RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 CENPMQ9NSP4 180 aa19.13■□□□□ 0.65
PTCD3-203ENST00000409783 F8P00451 2351 aa19.12■□□□□ 0.65
PTCD3-203ENST00000409783 A0A1W2PPW3 197 aa19.12■□□□□ 0.65
PTCD3-203ENST00000409783 ZNF878C9JN71 531 aa19.12■□□□□ 0.65
PTCD3-203ENST00000409783 M0R135 149 aa19.12■□□□□ 0.65
PTCD3-203ENST00000409783 CASQ2O14958 399 aaPredicted RBP19.12■□□□□ 0.65
PTCD3-203ENST00000409783 LY6HO94772 140 aa19.12■□□□□ 0.65
PTCD3-203ENST00000409783 F12P00748 615 aaPredicted RBP19.12■□□□□ 0.65
PTCD3-203ENST00000409783 ALOX5APP20292 161 aa19.12■□□□□ 0.65
PTCD3-203ENST00000409783 PEX2P28328 305 aa19.12■□□□□ 0.65
PTCD3-203ENST00000409783 GCH1P30793 250 aa19.12■□□□□ 0.65
PTCD3-203ENST00000409783 HCCSP53701 268 aa19.12■□□□□ 0.65
PTCD3-203ENST00000409783 TPTEP56180 551 aa19.12■□□□□ 0.65
PTCD3-203ENST00000409783 SELENOVP59797 346 aa19.12■□□□□ 0.65
PTCD3-203ENST00000409783 PSG7Q13046 419 aa19.12■□□□□ 0.65
PTCD3-203ENST00000409783 ALKBH6Q3KRA9 238 aa19.12■□□□□ 0.65
PTCD3-203ENST00000409783 SPATC1Q76KD6 591 aa19.12■□□□□ 0.65
PTCD3-203ENST00000409783 RHOUQ7L0Q8 258 aa19.12■□□□□ 0.65
PTCD3-203ENST00000409783 GID4Q8IVV7 300 aa19.12■□□□□ 0.65
PTCD3-203ENST00000409783 TRUB1Q8WWH5 349 aaKnown RBP19.12■□□□□ 0.65
PTCD3-203ENST00000409783 ZNF799Q96GE5 643 aa19.12■□□□□ 0.65
PTCD3-203ENST00000409783 Q96MF0 132 aa19.12■□□□□ 0.65
PTCD3-203ENST00000409783 ZNF582Q96NG8 517 aaPredicted RBP19.12■□□□□ 0.65
PTCD3-203ENST00000409783 KCNJ15Q99712 375 aa19.12■□□□□ 0.65
PTCD3-203ENST00000409783 YIPF3Q9GZM5 350 aa19.12■□□□□ 0.65
PTCD3-203ENST00000409783 SLCO1C1Q9NYB5 712 aa19.12■□□□□ 0.65
PTCD3-203ENST00000409783 HAO2Q9NYQ3 351 aa19.12■□□□□ 0.65
PTCD3-203ENST00000409783 H2AFY2Q9P0M6 372 aaPredicted RBP19.12■□□□□ 0.65
PTCD3-203ENST00000409783 FLNAP21333 2647 aaKnown RBP19.11■□□□□ 0.65
PTCD3-203ENST00000409783 SLC22A31A6NKX4 558 aa19.11■□□□□ 0.65
PTCD3-203ENST00000409783 SSX4O60224 188 aa19.11■□□□□ 0.65
PTCD3-203ENST00000409783 LYNP07948 512 aa19.11■□□□□ 0.65
PTCD3-203ENST00000409783 MRPL3P09001 348 aaKnown RBP19.11■□□□□ 0.65
PTCD3-203ENST00000409783 OPRL1P41146 370 aa19.11■□□□□ 0.65
PTCD3-203ENST00000409783 MMP15P51511 669 aa19.11■□□□□ 0.65
PTCD3-203ENST00000409783 NUDT6P53370 316 aa19.11■□□□□ 0.65
PTCD3-203ENST00000409783 LRRC36Q1X8D7 754 aa19.11■□□□□ 0.65
PTCD3-203ENST00000409783 SLC25A30Q5SVS4 291 aa19.11■□□□□ 0.65
PTCD3-203ENST00000409783 FBXW12Q6X9E4 464 aa19.11■□□□□ 0.65
PTCD3-203ENST00000409783 GTF3AQ92664 365 aaKnown RBP19.11■□□□□ 0.65
PTCD3-203ENST00000409783 SPTSSAQ969W0 71 aa19.11■□□□□ 0.65
PTCD3-203ENST00000409783 COG8Q96MW5 612 aa19.11■□□□□ 0.65
PTCD3-203ENST00000409783 RDH12Q96NR8 316 aa19.11■□□□□ 0.65
PTCD3-203ENST00000409783 COPS4Q9BT78 406 aa19.11■□□□□ 0.65
PTCD3-203ENST00000409783 TMUB1Q9BVT8 246 aa19.11■□□□□ 0.65
PTCD3-203ENST00000409783 RAB1BQ9H0U4 201 aa19.11■□□□□ 0.65
PTCD3-203ENST00000409783 MS4A5Q9H3V2 200 aa19.11■□□□□ 0.65
PTCD3-203ENST00000409783 DCLRE1BQ9H816 532 aa19.11■□□□□ 0.65
PTCD3-203ENST00000409783 ADGRL4Q9HBW9 690 aa19.11■□□□□ 0.65
PTCD3-203ENST00000409783 FAM118AQ9NWS6 357 aa19.11■□□□□ 0.65
PTCD3-203ENST00000409783 NKX1-2Q9UD57 310 aaPredicted RBP19.11■□□□□ 0.65
PTCD3-203ENST00000409783 MED13LQ71F56 2210 aa19.1■□□□□ 0.65
PTCD3-203ENST00000409783 C5orf63A6NC05 138 aa19.1■□□□□ 0.65
PTCD3-203ENST00000409783 SLC16A6O15403 523 aa19.1■□□□□ 0.65
PTCD3-203ENST00000409783 NAT2P11245 290 aa19.1■□□□□ 0.65
PTCD3-203ENST00000409783 GABRB1P18505 474 aa19.1■□□□□ 0.65
PTCD3-203ENST00000409783 PRKXP51817 358 aa19.1■□□□□ 0.65
PTCD3-203ENST00000409783 SNRPGP62308 76 aaKnown RBP19.1■□□□□ 0.65
PTCD3-203ENST00000409783 CLEC12BQ2HXU8 276 aa19.1■□□□□ 0.65
PTCD3-203ENST00000409783 OGFRL1Q5TC84 451 aaPredicted RBP19.1■□□□□ 0.65
PTCD3-203ENST00000409783 DRAM2Q6UX65 266 aa19.1■□□□□ 0.65
PTCD3-203ENST00000409783 GALNT4Q8N4A0 578 aa19.1■□□□□ 0.65
PTCD3-203ENST00000409783 THEM6Q8WUY1 208 aa19.1■□□□□ 0.65
PTCD3-203ENST00000409783 HAVCR1Q96D42 359 aa19.1■□□□□ 0.65
PTCD3-203ENST00000409783 CMBLQ96DG6 245 aa19.1■□□□□ 0.65
PTCD3-203ENST00000409783 TPK1Q9H3S4 243 aa19.1■□□□□ 0.65
PTCD3-203ENST00000409783 SMPD3Q9NY59 655 aaPredicted RBP19.1■□□□□ 0.65
PTCD3-203ENST00000409783 PTTG3PQ9NZH4 202 aa19.1■□□□□ 0.65
PTCD3-203ENST00000409783 DNAJC27Q9NZQ0 273 aa19.1■□□□□ 0.65
PTCD3-203ENST00000409783 COPS3Q9UNS2 423 aa19.1■□□□□ 0.65
PTCD3-203ENST00000409783 ACANP16112 2415 aa19.09■□□□□ 0.65
PTCD3-203ENST00000409783 LOC100130705A0A1B0GUX0 176 aa19.09■□□□□ 0.65
PTCD3-203ENST00000409783 PRR32B1ATL7 298 aa19.09■□□□□ 0.65
PTCD3-203ENST00000409783 LCATP04180 440 aa19.09■□□□□ 0.65
PTCD3-203ENST00000409783 RAC2P15153 192 aa19.09■□□□□ 0.65
PTCD3-203ENST00000409783 KITLGP21583 273 aa19.09■□□□□ 0.65
PTCD3-203ENST00000409783 HTR1FP30939 366 aa19.09■□□□□ 0.65
PTCD3-203ENST00000409783 GRB2P62993 217 aaKnown RBP19.09■□□□□ 0.65
PTCD3-203ENST00000409783 HLXQ14774 488 aaPredicted RBP19.09■□□□□ 0.65
PTCD3-203ENST00000409783 NKPD1Q17RQ9 610 aa19.09■□□□□ 0.65
PTCD3-203ENST00000409783 PACRGLQ8N7B6 248 aa19.09■□□□□ 0.65
PTCD3-203ENST00000409783 OR5L1Q8NGL2 311 aa19.09■□□□□ 0.65
PTCD3-203ENST00000409783 NEU4Q8WWR8 484 aaPredicted RBP19.09■□□□□ 0.65
PTCD3-203ENST00000409783 CNN2Q99439 309 aaKnown RBP19.09■□□□□ 0.65
PTCD3-203ENST00000409783 C8orf4Q9NR00 106 aa19.09■□□□□ 0.65
PTCD3-203ENST00000409783 DLL4Q9NR61 685 aa19.09■□□□□ 0.65
PTCD3-203ENST00000409783 IMPAD1Q9NX62 359 aa19.09■□□□□ 0.65
PTCD3-203ENST00000409783 WARS2Q9UGM6 360 aaKnown RBP19.09■□□□□ 0.65
PTCD3-203ENST00000409783 PURGQ9UJV8 347 aaKnown RBP19.09■□□□□ 0.65
PTCD3-203ENST00000409783 GMPPBQ9Y5P6 360 aa19.09■□□□□ 0.65
PTCD3-203ENST00000409783 TRIM64A6NGJ6 449 aa19.08■□□□□ 0.64
PTCD3-203ENST00000409783 TRIM64BA6NI03 449 aa19.08■□□□□ 0.64
PTCD3-203ENST00000409783 C17orf100A8MU93 164 aa19.08■□□□□ 0.64
PTCD3-203ENST00000409783 SBK2P0C263 348 aa19.08■□□□□ 0.64
PTCD3-203ENST00000409783 SLC15A1P46059 708 aa19.08■□□□□ 0.64
PTCD3-203ENST00000409783 TAF13Q15543 124 aa19.08■□□□□ 0.64
PTCD3-203ENST00000409783 OCLNQ16625 522 aa19.08■□□□□ 0.64
PTCD3-203ENST00000409783 MOGQ16653 247 aa19.08■□□□□ 0.64
PTCD3-203ENST00000409783 SNAI3Q3KNW1 292 aa19.08■□□□□ 0.64
PTCD3-203ENST00000409783 PRSS45Q7RTY3 260 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms