RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 ATG5Q9H1Y0 275 aa17.79■□□□□ 0.44
USP39-204ENST00000409766 KMT2EQ8IZD2 1858 aa17.79■□□□□ 0.44
USP39-204ENST00000409766 AHCTF1Q8WYP5 2266 aa17.78■□□□□ 0.44
USP39-204ENST00000409766 RGS13O14921 159 aa17.78■□□□□ 0.44
USP39-204ENST00000409766 SMAD9O15198 467 aaKnown RBP17.78■□□□□ 0.44
USP39-204ENST00000409766 MT-CO3P00414 261 aa17.78■□□□□ 0.44
USP39-204ENST00000409766 ALDOBP05062 364 aa17.78■□□□□ 0.44
USP39-204ENST00000409766 GABRA1P14867 456 aa17.78■□□□□ 0.44
USP39-204ENST00000409766 STOMP27105 288 aa17.78■□□□□ 0.44
USP39-204ENST00000409766 ZNF121P58317 390 aaPredicted RBP17.78■□□□□ 0.44
USP39-204ENST00000409766 CDK10Q15131 360 aa17.78■□□□□ 0.44
USP39-204ENST00000409766 SGCAQ16586 387 aa17.78■□□□□ 0.44
USP39-204ENST00000409766 TMEM164Q5U3C3 297 aa17.78■□□□□ 0.44
USP39-204ENST00000409766 CDH24Q86UP0 819 aa17.78■□□□□ 0.44
USP39-204ENST00000409766 GIMAP1Q8WWP7 306 aa17.78■□□□□ 0.44
USP39-204ENST00000409766 SLC39A7Q92504 469 aa17.78■□□□□ 0.44
USP39-204ENST00000409766 TRAF4Q9BUZ4 470 aaPredicted RBP17.78■□□□□ 0.44
USP39-204ENST00000409766 GPR87Q9BY21 358 aa17.78■□□□□ 0.44
USP39-204ENST00000409766 FOXD3Q9UJU5 478 aaPredicted RBP17.78■□□□□ 0.44
USP39-204ENST00000409766 TERTO14746 1132 aaKnown RBP17.77■□□□□ 0.44
USP39-204ENST00000409766 MSR1P21757 451 aa17.77■□□□□ 0.44
USP39-204ENST00000409766 ERP29P30040 261 aaKnown RBP17.77■□□□□ 0.44
USP39-204ENST00000409766 BDKRB2P30411 391 aa17.77■□□□□ 0.44
USP39-204ENST00000409766 DLSTP36957 453 aa17.77■□□□□ 0.44
USP39-204ENST00000409766 GZMKP49863 264 aa17.77■□□□□ 0.44
USP39-204ENST00000409766 SUCLG1P53597 346 aaKnown RBP17.77■□□□□ 0.44
USP39-204ENST00000409766 CD276Q5ZPR3 534 aa17.77■□□□□ 0.44
USP39-204ENST00000409766 ZNF529Q6P280 563 aa17.77■□□□□ 0.44
USP39-204ENST00000409766 ADGRE4PQ86SQ3 457 aa17.77■□□□□ 0.44
USP39-204ENST00000409766 GGNQ86UU5 652 aa17.77■□□□□ 0.44
USP39-204ENST00000409766 OR11H7Q8NGC8 314 aa17.77■□□□□ 0.44
USP39-204ENST00000409766 OR8B12Q8NGG6 310 aa17.77■□□□□ 0.44
USP39-204ENST00000409766 OR4D6Q8NGJ1 314 aa17.77■□□□□ 0.44
USP39-204ENST00000409766 DEDD2Q8WXF8 326 aa17.77■□□□□ 0.44
USP39-204ENST00000409766 THOC3Q96J01 351 aaKnown RBP17.77■□□□□ 0.44
USP39-204ENST00000409766 SORCS2Q96PQ0 1159 aa17.77■□□□□ 0.44
USP39-204ENST00000409766 SF3B5Q9BWJ5 86 aaKnown RBP17.77■□□□□ 0.44
USP39-204ENST00000409766 NELFAQ9H3P2 528 aa17.77■□□□□ 0.44
USP39-204ENST00000409766 STMN3Q9NZ72 180 aa17.77■□□□□ 0.44
USP39-204ENST00000409766 ZNF319Q9P2F9 582 aa17.77■□□□□ 0.44
USP39-204ENST00000409766 FLVCR2Q9UPI3 526 aa17.77■□□□□ 0.44
USP39-204ENST00000409766 BOLA1Q9Y3E2 137 aa17.77■□□□□ 0.44
USP39-204ENST00000409766 A0A1B0GVI7 797 aa17.77■□□□□ 0.43
USP39-204ENST00000409766 FAM172BPA6NC97 362 aa17.77■□□□□ 0.43
USP39-204ENST00000409766 C21orf140B9A014 251 aa17.77■□□□□ 0.43
USP39-204ENST00000409766 PEX14O75381 377 aa17.77■□□□□ 0.43
USP39-204ENST00000409766 SLC2A1P11166 492 aa17.77■□□□□ 0.43
USP39-204ENST00000409766 GNALP38405 381 aa17.77■□□□□ 0.43
USP39-204ENST00000409766 GUCA1AP43080 201 aaPredicted RBP17.77■□□□□ 0.43
USP39-204ENST00000409766 SELENOPP49908 381 aa17.77■□□□□ 0.43
USP39-204ENST00000409766 FAPQ12884 760 aa17.77■□□□□ 0.43
USP39-204ENST00000409766 EIF3IQ13347 325 aaKnown RBP17.77■□□□□ 0.43
USP39-204ENST00000409766 ST3GAL2Q16842 350 aa17.77■□□□□ 0.43
USP39-204ENST00000409766 FAAP20Q6NZ36 180 aa17.77■□□□□ 0.43
USP39-204ENST00000409766 OR1M1Q8NGA1 313 aa17.77■□□□□ 0.43
USP39-204ENST00000409766 OR5D14Q8NGL3 314 aa17.77■□□□□ 0.43
USP39-204ENST00000409766 NABP1Q96AH0 204 aa17.77■□□□□ 0.43
USP39-204ENST00000409766 TMEM138Q9NPI0 162 aa17.77■□□□□ 0.43
USP39-204ENST00000409766 NKIRAS2Q9NYR9 191 aa17.77■□□□□ 0.43
USP39-204ENST00000409766 MRPS18CQ9Y3D5 142 aaKnown RBP17.77■□□□□ 0.43
USP39-204ENST00000409766 ZNF806P0C7X5 589 aa17.76■□□□□ 0.43
USP39-204ENST00000409766 ANOS1P23352 680 aa17.76■□□□□ 0.43
USP39-204ENST00000409766 CTSSP25774 331 aa17.76■□□□□ 0.43
USP39-204ENST00000409766 CX3CR1P49238 355 aa17.76■□□□□ 0.43
USP39-204ENST00000409766 GRB2P62993 217 aaKnown RBP17.76■□□□□ 0.43
USP39-204ENST00000409766 OC90Q02509 493 aaPredicted RBP17.76■□□□□ 0.43
USP39-204ENST00000409766 GUCA2AQ02747 115 aa17.76■□□□□ 0.43
USP39-204ENST00000409766 PCGF3Q3KNV8 242 aa17.76■□□□□ 0.43
USP39-204ENST00000409766 PTX4Q96A99 478 aa17.76■□□□□ 0.43
USP39-204ENST00000409766 INTS12Q96CB8 462 aaKnown RBP17.76■□□□□ 0.43
USP39-204ENST00000409766 CNTD2Q9H8S5 307 aa17.76■□□□□ 0.43
USP39-204ENST00000409766 PLSCR3Q9NRY6 295 aa17.76■□□□□ 0.43
USP39-204ENST00000409766 TAS2R8Q9NYW2 309 aa17.76■□□□□ 0.43
USP39-204ENST00000409766 KNTC1P50748 2209 aa17.76■□□□□ 0.43
USP39-204ENST00000409766 DHHO43323 396 aa17.76■□□□□ 0.43
USP39-204ENST00000409766 PRSS3P35030 304 aa17.76■□□□□ 0.43
USP39-204ENST00000409766 CARD18P57730 90 aa17.76■□□□□ 0.43
USP39-204ENST00000409766 ENDOGQ14249 297 aaKnown RBP17.76■□□□□ 0.43
USP39-204ENST00000409766 BEST4Q8NFU0 473 aa17.76■□□□□ 0.43
USP39-204ENST00000409766 OR52N4Q8NGI2 321 aa17.76■□□□□ 0.43
USP39-204ENST00000409766 CDC6Q99741 560 aa17.76■□□□□ 0.43
USP39-204ENST00000409766 PINLYPA6NC86 204 aa17.75■□□□□ 0.43
USP39-204ENST00000409766 F10P00742 488 aa17.75■□□□□ 0.43
USP39-204ENST00000409766 CSF1P09603 554 aa17.75■□□□□ 0.43
USP39-204ENST00000409766 CNR1P21554 472 aa17.75■□□□□ 0.43
USP39-204ENST00000409766 CAPZA1P52907 286 aa17.75■□□□□ 0.43
USP39-204ENST00000409766 FOXO1Q12778 655 aa17.75■□□□□ 0.43
USP39-204ENST00000409766 LINC00303Q3SY05 128 aa17.75■□□□□ 0.43
USP39-204ENST00000409766 WIPI1Q5MNZ9 446 aaPredicted RBP17.75■□□□□ 0.43
USP39-204ENST00000409766 DHRS13Q6UX07 377 aa17.75■□□□□ 0.43
USP39-204ENST00000409766 C20orf196Q8IYI0 205 aa17.75■□□□□ 0.43
USP39-204ENST00000409766 PNPLA2Q96AD5 504 aa17.75■□□□□ 0.43
USP39-204ENST00000409766 EDEM2Q9BV94 578 aa17.75■□□□□ 0.43
USP39-204ENST00000409766 OR10A4Q9H209 315 aa17.75■□□□□ 0.43
USP39-204ENST00000409766 LRFN1Q9P244 771 aa17.75■□□□□ 0.43
USP39-204ENST00000409766 SMLR1H3BR10 107 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 CCL1P22362 96 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 RCVRNP35243 200 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 VEGFCP49767 419 aa17.74■□□□□ 0.43
USP39-204ENST00000409766 TNK1Q13470 666 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms