RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 CTSEP14091 401 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 CPN1P15169 458 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 S100A11P31949 105 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 MAS1LP35410 378 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 CEACAM3P40198 252 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 PI4KAP42356 2102 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 RPL35P42766 123 aaKnown RBP8.41□□□□□ -1.06
SNHG3-201ENST00000413987 PTGFRP43088 359 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 SRP9P49458 86 aaKnown RBP8.41□□□□□ -1.06
SNHG3-201ENST00000413987 ARL4DP49703 201 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 SELENOPP49908 381 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 MAZP56270 477 aaKnown RBP8.41□□□□□ -1.06
SNHG3-201ENST00000413987 ILF3Q12906 894 aaKnown RBP eCLIP8.41□□□□□ -1.066e-6■□□□□ 8.6
SNHG3-201ENST00000413987 TRAM1Q15629 374 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 ZSWIM7Q19AV6 140 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 DEFB133Q30KQ1 61 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 DEF8Q6ZN54 512 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 C17orf107Q6ZR85 190 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 SHFQ7M4L6 423 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 IQCF1Q8N6M8 205 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 ZFP41Q8N8Y5 198 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 NUP43Q8NFH3 380 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 OR4E2Q8NGC2 313 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 ST8SIA1Q92185 356 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 SLC38A3Q99624 504 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 C20orf24Q9BUV8 137 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 FAIM2Q9BWQ8 316 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 RAB18Q9NP72 206 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 BIN3Q9NQY0 253 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 POT1Q9NUX5 634 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 DNAJB12Q9NXW2 375 aaKnown RBP8.41□□□□□ -1.06
SNHG3-201ENST00000413987 FOXJ3Q9UPW0 622 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 ICKQ9UPZ9 632 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 X6R8D5 127 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 TMEM131Q92545 1883 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 CACNA1HO95180 2353 aa8.4□□□□□ -1.06
SNHG3-201ENST00000413987 CACNA1EQ15878 2313 aa8.4□□□□□ -1.06
SNHG3-201ENST00000413987 TP53BP1Q12888 1972 aaPredicted RBP8.4□□□□□ -1.06
SNHG3-201ENST00000413987 TMEM89A2RUT3 159 aa8.4□□□□□ -1.06
SNHG3-201ENST00000413987 HMSDA8MTL9 139 aa8.4□□□□□ -1.06
SNHG3-201ENST00000413987 MCIDASD6RGH6 385 aa8.4□□□□□ -1.06
SNHG3-201ENST00000413987 P2RY10O00398 339 aa8.4□□□□□ -1.06
SNHG3-201ENST00000413987 GSTZ1O43708 216 aaPredicted RBP8.4□□□□□ -1.06
SNHG3-201ENST00000413987 TSPAN2O60636 221 aa8.4□□□□□ -1.06
SNHG3-201ENST00000413987 CXCL2P19875 107 aa8.4□□□□□ -1.06
SNHG3-201ENST00000413987 PPP1CAP62136 330 aa8.4□□□□□ -1.06
SNHG3-201ENST00000413987 RAE1P78406 368 aaKnown RBP8.4□□□□□ -1.06
SNHG3-201ENST00000413987 GK2Q14410 553 aaPredicted RBP8.4□□□□□ -1.06
SNHG3-201ENST00000413987 PON3Q15166 354 aa8.4□□□□□ -1.06
SNHG3-201ENST00000413987 TMEM35AQ53FP2 167 aa8.4□□□□□ -1.06
SNHG3-201ENST00000413987 ENTPD8Q5MY95 495 aa8.4□□□□□ -1.06
SNHG3-201ENST00000413987 GRHL2Q6ISB3 625 aa8.4□□□□□ -1.06
SNHG3-201ENST00000413987 RHBDD2Q6NTF9 364 aa8.4□□□□□ -1.06
SNHG3-201ENST00000413987 ACSM5Q6NUN0 579 aa8.4□□□□□ -1.06
SNHG3-201ENST00000413987 TCTN3Q6NUS6 607 aa8.4□□□□□ -1.06
SNHG3-201ENST00000413987 ASCL4Q6XD76 172 aa8.4□□□□□ -1.06
SNHG3-201ENST00000413987 SSX9Q7RTT3 188 aa8.4□□□□□ -1.06
SNHG3-201ENST00000413987 MRGPREQ86SM8 312 aa8.4□□□□□ -1.06
SNHG3-201ENST00000413987 OR6V1Q8N148 313 aa8.4□□□□□ -1.06
SNHG3-201ENST00000413987 LMX1AQ8TE12 382 aa8.4□□□□□ -1.06
SNHG3-201ENST00000413987 SLC37A2Q8TED4 501 aa8.4□□□□□ -1.06
SNHG3-201ENST00000413987 SOX7Q9BT81 388 aa8.4□□□□□ -1.06
SNHG3-201ENST00000413987 C20orf85Q9H1P6 137 aa8.4□□□□□ -1.06
SNHG3-201ENST00000413987 DUSP15Q9H1R2 295 aaPredicted RBP8.4□□□□□ -1.06
SNHG3-201ENST00000413987 GAREM1Q9H706 876 aa8.4□□□□□ -1.06
SNHG3-201ENST00000413987 OR2S2Q9NQN1 319 aa8.4□□□□□ -1.06
SNHG3-201ENST00000413987 UFSP2Q9NUQ7 469 aa8.4□□□□□ -1.06
SNHG3-201ENST00000413987 COA4Q9NYJ1 87 aa8.4□□□□□ -1.06
SNHG3-201ENST00000413987 A0A1W2PPV9 198 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 AQP8O94778 261 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 FBLP22087 321 aaKnown RBP8.39□□□□□ -1.07
SNHG3-201ENST00000413987 PEBP1P30086 187 aaKnown RBP8.39□□□□□ -1.07
SNHG3-201ENST00000413987 ID1P41134 155 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 GPR12P47775 334 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 MEOX2P50222 304 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 SLC37A1P57057 533 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 NXPH1P58417 271 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 GPR18Q14330 331 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 LTB4RQ15722 352 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 VAMP3Q15836 100 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 SLC27A4Q6P1M0 643 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 TMEM17Q86X19 198 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 BEST4Q8NFU0 473 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 OR4D10Q8NGI6 311 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 OR10G6Q8NH81 332 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 SETD7Q8WTS6 366 aaKnown RBP8.39□□□□□ -1.07
SNHG3-201ENST00000413987 MCHR2Q969V1 340 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 PPCDCQ96CD2 204 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 ORAI1Q96D31 301 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 MRPS24Q96EL2 167 aaKnown RBP8.39□□□□□ -1.07
SNHG3-201ENST00000413987 ZNF354BQ96LW1 612 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 C10orf90Q96M02 699 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 CDCP1Q9H5V8 836 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 A4GALTQ9NPC4 353 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 KIAA1456Q9P272 454 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 FBXL2Q9UKC9 423 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 PITPNC1Q9UKF7 332 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 SLC6A5Q9Y345 797 aa8.39□□□□□ -1.07
SNHG3-201ENST00000413987 TBL2Q9Y4P3 447 aaKnown RBP8.39□□□□□ -1.07
SNHG3-201ENST00000413987 WIF1Q9Y5W5 379 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms