RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 RCE1Q9Y256 329 aa12.05□□□□□ -0.48
LIMS1-205ENST00000410093 A0A0A6YYJ9 748 aa12.04□□□□□ -0.48
LIMS1-205ENST00000410093 IGKV1D-43A0A0B4J1Z2 117 aa12.04□□□□□ -0.48
LIMS1-205ENST00000410093 METTL21EPA6NDL7 271 aa12.04□□□□□ -0.48
LIMS1-205ENST00000410093 SYT7O43581 403 aa12.04□□□□□ -0.48
LIMS1-205ENST00000410093 CELA2AP08217 269 aa12.04□□□□□ -0.48
LIMS1-205ENST00000410093 BDKRB2P30411 391 aa12.04□□□□□ -0.48
LIMS1-205ENST00000410093 OTX2P32243 289 aa12.04□□□□□ -0.48
LIMS1-205ENST00000410093 PRSS3P35030 304 aa12.04□□□□□ -0.48
LIMS1-205ENST00000410093 CYB561P49447 251 aa12.04□□□□□ -0.48
LIMS1-205ENST00000410093 GZMKP49863 264 aa12.04□□□□□ -0.48
LIMS1-205ENST00000410093 TNK1Q13470 666 aa12.04□□□□□ -0.48
LIMS1-205ENST00000410093 INPP5JQ15735 1006 aaPredicted RBP12.04□□□□□ -0.48
LIMS1-205ENST00000410093 GSG1Q2KHT4 349 aa12.04□□□□□ -0.48
LIMS1-205ENST00000410093 ODF4Q2M2E3 257 aa12.04□□□□□ -0.48
LIMS1-205ENST00000410093 METTL11BQ5VVY1 283 aa12.04□□□□□ -0.48
LIMS1-205ENST00000410093 DTX3Q8N9I9 347 aa12.04□□□□□ -0.48
LIMS1-205ENST00000410093 DNAAF1Q8NEP3 725 aa12.04□□□□□ -0.48
LIMS1-205ENST00000410093 GJC3Q8NFK1 279 aa12.04□□□□□ -0.48
LIMS1-205ENST00000410093 GNRHR2Q96P88 292 aa12.04□□□□□ -0.48
LIMS1-205ENST00000410093 OR51J1Q9H342 316 aa12.04□□□□□ -0.48
LIMS1-205ENST00000410093 NELFAQ9H3P2 528 aa12.04□□□□□ -0.48
LIMS1-205ENST00000410093 RANBP3Q9H6Z4 567 aaPredicted RBP12.04□□□□□ -0.48
LIMS1-205ENST00000410093 TMEM185BQ9H7F4 350 aa12.04□□□□□ -0.48
LIMS1-205ENST00000410093 TAS2R4Q9NYW5 299 aa12.04□□□□□ -0.48
LIMS1-205ENST00000410093 ING4Q9UNL4 249 aa12.04□□□□□ -0.48
LIMS1-205ENST00000410093 LHFPL6Q9Y693 200 aa12.04□□□□□ -0.48
LIMS1-205ENST00000410093 ALPK2Q86TB3 2170 aa12.03□□□□□ -0.48
LIMS1-205ENST00000410093 A0A1B0GUH1 482 aa12.03□□□□□ -0.48
LIMS1-205ENST00000410093 ATP6V1G1O75348 118 aa12.03□□□□□ -0.48
LIMS1-205ENST00000410093 BPNT1O95861 308 aa12.03□□□□□ -0.48
LIMS1-205ENST00000410093 TTRP02766 147 aa12.03□□□□□ -0.48
LIMS1-205ENST00000410093 ACSM4P0C7M7 580 aa12.03□□□□□ -0.48
LIMS1-205ENST00000410093 MSR1P21757 451 aa12.03□□□□□ -0.48
LIMS1-205ENST00000410093 CCL1P22362 96 aa12.03□□□□□ -0.48
LIMS1-205ENST00000410093 ZNF84P51523 738 aa12.03□□□□□ -0.48
LIMS1-205ENST00000410093 CLDN17P56750 224 aa12.03□□□□□ -0.48
LIMS1-205ENST00000410093 CD83Q01151 205 aa12.03□□□□□ -0.48
LIMS1-205ENST00000410093 CCDC92Q53HC0 331 aaPredicted RBP12.03□□□□□ -0.48
LIMS1-205ENST00000410093 ACER2Q5QJU3 275 aa12.03□□□□□ -0.48
LIMS1-205ENST00000410093 PDSS1Q5T2R2 415 aa12.03□□□□□ -0.48
LIMS1-205ENST00000410093 HES3Q5TGS1 186 aa12.03□□□□□ -0.48
LIMS1-205ENST00000410093 SLC25A25Q6KCM7 469 aa12.03□□□□□ -0.48
LIMS1-205ENST00000410093 ZNF529Q6P280 563 aa12.03□□□□□ -0.48
LIMS1-205ENST00000410093 GLCCI1Q86VQ1 547 aa12.03□□□□□ -0.48
LIMS1-205ENST00000410093 BEST3Q8N1M1 668 aa12.03□□□□□ -0.48
LIMS1-205ENST00000410093 SLC22A24Q8N4F4 322 aa12.03□□□□□ -0.48
LIMS1-205ENST00000410093 OR9K2Q8NGE7 335 aa12.03□□□□□ -0.48
LIMS1-205ENST00000410093 OR51D1Q8NGF3 324 aa12.03□□□□□ -0.48
LIMS1-205ENST00000410093 OR6N1Q8NGY5 312 aa12.03□□□□□ -0.48
LIMS1-205ENST00000410093 C10orf35Q96D05 121 aa12.03□□□□□ -0.48
LIMS1-205ENST00000410093 RNF170Q96K19 258 aa12.03□□□□□ -0.48
LIMS1-205ENST00000410093 GON7Q9BXV9 100 aa12.03□□□□□ -0.48
LIMS1-205ENST00000410093 C20orf85Q9H1P6 137 aa12.03□□□□□ -0.48
LIMS1-205ENST00000410093 AUNIPQ9H7T9 357 aa12.03□□□□□ -0.48
LIMS1-205ENST00000410093 GPN1Q9HCN4 374 aaPredicted RBP12.03□□□□□ -0.48
LIMS1-205ENST00000410093 RAB22AQ9UL26 194 aa12.03□□□□□ -0.48
LIMS1-205ENST00000410093 MAP1BP46821 2468 aaKnown RBP12.03□□□□□ -0.48
LIMS1-205ENST00000410093 SPEGQ15772 3267 aa12.02□□□□□ -0.48
LIMS1-205ENST00000410093 TRAV6A0A075B6T7 132 aa12.02□□□□□ -0.48
LIMS1-205ENST00000410093 A0A087WV48 116 aa12.02□□□□□ -0.48
LIMS1-205ENST00000410093 TMEM272A0A1B0GTI8 110 aa12.02□□□□□ -0.48
LIMS1-205ENST00000410093 TEX51A0A1B0GUA7 166 aa12.02□□□□□ -0.48
LIMS1-205ENST00000410093 CIB4A0PJX0 185 aa12.02□□□□□ -0.48
LIMS1-205ENST00000410093 LDLRAD4O15165 306 aa12.02□□□□□ -0.48
LIMS1-205ENST00000410093 ALDOBP05062 364 aa12.02□□□□□ -0.48
LIMS1-205ENST00000410093 IL5P05113 134 aa12.02□□□□□ -0.48
LIMS1-205ENST00000410093 ANXA3P12429 323 aa12.02□□□□□ -0.48
LIMS1-205ENST00000410093 RAB3AP20336 220 aa12.02□□□□□ -0.48
LIMS1-205ENST00000410093 CNR1P21554 472 aa12.02□□□□□ -0.48
LIMS1-205ENST00000410093 CASRP41180 1078 aa12.02□□□□□ -0.48
LIMS1-205ENST00000410093 FAPQ12884 760 aa12.02□□□□□ -0.48
LIMS1-205ENST00000410093 BCL2A1Q16548 175 aa12.02□□□□□ -0.48
LIMS1-205ENST00000410093 GLYATL3Q5SZD4 288 aa12.02□□□□□ -0.48
LIMS1-205ENST00000410093 ZNF813Q6ZN06 617 aa12.02□□□□□ -0.48
LIMS1-205ENST00000410093 DOK3Q7L591 496 aa12.02□□□□□ -0.48
LIMS1-205ENST00000410093 MDGA2Q7Z553 956 aa12.02□□□□□ -0.48
LIMS1-205ENST00000410093 LYPD6Q86Y78 171 aa12.02□□□□□ -0.48
LIMS1-205ENST00000410093 IZUMO1Q8IYV9 350 aa12.02□□□□□ -0.48
LIMS1-205ENST00000410093 OR5M1Q8NGP8 315 aa12.02□□□□□ -0.48
LIMS1-205ENST00000410093 GRPEL2Q8TAA5 225 aa12.02□□□□□ -0.48
LIMS1-205ENST00000410093 ZFAND1Q8TCF1 268 aa12.02□□□□□ -0.48
LIMS1-205ENST00000410093 CAPSLQ8WWF8 208 aa12.02□□□□□ -0.48
LIMS1-205ENST00000410093 METTL17Q9H7H0 456 aaPredicted RBP12.02□□□□□ -0.48
LIMS1-205ENST00000410093 P4HTMQ9NXG6 502 aa12.02□□□□□ -0.48
LIMS1-205ENST00000410093 BOKQ9UMX3 212 aaPredicted RBP12.02□□□□□ -0.48
LIMS1-205ENST00000410093 SLC5A6Q9Y289 635 aa12.02□□□□□ -0.48
LIMS1-205ENST00000410093 CACNA1CQ13936 2221 aa12.02□□□□□ -0.49
LIMS1-205ENST00000410093 CACNA1BQ00975 2339 aa12.02□□□□□ -0.49
LIMS1-205ENST00000410093 CEP295Q9C0D2 2601 aa12.02□□□□□ -0.49
LIMS1-205ENST00000410093 SNRPGP15A8MWD9 76 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 ALX3O95076 343 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 MT-ND4P03905 459 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 LPLP06858 475 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 MELTFP08582 738 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 AKAIN1P0CW23 69 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 CPN1P15169 458 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 ENPP1P22413 925 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 HIST1H3AP68431 136 aa12.01□□□□□ -0.49
LIMS1-205ENST00000410093 C19orf57Q0VDD7 668 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms