RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 GAL3ST4Q96RP7 486 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 ZNF768Q9H5H4 540 aaKnown RBP8.76□□□□□ -1.01
CD44-206ENST00000415148 CLEC1BQ9P126 229 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 KLK13Q9UKR3 277 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 VSIG4Q9Y279 399 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 PRELID3BQ9Y3B1 194 aa8.76□□□□□ -1.01
CD44-206ENST00000415148 CFAP54Q96N23 3096 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 LOC101059948A0A1B0GTJ6 334 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 H3BMH7 237 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 SOX1O00570 391 aaPredicted RBP8.75□□□□□ -1.01
CD44-206ENST00000415148 HLA-AP01891 365 aaKnown RBP8.75□□□□□ -1.01
CD44-206ENST00000415148 CNR1P21554 472 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 BDKRB2P30411 391 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 MMP16P51512 607 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 CXADRP78310 365 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 OR7A5Q15622 319 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 TMPPEQ6ZT21 453 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 RHOUQ7L0Q8 258 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 SLC29A4Q7RTT9 530 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 CD163Q86VB7 1156 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 C17orf82Q86X59 251 aaPredicted RBP8.75□□□□□ -1.01
CD44-206ENST00000415148 MISPQ8IVT2 679 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 C9orf40Q8IXQ3 194 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 JAGN1Q8N5M9 183 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 OR1N1Q8NGS0 311 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 TMEM234Q8WY98 164 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 FAM46BQ96A09 425 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 CMBLQ96DG6 245 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 ZDHHC12Q96GR4 267 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 PHB2Q99623 299 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 UQCC2Q9BRT2 126 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 PDCD10Q9BUL8 212 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 ZNF471Q9BX82 626 aaPredicted RBP8.75□□□□□ -1.01
CD44-206ENST00000415148 WWTR1Q9GZV5 400 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 SLC6A15Q9H2J7 730 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 PIGMQ9H3S5 423 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 COPS7AQ9UBW8 275 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 FBLN5Q9UBX5 448 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 PURGQ9UJV8 347 aaKnown RBP8.75□□□□□ -1.01
CD44-206ENST00000415148 PCDHB10Q9UN67 800 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 EMC9Q9Y3B6 208 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 NOP16Q9Y3C1 178 aaKnown RBP8.75□□□□□ -1.01
CD44-206ENST00000415148 TMEM269A0A1B0GVZ9 245 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 LOC107986453A0A1B0GWG9 222 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 EPOPA6NHQ4 379 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 FTCDNL1E5RQL4 147 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 RAB27BO00194 218 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 ABCD4O14678 606 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 BPNT1O95861 308 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 AVPR2P30518 371 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 DAP3P51398 398 aaKnown RBP8.75□□□□□ -1.01
CD44-206ENST00000415148 SPOCK1Q08629 439 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 HFEQ30201 348 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 PAN3Q58A45 887 aaKnown RBP8.75□□□□□ -1.01
CD44-206ENST00000415148 C9orf50Q5SZB4 431 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 ZNF813Q6ZN06 617 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 CARFQ8N187 725 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 ST7LQ8TDW4 575 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 PPP1R1CQ8WVI7 109 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 ASB10Q8WXI3 467 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 TSLPQ969D9 159 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 TGM7Q96PF1 710 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 TMEM231Q9H6L2 316 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 ASF1BQ9NVP2 202 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 CD207Q9UJ71 328 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 ZNF175Q9Y473 711 aa8.75□□□□□ -1.01
CD44-206ENST00000415148 KLF2Q9Y5W3 355 aaPredicted RBP8.75□□□□□ -1.01
CD44-206ENST00000415148 C9orf170A2RU37 121 aa8.74□□□□□ -1.01
CD44-206ENST00000415148 RAB19A4D1S5 217 aa8.74□□□□□ -1.01
CD44-206ENST00000415148 TMEM235A6NFC5 223 aa8.74□□□□□ -1.01
CD44-206ENST00000415148 ZNF98A6NK75 572 aa8.74□□□□□ -1.01
CD44-206ENST00000415148 MS4A18H0YCH9 400 aa8.74□□□□□ -1.01
CD44-206ENST00000415148 SULT2B1O00204 365 aa8.74□□□□□ -1.01
CD44-206ENST00000415148 SIGLEC6O43699 453 aa8.74□□□□□ -1.01
CD44-206ENST00000415148 ACTL6AO96019 429 aa8.74□□□□□ -1.01
CD44-206ENST00000415148 ABCD3P28288 659 aa8.74□□□□□ -1.01
CD44-206ENST00000415148 AKR1D1P51857 326 aa8.74□□□□□ -1.01
CD44-206ENST00000415148 ZP2Q05996 745 aa8.74□□□□□ -1.01
CD44-206ENST00000415148 MS4A18Q3C1V0 323 aa8.74□□□□□ -1.01
CD44-206ENST00000415148 CDNFQ49AH0 187 aa8.74□□□□□ -1.01
CD44-206ENST00000415148 OR52W1Q6IF63 320 aa8.74□□□□□ -1.01
CD44-206ENST00000415148 C3orf33Q6P1S2 294 aa8.74□□□□□ -1.01
CD44-206ENST00000415148 TTLL10Q6ZVT0 673 aa8.74□□□□□ -1.01
CD44-206ENST00000415148 DCXRQ7Z4W1 244 aa8.74□□□□□ -1.01
CD44-206ENST00000415148 FJX1Q86VR8 437 aa8.74□□□□□ -1.01
CD44-206ENST00000415148 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.74□□□□□ -1.01
CD44-206ENST00000415148 GVQW1Q8N7I0 195 aa8.74□□□□□ -1.01
CD44-206ENST00000415148 ZNF441Q8N8Z8 693 aa8.74□□□□□ -1.01
CD44-206ENST00000415148 BHLHE23Q8NDY6 225 aa8.74□□□□□ -1.01
CD44-206ENST00000415148 OR4D6Q8NGJ1 314 aa8.74□□□□□ -1.01
CD44-206ENST00000415148 MFSD8Q8NHS3 518 aa8.74□□□□□ -1.01
CD44-206ENST00000415148 THAP6Q8TBB0 222 aa8.74□□□□□ -1.01
CD44-206ENST00000415148 GAREM1Q9H706 876 aa8.74□□□□□ -1.01
CD44-206ENST00000415148 SLC2A4RGQ9NR83 387 aa8.74□□□□□ -1.01
CD44-206ENST00000415148 CYP8B1Q9UNU6 501 aa8.74□□□□□ -1.01
CD44-206ENST00000415148 ARID1AO14497 2285 aa8.74□□□□□ -1.01
CD44-206ENST00000415148 FAM25EA8MYX2 175 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 ATG12O94817 140 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 MPZL1O95297 269 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 H2BFMP0C1H6 154 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms