RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 GBA3Q9H227 469 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 GORASP2Q9H8Y8 452 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 PARVAQ9NVD7 372 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 ETNK2Q9NVF9 386 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 ZNF226Q9NYT6 803 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 CALYQ9NYX4 217 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 BFARQ9NZS9 450 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 GNPTGQ9UJJ9 305 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 ZNF223Q9UK11 482 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 TBX21Q9UL17 535 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 CDH9Q9ULB4 789 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 PSG11Q9UQ72 335 aa2.29□□□□□ -2.04
HMGB1P11-201ENST00000413899 IGKV2D-24A0A075B6R9 120 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 MYBPHLA2RUH7 354 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 ERICH4A6NGS2 130 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 APOC4-APOC2K7ER74 178 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 TRAPPC3O43617 180 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 CST8O60676 142 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 TTC4O95801 387 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 APOC2P02655 101 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 FGF1P05230 155 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 ASGR1P07306 291 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 MAGP20916 626 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 CD52P31358 61 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 GSSP48637 474 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 PLTPP55058 493 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 DAOAP59103 153 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 GNGT1P63211 74 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 GBE1Q04446 702 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 ACVR1Q04771 509 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 ADIGQ0VDE8 80 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 BST2Q10589 180 aaKnown RBP2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 PLD1Q13393 1074 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 MADCAM1Q13477 382 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 GGTLC2Q14390 218 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 IHHQ14623 411 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 SGCAQ16586 387 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 LIN9Q5TKA1 542 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 SYPL2Q5VXT5 272 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 TTC19Q6DKK2 380 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 PPP1R2P3Q6NXS1 205 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 STRADAQ7RTN6 431 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 SCD5Q86SK9 330 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 DHDDSQ86SQ9 333 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 TAC4Q86UU9 113 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 ECHDC2Q86YB7 292 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 H1FOOQ8IZA3 346 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 DEFB106AQ8N104 65 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 ZNF596Q8TC21 504 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 SLC2A14Q8TDB8 520 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 PYROXD1Q8WU10 500 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 FAM172AQ8WUF8 416 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 IFT81Q8WYA0 676 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 LRRC45Q96CN5 670 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 C10orf35Q96D05 121 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 ASB9Q96DX5 294 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 C9orf72Q96LT7 481 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 CSPG4P5Q96PW8 444 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 RNF157Q96PX1 679 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 COPS8Q99627 209 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 NPAS2Q99743 824 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 HDHD3Q9BSH5 251 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 VCXQ9H320 206 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 PATZ1Q9HBE1 687 aaKnown RBP2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 MCCC2Q9HCC0 563 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 CSNK1G1Q9HCP0 422 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 MRPL47Q9HD33 250 aaKnown RBP2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 LHX9Q9NQ69 397 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 EXD2Q9NVH0 621 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 GINS2Q9Y248 185 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 KCNIP3Q9Y2W7 256 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 UTP11Q9Y3A2 253 aaKnown RBP2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 N6AMT1Q9Y5N5 214 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 LRP4O75096 1905 aa2.28□□□□□ -2.04
HMGB1P11-201ENST00000413899 MYOFQ9NZM1 2061 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 PPIAL4EA0A075B759 164 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 KIR2DL5BA0A0G2JN68 375 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 KIR2DL5BA0A0G2JPC4 375 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 FAM92AA1XBS5 289 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 ARL5CA6NH57 179 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 CACNG3O60359 315 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 B4GALT2O60909 372 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 ZNF324O75467 553 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 UPK3AO75631 287 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 PIAS1O75925 651 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 AGTP01019 485 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 KRT7P08729 469 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 OR4Q2P0C623 313 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 PPIAL4FP0DN26 164 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 IGHV3-43DP0DP04 118 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 FOXN2P32314 431 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 FDFT1P37268 417 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 MAGEA8P43361 318 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 MAGEA12P43365 314 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 SLCO1A2P46721 670 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 SULT1E1P49888 294 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 MNAT1P51948 309 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 ACLYP53396 1101 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 ATP1B3P54709 279 aa2.27□□□□□ -2.05
HMGB1P11-201ENST00000413899 CDH6P55285 790 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms