RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 SYT4Q9H2B2 425 aa11.86□□□□□ -0.51
HLA-DQB2-229ENST00000411527 MMP27Q9H306 513 aa11.86□□□□□ -0.51
HLA-DQB2-229ENST00000411527 WDR76Q9H967 626 aa11.86□□□□□ -0.51
HLA-DQB2-229ENST00000411527 TMEM100Q9NV29 134 aa11.86□□□□□ -0.51
HLA-DQB2-229ENST00000411527 FAM220BPB1ANY3 271 aa11.85□□□□□ -0.51
HLA-DQB2-229ENST00000411527 C22orf46C9J442 243 aa11.85□□□□□ -0.51
HLA-DQB2-229ENST00000411527 IMPA2O14732 288 aa11.85□□□□□ -0.51
HLA-DQB2-229ENST00000411527 PHYHO14832 338 aa11.85□□□□□ -0.51
HLA-DQB2-229ENST00000411527 TIMM23O14925 209 aa11.85□□□□□ -0.51
HLA-DQB2-229ENST00000411527 ENSAO43768 121 aaKnown RBP11.85□□□□□ -0.51
HLA-DQB2-229ENST00000411527 IFNW1P05000 195 aa11.85□□□□□ -0.51
HLA-DQB2-229ENST00000411527 MELTFP08582 738 aa11.85□□□□□ -0.51
HLA-DQB2-229ENST00000411527 PRSS12P56730 875 aa11.85□□□□□ -0.51
HLA-DQB2-229ENST00000411527 KRR1Q13601 381 aaKnown RBP11.85□□□□□ -0.51
HLA-DQB2-229ENST00000411527 COQ5Q5HYK3 327 aa11.85□□□□□ -0.51
HLA-DQB2-229ENST00000411527 RHOUQ7L0Q8 258 aa11.85□□□□□ -0.51
HLA-DQB2-229ENST00000411527 RRM2BQ7LG56 351 aa11.85□□□□□ -0.51
HLA-DQB2-229ENST00000411527 VTCN1Q7Z7D3 282 aa11.85□□□□□ -0.51
HLA-DQB2-229ENST00000411527 TMEM86BQ8N661 226 aa11.85□□□□□ -0.51
HLA-DQB2-229ENST00000411527 FAM156AQ8NDB6 213 aa11.85□□□□□ -0.51
HLA-DQB2-229ENST00000411527 HCAR1Q9BXC0 346 aa11.85□□□□□ -0.51
HLA-DQB2-229ENST00000411527 NDEL1Q9GZM8 345 aa11.85□□□□□ -0.51
HLA-DQB2-229ENST00000411527 NMNAT1Q9HAN9 279 aaPredicted RBP11.85□□□□□ -0.51
HLA-DQB2-229ENST00000411527 ATPIF1Q9UII2 106 aa11.85□□□□□ -0.51
HLA-DQB2-229ENST00000411527 POLR1DQ9Y2S0 133 aa11.85□□□□□ -0.51
HLA-DQB2-229ENST00000411527 WNK1Q9H4A3 2382 aa11.85□□□□□ -0.51
HLA-DQB2-229ENST00000411527 ELOVL7A1L3X0 281 aa11.84□□□□□ -0.51
HLA-DQB2-229ENST00000411527 EDF1O60869 148 aaKnown RBP11.84□□□□□ -0.51
HLA-DQB2-229ENST00000411527 SFTPBP07988 381 aa11.84□□□□□ -0.51
HLA-DQB2-229ENST00000411527 GATA4P43694 442 aa11.84□□□□□ -0.51
HLA-DQB2-229ENST00000411527 CENPAP49450 140 aa11.84□□□□□ -0.51
HLA-DQB2-229ENST00000411527 KRTAP10-3P60369 221 aa11.84□□□□□ -0.51
HLA-DQB2-229ENST00000411527 HIST1H3AP68431 136 aa11.84□□□□□ -0.51
HLA-DQB2-229ENST00000411527 MAB21L1Q13394 359 aa11.84□□□□□ -0.51
HLA-DQB2-229ENST00000411527 KCNMB1Q16558 191 aa11.84□□□□□ -0.51
HLA-DQB2-229ENST00000411527 HIST2H3PS2Q5TEC6 136 aa11.84□□□□□ -0.51
HLA-DQB2-229ENST00000411527 ZNF620Q6ZNG0 422 aa11.84□□□□□ -0.51
HLA-DQB2-229ENST00000411527 HIST2H3AQ71DI3 136 aa11.84□□□□□ -0.51
HLA-DQB2-229ENST00000411527 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.84□□□□□ -0.51
HLA-DQB2-229ENST00000411527 GJC3Q8NFK1 279 aa11.84□□□□□ -0.51
HLA-DQB2-229ENST00000411527 OR11L1Q8NGX0 322 aa11.84□□□□□ -0.51
HLA-DQB2-229ENST00000411527 COQ7Q99807 217 aa11.84□□□□□ -0.51
HLA-DQB2-229ENST00000411527 PKP2Q99959 881 aa11.84□□□□□ -0.51
HLA-DQB2-229ENST00000411527 SIKE1Q9BRV8 207 aa11.84□□□□□ -0.51
HLA-DQB2-229ENST00000411527 NUAK2Q9H093 628 aa11.84□□□□□ -0.51
HLA-DQB2-229ENST00000411527 UFSP2Q9NUQ7 469 aa11.84□□□□□ -0.51
HLA-DQB2-229ENST00000411527 VSX1Q9NZR4 365 aaPredicted RBP11.84□□□□□ -0.51
HLA-DQB2-229ENST00000411527 KIF17Q9P2E2 1029 aa11.84□□□□□ -0.51
HLA-DQB2-229ENST00000411527 TMCC3Q9ULS5 477 aa11.84□□□□□ -0.51
HLA-DQB2-229ENST00000411527 RNF114Q9Y508 228 aa11.84□□□□□ -0.51
HLA-DQB2-229ENST00000411527 POMT1Q9Y6A1 747 aa11.84□□□□□ -0.51
HLA-DQB2-229ENST00000411527 PRKDCP78527 4128 aaKnown RBP11.84□□□□□ -0.51
HLA-DQB2-229ENST00000411527 CENPVL3A0A0U1RRI6 287 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 LOC100653049A0A140TA62 436 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 A0A1B0GWJ7 208 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 BBIP1A8MTZ0 92 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 ZNF879B4DU55 563 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 P2RY10O00398 339 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 SOCS2O14508 198 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 TNFRSF13BO14836 293 aaPredicted RBP11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 FAM20BO75063 409 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 PTP4A3O75365 173 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 KRT34O76011 436 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 TOX4O94842 621 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 NDUFB2O95178 105 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 ZNF682O95780 498 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 SDHAP31040 664 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 CFHR2P36980 270 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 PSMB10P40306 273 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 KLF10Q13118 480 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 PDCD1Q15116 288 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 MEP1BQ16820 701 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 RSPO1Q2MKA7 263 aaPredicted RBP11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 PRAMEF6Q5VXH4 476 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 CD276Q5ZPR3 534 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 GPR139Q6DWJ6 353 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 ASPHD2Q6ICH7 369 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 CORO6Q6QEF8 472 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 PTCHD4Q6ZW05 846 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 CELF2-AS1Q8N7Q2 184 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 TBC1D15Q8TC07 691 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 Q8TCH9 128 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 SSMEM1Q8WWF3 244 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 UBE2FQ969M7 185 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 ERGIC1Q969X5 290 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 FAM46AQ96IP4 442 aaKnown RBP11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 TECTBQ96PL2 329 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 RBM4BQ9BQ04 359 aaKnown RBP11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 TMEM120AQ9BXJ8 343 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 HDHD2Q9H0R4 259 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 MMADHCQ9H3L0 296 aaPredicted RBP11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 NRIP3Q9NQ35 241 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 GID8Q9NWU2 228 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 ARMCX1Q9P291 453 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 RPS6KA6Q9UK32 745 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 IER3IP1Q9Y5U9 82 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 LHFPL6Q9Y693 200 aa11.83□□□□□ -0.52
HLA-DQB2-229ENST00000411527 NOTCH1P46531 2555 aa11.82□□□□□ -0.52
HLA-DQB2-229ENST00000411527 LIPFP07098 398 aa11.82□□□□□ -0.52
HLA-DQB2-229ENST00000411527 NPY4RP50391 375 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms