RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 A0A0B4J2A0 478 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 OR6C76A6NM76 312 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 A8MVM7 634 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 H0YIG0 161 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 CELA2BP08218 269 aaPredicted RBP15.75■□□□□ 0.11
SDCBP-202ENST00000413219 ZNF823P16415 610 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 AKR1C4P17516 323 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 DCAF7P61962 342 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 PJVKQ0ZLH3 352 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 UNC119Q13432 240 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 PLEKHN1Q494U1 663 aaPredicted RBP15.75■□□□□ 0.11
SDCBP-202ENST00000413219 PARM1Q6UWI2 310 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 SLC22A24Q8N4F4 322 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 DMBX1Q8NFW5 382 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 SLC26A10Q8NG04 563 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 OR4A4PQ8NGN8 299 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 ELP5Q8TE02 316 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 NUDCD2Q8WVJ2 157 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 FGF14Q92915 247 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 SHPKQ9UHJ6 478 aa15.75■□□□□ 0.11
SDCBP-202ENST00000413219 TMED7-TICAM2A0A0A6YYA0 188 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 TMEM269A0A1B0GVZ9 245 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 ALG1L2C9J202 215 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 FAM157CP0CG43 387 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 NR0B1P51843 470 aaKnown RBP15.74■□□□□ 0.11
SDCBP-202ENST00000413219 SLC26A5P58743 744 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 C1orf140Q5VVS0 124 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 DNM1P34Q6PK57 102 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 MARCH3Q86UD3 253 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 SKA3Q8IX90 412 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 SLC22A18ASQ8N1D0 253 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 ST7LQ8TDW4 575 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 CMBLQ96DG6 245 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 SAT2Q96F10 170 aaPredicted RBP15.74■□□□□ 0.11
SDCBP-202ENST00000413219 SELENOIQ9C0D9 397 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 ESRP2Q9H6T0 727 aaKnown RBP15.74■□□□□ 0.11
SDCBP-202ENST00000413219 FN3KRPQ9HA64 309 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 UQCC1Q9NVA1 299 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 MMACHCQ9Y4U1 282 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 C13orf42A0A1B0GVH6 325 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 A6NIZ1 184 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 CEACAM18A8MTB9 384 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 IGKV3-11P04433 115 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 IFNA4P05014 189 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 MYOGP15173 224 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 ABOP16442 354 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 IL12BP29460 328 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 RAP1BP61224 184 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 RAP1AP62834 184 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 OR7A5Q15622 319 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 TMEM128Q5BJH2 165 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 C5orf46Q6UWT4 87 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 TMEM151BQ8IW70 566 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 GLYATL2Q8WU03 294 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 RAB18Q9NP72 206 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 TREM1Q9NP99 234 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 PNO1Q9NRX1 252 aaKnown RBP15.74■□□□□ 0.11
SDCBP-202ENST00000413219 CTSFQ9UBX1 484 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 ANAPC10Q9UM13 185 aa15.74■□□□□ 0.11
SDCBP-202ENST00000413219 TMEM184BQ9Y519 407 aaPredicted RBP15.74■□□□□ 0.11
SDCBP-202ENST00000413219 ATG2BQ96BY7 2078 aa15.73■□□□□ 0.11
SDCBP-202ENST00000413219 LMX1BO60663 402 aa15.73■□□□□ 0.11
SDCBP-202ENST00000413219 NUDT14O95848 222 aa15.73■□□□□ 0.11
SDCBP-202ENST00000413219 GABRA4P48169 554 aa15.73■□□□□ 0.11
SDCBP-202ENST00000413219 MMP16P51512 607 aa15.73■□□□□ 0.11
SDCBP-202ENST00000413219 MST1LQ2TV78 715 aa15.73■□□□□ 0.11
SDCBP-202ENST00000413219 ACTBL2Q562R1 376 aa15.73■□□□□ 0.11
SDCBP-202ENST00000413219 AVPI1Q5T686 147 aa15.73■□□□□ 0.11
SDCBP-202ENST00000413219 DCXRQ7Z4W1 244 aa15.73■□□□□ 0.11
SDCBP-202ENST00000413219 ZSCAN4Q8NAM6 433 aaPredicted RBP15.73■□□□□ 0.11
SDCBP-202ENST00000413219 OR10R2Q8NGX6 335 aa15.73■□□□□ 0.11
SDCBP-202ENST00000413219 LILRB1Q8NHL6 650 aaPredicted RBP15.73■□□□□ 0.11
SDCBP-202ENST00000413219 TMED6Q8WW62 240 aa15.73■□□□□ 0.11
SDCBP-202ENST00000413219 USB1Q9BQ65 265 aaKnown RBP15.73■□□□□ 0.11
SDCBP-202ENST00000413219 ADAT1Q9BUB4 502 aaKnown RBP15.73■□□□□ 0.11
SDCBP-202ENST00000413219 RPP25Q9BUL9 199 aaKnown RBP15.73■□□□□ 0.11
SDCBP-202ENST00000413219 LANCL2Q9NS86 450 aa15.73■□□□□ 0.11
SDCBP-202ENST00000413219 LPAR3Q9UBY5 353 aa15.73■□□□□ 0.11
SDCBP-202ENST00000413219 CPAMD8Q8IZJ3 1885 aa15.73■□□□□ 0.11
SDCBP-202ENST00000413219 P2RY10O00398 339 aa15.72■□□□□ 0.11
SDCBP-202ENST00000413219 SSX5O60225 188 aa15.72■□□□□ 0.11
SDCBP-202ENST00000413219 MPZL1O95297 269 aa15.72■□□□□ 0.11
SDCBP-202ENST00000413219 AHSA1O95433 338 aa15.72■□□□□ 0.11
SDCBP-202ENST00000413219 APOC1P02654 83 aa15.72■□□□□ 0.11
SDCBP-202ENST00000413219 VSIG8P0DPA2 414 aa15.72■□□□□ 0.11
SDCBP-202ENST00000413219 CD1CP29017 333 aa15.72■□□□□ 0.11
SDCBP-202ENST00000413219 VEGFBP49765 207 aa15.72■□□□□ 0.11
SDCBP-202ENST00000413219 SRSF3P84103 164 aaKnown RBP15.72■□□□□ 0.11
SDCBP-202ENST00000413219 ZP2Q05996 745 aa15.72■□□□□ 0.11
SDCBP-202ENST00000413219 SLC22A6Q4U2R8 563 aa15.72■□□□□ 0.11
SDCBP-202ENST00000413219 PRSS54Q6PEW0 395 aa15.72■□□□□ 0.11
SDCBP-202ENST00000413219 PRR22Q8IZ63 422 aa15.72■□□□□ 0.11
SDCBP-202ENST00000413219 TERB2Q8NHR7 220 aa15.72■□□□□ 0.11
SDCBP-202ENST00000413219 MARCH1Q8TCQ1 289 aa15.72■□□□□ 0.11
SDCBP-202ENST00000413219 FGGYQ96C11 551 aa15.72■□□□□ 0.11
SDCBP-202ENST00000413219 DNAJA3Q96EY1 480 aa15.72■□□□□ 0.11
SDCBP-202ENST00000413219 RRNAD1Q96FB5 475 aaKnown RBP15.72■□□□□ 0.11
SDCBP-202ENST00000413219 OR8D2Q9GZM6 311 aa15.72■□□□□ 0.11
SDCBP-202ENST00000413219 ZNF768Q9H5H4 540 aaKnown RBP15.72■□□□□ 0.11
SDCBP-202ENST00000413219 SLC5A6Q9Y289 635 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms