RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 ENTPD2Q9Y5L3 495 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 KANTRA0A1W2PQU2 76 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 TRAPPC2LH3BP13 241 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 PQBP1O60828 265 aaKnown RBP4.7□□□□□ -1.66
HERC4-205ENST00000412272 TNFSF13O75888 250 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 OR2F2O95006 317 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 CNIH1O95406 144 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 KITLGP21583 273 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 CHATP28329 748 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 OC90Q02509 493 aaPredicted RBP4.7□□□□□ -1.66
HERC4-205ENST00000412272 RAB40BQ12829 278 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 OR2F1Q13607 317 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 MEP1BQ16820 701 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 C9orf135Q5VTT2 229 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 TANGO2Q6ICL3 276 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 TMEM205Q6UW68 189 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 UNQ5815/PRO19632Q6UWF5 114 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 FAM180AQ6UWF9 173 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 ACOT7LQ6ZUV0 252 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 C10orf111Q8N326 155 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 TOMM5Q8N4H5 51 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 OR52I1Q8NGK6 324 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 OR5AK3PQ8NH89 298 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 GINS3Q9BRX5 216 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 DOHHQ9BU89 302 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 HDAC8Q9BY41 377 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 MAGEH1Q9H213 219 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 FZD8Q9H461 694 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 OR5AC2Q9NZP5 309 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 ZNF319Q9P2F9 582 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 CLN8Q9UBY8 286 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 IKZF2Q9UKS7 526 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 NYNRINQ9P2P1 1898 aaKnown RBP4.7□□□□□ -1.66
HERC4-205ENST00000412272 SHISA3A0PJX4 238 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 GGT3PA6NGU5 568 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 F5H5P2 479 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 F8VVB4 439 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 F8VWA3 439 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 TNFRSF11BO00300 401 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 ENTPD6O75354 484 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 CH25HO95992 272 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 HLA-DPB1P04440 258 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 ANXA4P09525 319 aaPredicted RBP4.7□□□□□ -1.66
HERC4-205ENST00000412272 BCKDHAP12694 445 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 GATA3P23771 443 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 DCTDP32321 178 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 AGTR2P50052 363 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 ART1P52961 327 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 NAAAQ02083 359 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 OLIG2Q13516 323 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 TEAD2Q15562 447 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 NSDHLQ15738 373 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 COX19Q49B96 90 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 WBP2NLQ6ICG8 309 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 FAM71E1Q6IPT2 247 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 WDR82Q6UXN9 313 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 ZNF562Q6V9R5 426 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 TMEM182Q6ZP80 229 aaPredicted RBP4.7□□□□□ -1.66
HERC4-205ENST00000412272 GPRIN1Q7Z2K8 1008 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 LRP11Q86VZ4 500 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 CMTM8Q8IZV2 173 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 SAMD12Q8N8I0 201 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 SMIM4Q8WVI0 70 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 SORCS1Q8WY21 1168 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 THAP4Q8WY91 577 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 DYRK2Q92630 601 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 PGLYRP2Q96PD5 576 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 LYSMD1Q96S90 227 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 ZNF471Q9BX82 626 aaPredicted RBP4.7□□□□□ -1.66
HERC4-205ENST00000412272 SGPP1Q9BX95 441 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 SLC5A7Q9GZV3 580 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 RBKSQ9H477 322 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 SLC32A1Q9H598 525 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 RRAGCQ9HB90 399 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 TMEM161AQ9NX61 479 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 PTGFRNQ9P2B2 879 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 PADI3Q9ULW8 664 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 CORO2BQ9UQ03 480 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 PSG8Q9UQ74 426 aa4.7□□□□□ -1.66
HERC4-205ENST00000412272 OR5B21A6NL26 309 aa4.69□□□□□ -1.66
HERC4-205ENST00000412272 RNASET2O00584 256 aaKnown RBP4.69□□□□□ -1.66
HERC4-205ENST00000412272 GPR39O43194 453 aa4.69□□□□□ -1.66
HERC4-205ENST00000412272 RBFOX2O43251 390 aaKnown RBP eCLIP4.69□□□□□ -1.662e-8■■□□□ 14.4
HERC4-205ENST00000412272 OR7C2O60412 319 aa4.69□□□□□ -1.66
HERC4-205ENST00000412272 CREBL2O60519 120 aaPredicted RBP4.69□□□□□ -1.66
HERC4-205ENST00000412272 SLC16A8O95907 504 aa4.69□□□□□ -1.66
HERC4-205ENST00000412272 EIF4EP06730 217 aaKnown RBP4.69□□□□□ -1.66
HERC4-205ENST00000412272 CHRM2P08172 466 aa4.69□□□□□ -1.66
HERC4-205ENST00000412272 CD22P20273 847 aa4.69□□□□□ -1.66
HERC4-205ENST00000412272 TM4SF1P30408 202 aa4.69□□□□□ -1.66
HERC4-205ENST00000412272 GATA4P43694 442 aa4.69□□□□□ -1.66
HERC4-205ENST00000412272 ASCL1P50553 236 aa4.69□□□□□ -1.66
HERC4-205ENST00000412272 MVDP53602 400 aa4.69□□□□□ -1.66
HERC4-205ENST00000412272 PGGT1BP53609 377 aa4.69□□□□□ -1.66
HERC4-205ENST00000412272 WDR5P61964 334 aaKnown RBP4.69□□□□□ -1.66
HERC4-205ENST00000412272 RPL32P62910 135 aaKnown RBP4.69□□□□□ -1.66
HERC4-205ENST00000412272 BTN3A2P78410 334 aa4.69□□□□□ -1.66
HERC4-205ENST00000412272 AESQ08117 197 aa4.69□□□□□ -1.66
HERC4-205ENST00000412272 RBBP7Q16576 425 aa4.69□□□□□ -1.66
HERC4-205ENST00000412272 SLC25A52Q3SY17 297 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms