RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 ZNF525Q8N782 197 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 TCEANCQ8N8B7 351 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 TMEM163Q8TC26 289 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 EME1Q96AY2 570 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 SLAMF6Q96DU3 332 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 ZNF799Q96GE5 643 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 C18orf12Q96KH6 178 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 PIMREGQ9BSJ6 248 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 TOR3AQ9H497 397 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 CENPMQ9NSP4 180 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 MYEF2Q9P2K5 600 aaKnown RBP9.34□□□□□ -0.91
CHMP3-205ENST00000409810 CR1P17927 2039 aa9.34□□□□□ -0.91
CHMP3-205ENST00000409810 LOC390937A0A1W2PQ73 354 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 SLC22A31A6NKX4 558 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 C17orf100A8MU93 164 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 TLX2O43763 284 aaPredicted RBP9.33□□□□□ -0.92
CHMP3-205ENST00000409810 SELENOFO60613 162 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 LCATP04180 440 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 LYNP07948 512 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 NAT2P11245 290 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 DAOP14920 347 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 RAC2P15153 192 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 SELEP16581 610 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 SLC2A5P22732 501 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 EPHA2P29317 976 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 MPV17P39210 176 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 ZNF81P51508 661 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 TNK1Q13470 666 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 CARTPTQ16568 116 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 ALKBH6Q3KRA9 238 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 FAM209AQ5JX71 171 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 DRAM2Q6UX65 266 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 DNM1P46Q6ZS02 220 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 ZBTB49Q6ZSB9 765 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 RHOUQ7L0Q8 258 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 TIGD4Q8IY51 512 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 CBR4Q8N4T8 237 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 ZNF540Q8NDQ6 660 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 BBS1Q8NFJ9 593 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 ST7LQ8TDW4 575 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 UBASH3BQ8TF42 649 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 COX4I2Q96KJ9 171 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 DIRC2Q96SL1 478 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 KCNJ15Q99712 375 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 C1QTNF5Q9BXJ0 243 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 SP140LQ9H930 580 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 DLL4Q9NR61 685 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 DECR2Q9NUI1 292 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 PTTG3PQ9NZH4 202 aa9.33□□□□□ -0.92
CHMP3-205ENST00000409810 TANC2Q9HCD6 1990 aa9.32□□□□□ -0.92
CHMP3-205ENST00000409810 TPD52L2O43399 206 aaKnown RBP9.32□□□□□ -0.92
CHMP3-205ENST00000409810 LY6HO94772 140 aa9.32□□□□□ -0.92
CHMP3-205ENST00000409810 INHBBP09529 407 aa9.32□□□□□ -0.92
CHMP3-205ENST00000409810 KITLGP21583 273 aa9.32□□□□□ -0.92
CHMP3-205ENST00000409810 TNFSF4P23510 183 aa9.32□□□□□ -0.92
CHMP3-205ENST00000409810 OTX1P32242 354 aaPredicted RBP9.32□□□□□ -0.92
CHMP3-205ENST00000409810 NAA10P41227 235 aaPredicted RBP9.32□□□□□ -0.92
CHMP3-205ENST00000409810 MRPS11P82912 194 aaKnown RBP9.32□□□□□ -0.92
CHMP3-205ENST00000409810 PSG7Q13046 419 aa9.32□□□□□ -0.92
CHMP3-205ENST00000409810 GGTLC2Q14390 218 aa9.32□□□□□ -0.92
CHMP3-205ENST00000409810 FBXW12Q6X9E4 464 aa9.32□□□□□ -0.92
CHMP3-205ENST00000409810 COLCA1Q6ZS62 124 aa9.32□□□□□ -0.92
CHMP3-205ENST00000409810 MEPCEQ7L2J0 689 aaKnown RBP9.32□□□□□ -0.92
CHMP3-205ENST00000409810 SLC16A9Q7RTY1 509 aa9.32□□□□□ -0.92
CHMP3-205ENST00000409810 BIVMQ86UB2 503 aa9.32□□□□□ -0.92
CHMP3-205ENST00000409810 ZCCHC24Q8N2G6 241 aaKnown RBP9.32□□□□□ -0.92
CHMP3-205ENST00000409810 ZNF786Q8N393 782 aa9.32□□□□□ -0.92
CHMP3-205ENST00000409810 ZNF283Q8N7M2 679 aa9.32□□□□□ -0.92
CHMP3-205ENST00000409810 OR10S1Q8NGN2 331 aa9.32□□□□□ -0.92
CHMP3-205ENST00000409810 OR8J1Q8NGP2 316 aa9.32□□□□□ -0.92
CHMP3-205ENST00000409810 OTOSQ8NHW6 89 aa9.32□□□□□ -0.92
CHMP3-205ENST00000409810 FAM81AQ8TBF8 368 aa9.32□□□□□ -0.92
CHMP3-205ENST00000409810 C10orf105Q8TEF2 133 aa9.32□□□□□ -0.92
CHMP3-205ENST00000409810 THEM6Q8WUY1 208 aa9.32□□□□□ -0.92
CHMP3-205ENST00000409810 RNF133Q8WVZ7 376 aa9.32□□□□□ -0.92
CHMP3-205ENST00000409810 TRUB1Q8WWH5 349 aaKnown RBP9.32□□□□□ -0.92
CHMP3-205ENST00000409810 CMBLQ96DG6 245 aa9.32□□□□□ -0.92
CHMP3-205ENST00000409810 CNN2Q99439 309 aaKnown RBP9.32□□□□□ -0.92
CHMP3-205ENST00000409810 MNTQ99583 582 aa9.32□□□□□ -0.92
CHMP3-205ENST00000409810 TEAD3Q99594 435 aa9.32□□□□□ -0.92
CHMP3-205ENST00000409810 ABHD6Q9BV23 337 aa9.32□□□□□ -0.92
CHMP3-205ENST00000409810 REG4Q9BYZ8 158 aa9.32□□□□□ -0.92
CHMP3-205ENST00000409810 YIPF3Q9GZM5 350 aa9.32□□□□□ -0.92
CHMP3-205ENST00000409810 OPA3Q9H6K4 179 aa9.32□□□□□ -0.92
CHMP3-205ENST00000409810 C8orf4Q9NR00 106 aa9.32□□□□□ -0.92
CHMP3-205ENST00000409810 IMPAD1Q9NX62 359 aa9.32□□□□□ -0.92
CHMP3-205ENST00000409810 NKIRAS2Q9NYR9 191 aa9.32□□□□□ -0.92
CHMP3-205ENST00000409810 LAMP5Q9UJQ1 280 aa9.32□□□□□ -0.92
CHMP3-205ENST00000409810 PURGQ9UJV8 347 aaKnown RBP9.32□□□□□ -0.92
CHMP3-205ENST00000409810 ZDHHC8Q9ULC8 765 aa9.32□□□□□ -0.92
CHMP3-205ENST00000409810 STARD10Q9Y365 291 aa9.32□□□□□ -0.92
CHMP3-205ENST00000409810 TMEM14AQ9Y6G1 99 aa9.32□□□□□ -0.92
CHMP3-205ENST00000409810 ABCA1O95477 2261 aa9.31□□□□□ -0.92
CHMP3-205ENST00000409810 IGHV4-30-2A0A087WSY4 118 aa9.31□□□□□ -0.92
CHMP3-205ENST00000409810 CCDC182A6NF36 153 aa9.31□□□□□ -0.92
CHMP3-205ENST00000409810 RNF223E7ERA6 249 aa9.31□□□□□ -0.92
CHMP3-205ENST00000409810 M0R129 80 aa9.31□□□□□ -0.92
CHMP3-205ENST00000409810 PHYHO14832 338 aa9.31□□□□□ -0.92
CHMP3-205ENST00000409810 SMAD7O15105 426 aaKnown RBP9.31□□□□□ -0.92
CHMP3-205ENST00000409810 H2BFMP0C1H6 154 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms