Q9BYD1 178 aaKnown RBP17.58■□□□□ 0.41
PTPRU-203ENST00000415600 BCL2L14Q9BZR8 327 aa17.58■□□□□ 0.41
PTPRU-203ENST00000415600 TPK1Q9H3S4 243 aa17.58■□□□□ 0.41
PTPRU-203ENST00000415600 MXRA5Q9NR99 2828 aa17.58■□□□□ 0.4
PTPRU-203ENST00000415600 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.58■□□□□ 0.42e-6■■■■□ 22.4
PTPRU-203ENST00000415600 YLPM1P49750 1951 aaKnown RBP17.58■□□□□ 0.4
PTPRU-203ENST00000415600 PPP1R3DO95685 299 aa17.57■□□□□ 0.4
PTPRU-203ENST00000415600 MT-ND5P03915 603 aa17.57■□□□□ 0.4
PTPRU-203ENST00000415600 HTR1FP30939 366 aa17.57■□□□□ 0.4
PTPRU-203ENST00000415600 APLNRP35414 380 aa17.57■□□□□ 0.4
PTPRU-203ENST00000415600 NKPD1Q17RQ9 610 aa17.57■□□□□ 0.4
PTPRU-203ENST00000415600 ANKDD1AQ495B1 522 aa17.57■□□□□ 0.4
PTPRU-203ENST00000415600 FAM205BPQ63HN1 556 aa17.57■□□□□ 0.4
PTPRU-203ENST00000415600 C11orf40Q8WZ69 217 aa17.57■□□□□ 0.4
PTPRU-203ENST00000415600 NDEL1Q9GZM8 345 aa17.57■□□□□ 0.4
PTPRU-203ENST00000415600 SIAEQ9HAT2 523 aa17.57■□□□□ 0.4
PTPRU-203ENST00000415600 SLCO1C1Q9NYB5 712 aa17.57■□□□□ 0.4
PTPRU-203ENST00000415600 H2AFY2Q9P0M6 372 aaPredicted RBP17.57■□□□□ 0.4
PTPRU-203ENST00000415600 PATE4P0C8F1 98 aa17.57■□□□□ 0.4
PTPRU-203ENST00000415600 APEX1P27695 318 aaKnown RBP17.57■□□□□ 0.4
PTPRU-203ENST00000415600 CTF1Q16619 201 aa17.57■□□□□ 0.4
PTPRU-203ENST00000415600 ALG10Q5BKT4 473 aa17.57■□□□□ 0.4
PTPRU-203ENST00000415600 C10orf128Q5T292 105 aa17.57■□□□□ 0.4
PTPRU-203ENST00000415600 CPOQ8IVL8 374 aa17.57■□□□□ 0.4
PTPRU-203ENST00000415600 RDH5Q92781 318 aa17.57■□□□□ 0.4
PTPRU-203ENST00000415600 RBP7Q96R05 134 aa17.57■□□□□ 0.4
PTPRU-203ENST00000415600 GPX7Q96SL4 187 aaPredicted RBP17.57■□□□□ 0.4
PTPRU-203ENST00000415600 RACGAP1Q9H0H5 632 aa17.57■□□□□ 0.4
PTPRU-203ENST00000415600 TXNIPQ9H3M7 391 aa17.57■□□□□ 0.4
PTPRU-203ENST00000415600 ERGIC3Q9Y282 383 aa17.57■□□□□ 0.4
PTPRU-203ENST00000415600 STAB1Q9NY15 2570 aa17.56■□□□□ 0.4
PTPRU-203ENST00000415600 RIIAD1A6NNX1 92 aa17.56■□□□□ 0.4
PTPRU-203ENST00000415600 KLF3P57682 345 aaPredicted RBP17.56■□□□□ 0.4
PTPRU-203ENST00000415600 MRPS11P82912 194 aaKnown RBP17.56■□□□□ 0.4
PTPRU-203ENST00000415600 MRPS34P82930 218 aaKnown RBP17.56■□□□□ 0.4
PTPRU-203ENST00000415600 FAM120AOSQ5T036 256 aa17.56■□□□□ 0.4
PTPRU-203ENST00000415600 ZNF362Q5T0B9 420 aaPredicted RBP17.56■□□□□ 0.4
PTPRU-203ENST00000415600 SLC35F1Q5T1Q4 408 aa17.56■□□□□ 0.4
PTPRU-203ENST00000415600 DPY19L2P2Q6ZN68 376 aa17.56■□□□□ 0.4
PTPRU-203ENST00000415600 ZNF584Q8IVC4 421 aa17.56■□□□□ 0.4
PTPRU-203ENST00000415600 NANOGP1Q8N7R0 232 aa17.56■□□□□ 0.4
PTPRU-203ENST00000415600 LINC01356Q8N9X3 169 aa17.56■□□□□ 0.4
PTPRU-203ENST00000415600 PROKR2Q8NFJ6 384 aa17.56■□□□□ 0.4
PTPRU-203ENST00000415600 ALG12Q9BV10 488 aa17.56■□□□□ 0.4
PTPRU-203ENST00000415600 MND1Q9BWT6 205 aa17.56■□□□□ 0.4
PTPRU-203ENST00000415600 EXOGQ9Y2C4 368 aaKnown RBP17.56■□□□□ 0.4
PTPRU-203ENST00000415600 HIF3AQ9Y2N7 669 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms