RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 ATP6V1C1P21283 382 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 TBXA2RP21731 343 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 ELAVL4P26378 380 aaKnown RBP3.54□□□□□ -1.84
CLK1-203ENST00000409769 EVI2BP34910 448 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 GCKP35557 465 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 SOX3P41225 446 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 ACAA2P42765 397 aaKnown RBP3.54□□□□□ -1.84
CLK1-203ENST00000409769 OR3A2P47893 321 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 ZNF41P51814 821 aaPredicted RBP3.54□□□□□ -1.84
CLK1-203ENST00000409769 ZNF136P52737 540 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 PSMD4P55036 377 aaKnown RBP3.54□□□□□ -1.84
CLK1-203ENST00000409769 TMEM50BP56557 158 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 FBXW4P57775 412 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 CHRNB3Q05901 458 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 PLCXD2Q0VAA5 305 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 CDC20Q12834 499 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 OPCMLQ14982 345 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 CD226Q15762 336 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 ATP6AP1Q15904 470 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 ZNF791Q3KP31 576 aaPredicted RBP3.54□□□□□ -1.84
CLK1-203ENST00000409769 LIN52Q52LA3 116 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 IFI44LQ53G44 452 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 EIPR1Q53HC9 387 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 ZNF311Q5JNZ3 666 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 KRBOX4Q5JUW0 171 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 PDZK1Q5T2W1 519 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 MRPL2Q5T653 305 aaKnown RBP3.54□□□□□ -1.84
CLK1-203ENST00000409769 ATP1A1-AS1Q5TC04 95 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 APOOLQ6UXV4 268 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 FCRLAQ7L513 359 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 HMGN2P46Q86SG4 172 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 RPS19BP1Q86WX3 136 aaKnown RBP3.54□□□□□ -1.84
CLK1-203ENST00000409769 RBM45Q8IUH3 476 aaKnown RBP3.54□□□□□ -1.84
CLK1-203ENST00000409769 ZDHHC21Q8IVQ6 265 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 PEX5LQ8IYB4 626 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 C10orf67Q8IYJ2 551 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 DND1Q8IYX4 353 aaKnown RBP3.54□□□□□ -1.84
CLK1-203ENST00000409769 PRR22Q8IZ63 422 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 OR6T1Q8NGN1 323 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 OR52P1PQ8NH57 321 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 C9orf43Q8TAL5 461 aaPredicted RBP3.54□□□□□ -1.84
CLK1-203ENST00000409769 ZNF519Q8TB69 540 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 SLC22A8Q8TCC7 542 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 SPPL2AQ8TCT8 520 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 GEMIN6Q8WXD5 167 aaKnown RBP3.54□□□□□ -1.84
CLK1-203ENST00000409769 LZICQ8WZA0 190 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 STMN2Q93045 179 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 FER1L6-AS2Q96M78 137 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 SECISBP2Q96T21 854 aaKnown RBP3.54□□□□□ -1.84
CLK1-203ENST00000409769 VGLL1Q99990 258 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 OVOL2Q9BRP0 275 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 CHID1Q9BWS9 393 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 DEFB126Q9BYW3 111 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 NTN4Q9HB63 628 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 PROK2Q9HC23 129 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 EXOSC3Q9NQT5 275 aaKnown RBP3.54□□□□□ -1.84
CLK1-203ENST00000409769 UBQLN4Q9NRR5 601 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 AGPAT4Q9NRZ5 378 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 VNN3Q9NY84 501 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 C6orf203Q9P0P8 240 aaPredicted RBP3.54□□□□□ -1.84
CLK1-203ENST00000409769 SEC14L3Q9UDX4 400 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 MRTO4Q9UKD2 239 aaKnown RBP3.54□□□□□ -1.84
CLK1-203ENST00000409769 ANGPTL2Q9UKU9 493 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 ABCG2Q9UNQ0 655 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 AURKCQ9UQB9 309 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 YARS2Q9Y2Z4 477 aaKnown RBP3.54□□□□□ -1.84
CLK1-203ENST00000409769 OR10H1Q9Y4A9 318 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 WIPI2Q9Y4P8 454 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 CHCHD2Q9Y6H1 151 aaPredicted RBP3.54□□□□□ -1.84
CLK1-203ENST00000409769 ENPP4Q9Y6X5 453 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 V9GYQ6 96 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 NCOR2Q9Y618 2525 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 AKAP13Q12802 2813 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 ZNF407Q9C0G0 2248 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 IGF2RP11717 2491 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 BSNQ9UPA5 3926 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 LOC105371242A0A075B767 164 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 A0A0B4J2E0 115 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 A0A1B0GX12 115 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 ARGFXA6NJG6 315 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 ANXA2P2A6NMY6 339 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 C17orf51A8MQB3 221 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 EPM2AB3EWF7 344 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 hCG_2039718K7EN88 272 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 FAAHO00519 579 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 SOCS3O14543 225 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 CLOCKO15516 846 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 EIF4E2O60573 245 aaKnown RBP3.53□□□□□ -1.84
CLK1-203ENST00000409769 FMO6PO60774 539 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 REM1O75628 298 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 OR6B1O95007 311 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 DIRAS1O95057 198 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 LYPD3O95274 346 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 DUS4LO95620 317 aaKnown RBP3.53□□□□□ -1.84
CLK1-203ENST00000409769 MT-ND1P03886 318 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 THY1P04216 161 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 PTAFRP25105 342 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 FASP25445 335 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 HTR2AP28223 471 aa3.53□□□□□ -1.84
CLK1-203ENST00000409769 IL12BP29460 328 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms