RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 TPPP2P59282 170 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 ZNF77Q15935 545 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 TATDN3Q17R31 274 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 KCTD11Q693B1 232 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 KDM4DQ6B0I6 523 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 RSPO2Q6UXX9 243 aaPredicted RBP7.65□□□□□ -1.18
SCN9A-203ENST00000409672 B3GNT8Q7Z7M8 397 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 CSF3RQ99062 836 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 RABL2AQ9UBK7 228 aaPredicted RBP7.65□□□□□ -1.18
SCN9A-203ENST00000409672 RABL2BQ9UNT1 228 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 VIRMAQ69YN4 1812 aaKnown RBP7.65□□□□□ -1.18
SCN9A-203ENST00000409672 C5P01031 1676 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 CSNK1DP48730 415 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 FRMPD2BQ6IN97 320 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 TMEM88Q6PEY1 159 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 ADGRG3Q86Y34 549 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 ZDHHC23Q8IYP9 409 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 ZNFX1Q9P2E3 1918 aaKnown RBP7.65□□□□□ -1.18
SCN9A-203ENST00000409672 SHPRHQ149N8 1683 aa7.65□□□□□ -1.18
SCN9A-203ENST00000409672 LRRC3CA6NJW4 275 aa7.65□□□□□ -1.19
SCN9A-203ENST00000409672 RTL6Q6ICC9 239 aa7.65□□□□□ -1.19
SCN9A-203ENST00000409672 OR4F5Q8NH21 305 aa7.65□□□□□ -1.19
SCN9A-203ENST00000409672 OR4F4Q96R69 305 aa7.65□□□□□ -1.19
SCN9A-203ENST00000409672 ACSS1Q9NUB1 689 aaPredicted RBP7.65□□□□□ -1.19
SCN9A-203ENST00000409672 MED9Q9NWA0 146 aa7.65□□□□□ -1.19
SCN9A-203ENST00000409672 IGKV3D-11A0A0A0MRZ8 115 aa7.65□□□□□ -1.19
SCN9A-203ENST00000409672 IGKV3-11P04433 115 aa7.65□□□□□ -1.19
SCN9A-203ENST00000409672 NQO2P16083 231 aa7.65□□□□□ -1.19
SCN9A-203ENST00000409672 SPRED1Q7Z699 444 aa7.65□□□□□ -1.19
SCN9A-203ENST00000409672 ADAT1Q9BUB4 502 aaKnown RBP7.65□□□□□ -1.19
SCN9A-203ENST00000409672 ABHD14AQ9BUJ0 271 aa7.65□□□□□ -1.19
SCN9A-203ENST00000409672 METTL17Q9H7H0 456 aaPredicted RBP7.65□□□□□ -1.19
SCN9A-203ENST00000409672 GMPR2Q9P2T1 348 aaKnown RBP7.65□□□□□ -1.19
SCN9A-203ENST00000409672 RALYQ9UKM9 306 aaKnown RBP7.65□□□□□ -1.19
SCN9A-203ENST00000409672 MYOM1P52179 1685 aa7.65□□□□□ -1.19
SCN9A-203ENST00000409672 CRYBG1Q9Y4K1 1723 aa7.65□□□□□ -1.19
SCN9A-203ENST00000409672 ACKR3P25106 362 aa7.65□□□□□ -1.19
SCN9A-203ENST00000409672 RBP2P50120 134 aa7.65□□□□□ -1.19
SCN9A-203ENST00000409672 ELAVL1Q15717 326 aaKnown RBP7.65□□□□□ -1.19
SCN9A-203ENST00000409672 SLCO2A1Q92959 643 aa7.65□□□□□ -1.19
SCN9A-203ENST00000409672 ERGIC1Q969X5 290 aa7.65□□□□□ -1.19
SCN9A-203ENST00000409672 NXF2Q9GZY0 626 aaKnown RBP7.65□□□□□ -1.19
SCN9A-203ENST00000409672 GPR84Q9NQS5 396 aa7.65□□□□□ -1.19
SCN9A-203ENST00000409672 TRGV10A0A0A0MS01 117 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 M0R135 149 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 MT-CO3P00414 261 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 HPNP05981 417 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 ACP2P11117 423 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 TMEM41BQ5BJD5 291 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 B3GNTL1Q67FW5 361 aaPredicted RBP7.64□□□□□ -1.19
SCN9A-203ENST00000409672 SPNS2Q8IVW8 549 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 ZNF799Q96GE5 643 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 RAB1BQ9H0U4 201 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 SLC26A1Q9H2B4 701 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 SLC35D1Q9NTN3 355 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 SULT1C2O00338 296 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 DLL1O00548 723 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 GATCO43716 136 aaKnown RBP7.64□□□□□ -1.19
SCN9A-203ENST00000409672 SCGB1C2P0DMR2 95 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 FOXK2Q01167 660 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 GK3PQ14409 553 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 ARHGEF39Q8N4T4 335 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 MAGT1Q9H0U3 335 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 CLMPQ9H6B4 373 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 TAPBPO15533 448 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 NFYAP23511 347 aaPredicted RBP7.64□□□□□ -1.19
SCN9A-203ENST00000409672 LCN15Q6UWW0 184 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 DRAM2Q6UX65 266 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 LYG1Q8N1E2 194 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 CLDN22Q8N7P3 220 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 SLC30A7Q8NEW0 376 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 LILRB1Q8NHL6 650 aaPredicted RBP7.64□□□□□ -1.19
SCN9A-203ENST00000409672 RFESDQ8TAC1 157 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 HSD17B10Q99714 261 aaKnown RBP7.64□□□□□ -1.19
SCN9A-203ENST00000409672 PPIL1Q9Y3C6 166 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 A0A0B4J203 849 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 H3BP45 60 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 SLC35E2P0CK97 266 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 TMIGD3P0DMS9 266 aaPredicted RBP7.64□□□□□ -1.19
SCN9A-203ENST00000409672 SRMP19623 302 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 CA6P23280 308 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 C20orf196Q8IYI0 205 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 LSMEM2Q8N112 164 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 CBARPQ8N350 705 aaPredicted RBP7.64□□□□□ -1.19
SCN9A-203ENST00000409672 KDF1Q8NAX2 398 aaPredicted RBP7.64□□□□□ -1.19
SCN9A-203ENST00000409672 KIR3DX1Q9H7L2 352 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 UFC1Q9Y3C8 167 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 TIMM10BQ9Y5J6 103 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 A0A087WV62 115 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 PATE3B3GLJ2 98 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 RNASEK-C17orf49H0YIS7 233 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 PLPP1O14494 284 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 APOBEC1P41238 236 aaKnown RBP7.64□□□□□ -1.19
SCN9A-203ENST00000409672 PROX2Q3B8N5 592 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 GRINAQ7Z429 371 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 UBTD2Q8WUN7 234 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 SLAMF6Q96DU3 332 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 FABP1P07148 127 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 ALOX5APP20292 161 aa7.64□□□□□ -1.19
SCN9A-203ENST00000409672 HOXA4Q00056 320 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms