RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 CRLF1O75462 422 aa16.02■□□□□ 0.16
TRIM56-202ENST00000412507 OSMP13725 252 aa16.02■□□□□ 0.16
TRIM56-202ENST00000412507 KITLGP21583 273 aa16.02■□□□□ 0.16
TRIM56-202ENST00000412507 TMEM33P57088 247 aa16.02■□□□□ 0.16
TRIM56-202ENST00000412507 ECH1Q13011 328 aa16.02■□□□□ 0.16
TRIM56-202ENST00000412507 HLXQ14774 488 aaPredicted RBP16.02■□□□□ 0.16
TRIM56-202ENST00000412507 KRTAP27-1Q3LI81 207 aa16.02■□□□□ 0.16
TRIM56-202ENST00000412507 FAM209AQ5JX71 171 aa16.02■□□□□ 0.16
TRIM56-202ENST00000412507 C1orf146Q5VVC0 180 aa16.02■□□□□ 0.16
TRIM56-202ENST00000412507 NAA40Q86UY6 237 aa16.02■□□□□ 0.16
TRIM56-202ENST00000412507 OR5L1Q8NGL2 311 aa16.02■□□□□ 0.16
TRIM56-202ENST00000412507 OR10S1Q8NGN2 331 aa16.02■□□□□ 0.16
TRIM56-202ENST00000412507 OR6K6Q8NGW6 343 aa16.02■□□□□ 0.16
TRIM56-202ENST00000412507 OTULINQ96BN8 352 aa16.02■□□□□ 0.16
TRIM56-202ENST00000412507 HAVCR1Q96D42 359 aa16.02■□□□□ 0.16
TRIM56-202ENST00000412507 MSI2Q96DH6 328 aaKnown RBP16.02■□□□□ 0.16
TRIM56-202ENST00000412507 NARFLQ9H6Q4 476 aa16.02■□□□□ 0.16
TRIM56-202ENST00000412507 CGGBP1Q9UFW8 167 aaPredicted RBP16.02■□□□□ 0.16
TRIM56-202ENST00000412507 ADH4P08319 380 aa16.01■□□□□ 0.15
TRIM56-202ENST00000412507 SPARCP09486 303 aa16.01■□□□□ 0.15
TRIM56-202ENST00000412507 ACSM4P0C7M7 580 aa16.01■□□□□ 0.15
TRIM56-202ENST00000412507 ENTPD1P49961 510 aa16.01■□□□□ 0.15
TRIM56-202ENST00000412507 CCNIQ14094 377 aa16.01■□□□□ 0.15
TRIM56-202ENST00000412507 SPRNQ5BIV9 151 aa16.01■□□□□ 0.15
TRIM56-202ENST00000412507 Q6ZR03 302 aa16.01■□□□□ 0.15
TRIM56-202ENST00000412507 DCXRQ7Z4W1 244 aa16.01■□□□□ 0.15
TRIM56-202ENST00000412507 NRBF2Q96F24 287 aa16.01■□□□□ 0.15
TRIM56-202ENST00000412507 C1QTNF5Q9BXJ0 243 aa16.01■□□□□ 0.15
TRIM56-202ENST00000412507 ZDHHC8Q9ULC8 765 aa16.01■□□□□ 0.15
TRIM56-202ENST00000412507 CACNG2Q9Y698 323 aa16.01■□□□□ 0.15
TRIM56-202ENST00000412507 ARHGAP32A7KAX9 2087 aa16.01■□□□□ 0.15
TRIM56-202ENST00000412507 WNK2Q9Y3S1 2297 aa16.01■□□□□ 0.15
TRIM56-202ENST00000412507 DOCK11Q5JSL3 2073 aa16■□□□□ 0.15
TRIM56-202ENST00000412507 LOC100289279A0A1B0GTE1 492 aa16■□□□□ 0.15
TRIM56-202ENST00000412507 ZNF593O00488 134 aaPredicted RBP16■□□□□ 0.15
TRIM56-202ENST00000412507 WNT9BO14905 357 aa16■□□□□ 0.15
TRIM56-202ENST00000412507 RAC2P15153 192 aa16■□□□□ 0.15
TRIM56-202ENST00000412507 CDK5Q00535 292 aa16■□□□□ 0.15
TRIM56-202ENST00000412507 CDK5R2Q13319 367 aa16■□□□□ 0.15
TRIM56-202ENST00000412507 ZMAT1Q5H9K5 638 aa16■□□□□ 0.15
TRIM56-202ENST00000412507 LINC01590Q5TEZ4 76 aa16■□□□□ 0.15
TRIM56-202ENST00000412507 OR2T2Q6IF00 324 aa16■□□□□ 0.15
TRIM56-202ENST00000412507 FBXW12Q6X9E4 464 aa16■□□□□ 0.15
TRIM56-202ENST00000412507 COLCA1Q6ZS62 124 aa16■□□□□ 0.15
TRIM56-202ENST00000412507 OR5AS1Q8N127 324 aa16■□□□□ 0.15
TRIM56-202ENST00000412507 OR5K1Q8NHB7 308 aa16■□□□□ 0.15
TRIM56-202ENST00000412507 ELMOD3Q96FG2 381 aa16■□□□□ 0.15
TRIM56-202ENST00000412507 DIRC2Q96SL1 478 aa16■□□□□ 0.15
TRIM56-202ENST00000412507 EGLN1Q9GZT9 426 aa16■□□□□ 0.15
TRIM56-202ENST00000412507 TREM2Q9NZC2 230 aa16■□□□□ 0.15
TRIM56-202ENST00000412507 KIF17Q9P2E2 1029 aa16■□□□□ 0.15
TRIM56-202ENST00000412507 SURF4O15260 269 aa15.99■□□□□ 0.15
TRIM56-202ENST00000412507 LMX1BO60663 402 aa15.99■□□□□ 0.15
TRIM56-202ENST00000412507 TGFAP01135 160 aa15.99■□□□□ 0.15
TRIM56-202ENST00000412507 LCATP04180 440 aa15.99■□□□□ 0.15
TRIM56-202ENST00000412507 DAPP51397 102 aa15.99■□□□□ 0.15
TRIM56-202ENST00000412507 BLVRAP53004 296 aa15.99■□□□□ 0.15
TRIM56-202ENST00000412507 TPTEP56180 551 aa15.99■□□□□ 0.15
TRIM56-202ENST00000412507 TNFAIP6P98066 277 aaPredicted RBP15.99■□□□□ 0.15
TRIM56-202ENST00000412507 ATP6AP1Q15904 470 aa15.99■□□□□ 0.15
TRIM56-202ENST00000412507 PCK2Q16822 640 aa15.99■□□□□ 0.15
TRIM56-202ENST00000412507 HFEQ30201 348 aa15.99■□□□□ 0.15
TRIM56-202ENST00000412507 KRTAP21-3Q3LHN1 58 aa15.99■□□□□ 0.15
TRIM56-202ENST00000412507 TMEM236Q5W0B7 351 aa15.99■□□□□ 0.15
TRIM56-202ENST00000412507 HIPK1Q86Z02 1210 aa15.99■□□□□ 0.15
TRIM56-202ENST00000412507 OR2Z1Q8NG97 314 aa15.99■□□□□ 0.15
TRIM56-202ENST00000412507 CLDND2Q8NHS1 167 aa15.99■□□□□ 0.15
TRIM56-202ENST00000412507 OR51V1Q9H2C8 321 aa15.99■□□□□ 0.15
TRIM56-202ENST00000412507 AP4S1Q9Y587 144 aa15.99■□□□□ 0.15
TRIM56-202ENST00000412507 PRR23D1E9PI22 279 aaPredicted RBP15.98■□□□□ 0.15
TRIM56-202ENST00000412507 M0R135 149 aa15.98■□□□□ 0.15
TRIM56-202ENST00000412507 CIB2O75838 187 aa15.98■□□□□ 0.15
TRIM56-202ENST00000412507 GLCEO94923 617 aa15.98■□□□□ 0.15
TRIM56-202ENST00000412507 HMGN1P05114 100 aa15.98■□□□□ 0.15
TRIM56-202ENST00000412507 CD55P08174 381 aa15.98■□□□□ 0.15
TRIM56-202ENST00000412507 PRR23D2P0DMB1 279 aaPredicted RBP15.98■□□□□ 0.15
TRIM56-202ENST00000412507 PAICSP22234 425 aaKnown RBP15.98■□□□□ 0.15
TRIM56-202ENST00000412507 FASP25445 335 aa15.98■□□□□ 0.15
TRIM56-202ENST00000412507 PRSS12P56730 875 aa15.98■□□□□ 0.15
TRIM56-202ENST00000412507 MVKQ03426 396 aa15.98■□□□□ 0.15
TRIM56-202ENST00000412507 TEX30Q5JUR7 227 aa15.98■□□□□ 0.15
TRIM56-202ENST00000412507 AVPI1Q5T686 147 aa15.98■□□□□ 0.15
TRIM56-202ENST00000412507 FAM166AQ6J272 317 aa15.98■□□□□ 0.15
TRIM56-202ENST00000412507 PLBD1Q6P4A8 553 aa15.98■□□□□ 0.15
TRIM56-202ENST00000412507 FAHD1Q6P587 224 aa15.98■□□□□ 0.15
TRIM56-202ENST00000412507 ASRGL1Q7L266 308 aa15.98■□□□□ 0.15
TRIM56-202ENST00000412507 AMIGO2Q86SJ2 522 aa15.98■□□□□ 0.15
TRIM56-202ENST00000412507 PRIMA1Q86XR5 153 aa15.98■□□□□ 0.15
TRIM56-202ENST00000412507 ERI1Q8IV48 349 aaKnown RBP15.98■□□□□ 0.15
TRIM56-202ENST00000412507 CCL17Q92583 94 aa15.98■□□□□ 0.15
TRIM56-202ENST00000412507 HPS1Q92902 700 aa15.98■□□□□ 0.15
TRIM56-202ENST00000412507 SPTSSAQ969W0 71 aa15.98■□□□□ 0.15
TRIM56-202ENST00000412507 SLAMF6Q96DU3 332 aa15.98■□□□□ 0.15
TRIM56-202ENST00000412507 DUS3LQ96G46 650 aaKnown RBP15.98■□□□□ 0.15
TRIM56-202ENST00000412507 ZNF799Q96GE5 643 aa15.98■□□□□ 0.15
TRIM56-202ENST00000412507 INTS14Q96SY0 518 aa15.98■□□□□ 0.15
TRIM56-202ENST00000412507 PAPOLBQ9NRJ5 636 aaKnown RBP15.98■□□□□ 0.15
TRIM56-202ENST00000412507 CENPMQ9NSP4 180 aa15.98■□□□□ 0.15
TRIM56-202ENST00000412507 DDX28Q9NUL7 540 aaKnown RBP15.98■□□□□ 0.15
TRIM56-202ENST00000412507 GSTT1P30711 240 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms