RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 RNF4P78317 190 aa11.99□□□□□ -0.49
COL6A2-204ENST00000409416 TUSC1Q2TAM9 212 aa11.99□□□□□ -0.49
COL6A2-204ENST00000409416 MANEAQ5SRI9 462 aa11.99□□□□□ -0.49
COL6A2-204ENST00000409416 AWAT2Q6E213 333 aa11.99□□□□□ -0.49
COL6A2-204ENST00000409416 CMIPQ8IY22 773 aa11.99□□□□□ -0.49
COL6A2-204ENST00000409416 OR6M1Q8NGM8 313 aa11.99□□□□□ -0.49
COL6A2-204ENST00000409416 STK35Q8TDR2 534 aa11.99□□□□□ -0.49
COL6A2-204ENST00000409416 ST8SIA4Q92187 359 aa11.99□□□□□ -0.49
COL6A2-204ENST00000409416 PHYHIPQ92561 330 aa11.99□□□□□ -0.49
COL6A2-204ENST00000409416 DCBLD2Q96PD2 775 aa11.99□□□□□ -0.49
COL6A2-204ENST00000409416 PARP12Q9H0J9 701 aaKnown RBP11.99□□□□□ -0.49
COL6A2-204ENST00000409416 NPDC1Q9NQX5 325 aaPredicted RBP11.99□□□□□ -0.49
COL6A2-204ENST00000409416 ABCA1O95477 2261 aa11.99□□□□□ -0.49
COL6A2-204ENST00000409416 CACNA1BQ00975 2339 aa11.99□□□□□ -0.49
COL6A2-204ENST00000409416 IGKV1D-43A0A0B4J1Z2 117 aa11.99□□□□□ -0.49
COL6A2-204ENST00000409416 SULT2B1O00204 365 aa11.99□□□□□ -0.49
COL6A2-204ENST00000409416 SULT1B1O43704 296 aa11.99□□□□□ -0.49
COL6A2-204ENST00000409416 CYB5AP00167 134 aa11.99□□□□□ -0.49
COL6A2-204ENST00000409416 PNLIPP16233 465 aa11.99□□□□□ -0.49
COL6A2-204ENST00000409416 ZNF43P17038 809 aa11.99□□□□□ -0.49
COL6A2-204ENST00000409416 EFNA3P52797 238 aa11.99□□□□□ -0.49
COL6A2-204ENST00000409416 RASGEF1BQ0VAM2 473 aa11.99□□□□□ -0.49
COL6A2-204ENST00000409416 SKP2Q13309 424 aa11.99□□□□□ -0.49
COL6A2-204ENST00000409416 GK2Q14410 553 aaPredicted RBP11.99□□□□□ -0.49
COL6A2-204ENST00000409416 SGCBQ16585 318 aa11.99□□□□□ -0.49
COL6A2-204ENST00000409416 ELFN2Q5R3F8 820 aa11.99□□□□□ -0.49
COL6A2-204ENST00000409416 LCN10Q6JVE6 187 aa11.99□□□□□ -0.49
COL6A2-204ENST00000409416 FAM122BQ7Z309 247 aa11.99□□□□□ -0.49
COL6A2-204ENST00000409416 CDC20BQ86Y33 519 aa11.99□□□□□ -0.49
COL6A2-204ENST00000409416 ZNF440Q8IYI8 595 aa11.99□□□□□ -0.49
COL6A2-204ENST00000409416 ZNF615Q8N8J6 731 aa11.99□□□□□ -0.49
COL6A2-204ENST00000409416 C4orf45Q96LM5 186 aa11.99□□□□□ -0.49
COL6A2-204ENST00000409416 COMMD9Q9P000 198 aa11.99□□□□□ -0.49
COL6A2-204ENST00000409416 RHBDD3Q9Y3P4 386 aa11.99□□□□□ -0.49
COL6A2-204ENST00000409416 PLSCR5A0PG75 271 aa11.98□□□□□ -0.49
COL6A2-204ENST00000409416 NPIPB9F8W1W9 429 aa11.98□□□□□ -0.49
COL6A2-204ENST00000409416 H7C417 338 aa11.98□□□□□ -0.49
COL6A2-204ENST00000409416 CXADRP78310 365 aa11.98□□□□□ -0.49
COL6A2-204ENST00000409416 MRPS10P82664 201 aaKnown RBP11.98□□□□□ -0.49
COL6A2-204ENST00000409416 ELAVL1Q15717 326 aaKnown RBP11.98□□□□□ -0.49
COL6A2-204ENST00000409416 LYSMD4Q5XG99 296 aa11.98□□□□□ -0.49
COL6A2-204ENST00000409416 C20orf196Q8IYI0 205 aa11.98□□□□□ -0.49
COL6A2-204ENST00000409416 ZNF454Q8N9F8 522 aa11.98□□□□□ -0.49
COL6A2-204ENST00000409416 ZNF471Q9BX82 626 aaPredicted RBP11.98□□□□□ -0.49
COL6A2-204ENST00000409416 ZCCHC4Q9H5U6 513 aa11.98□□□□□ -0.49
COL6A2-204ENST00000409416 MTFP1Q9UDX5 166 aa11.98□□□□□ -0.49
COL6A2-204ENST00000409416 OPN4Q9UHM6 478 aa11.98□□□□□ -0.49
COL6A2-204ENST00000409416 ETV7Q9Y603 341 aa11.98□□□□□ -0.49
COL6A2-204ENST00000409416 LOC107986453A0A1B0GWG9 222 aa11.98□□□□□ -0.49
COL6A2-204ENST00000409416 MFAP5Q13361 173 aa11.98□□□□□ -0.49
COL6A2-204ENST00000409416 HNF4GQ14541 408 aa11.98□□□□□ -0.49
COL6A2-204ENST00000409416 SLC9A3R2Q15599 337 aa11.98□□□□□ -0.49
COL6A2-204ENST00000409416 KCTD18Q6PI47 426 aaPredicted RBP11.98□□□□□ -0.49
COL6A2-204ENST00000409416 ZNF546Q86UE3 836 aa11.98□□□□□ -0.49
COL6A2-204ENST00000409416 NAA40Q86UY6 237 aa11.98□□□□□ -0.49
COL6A2-204ENST00000409416 STEAP2Q8NFT2 490 aa11.98□□□□□ -0.49
COL6A2-204ENST00000409416 LIN37Q96GY3 246 aaPredicted RBP11.98□□□□□ -0.49
COL6A2-204ENST00000409416 TMEM82A0PJX8 343 aa11.98□□□□□ -0.49
COL6A2-204ENST00000409416 ZNF878C9JN71 531 aa11.98□□□□□ -0.49
COL6A2-204ENST00000409416 CRTAPO75718 401 aaPredicted RBP11.98□□□□□ -0.49
COL6A2-204ENST00000409416 PMP2P02689 132 aa11.98□□□□□ -0.49
COL6A2-204ENST00000409416 SERPINA2P20848 420 aa11.98□□□□□ -0.49
COL6A2-204ENST00000409416 RPS4XP62701 263 aaKnown RBP11.98□□□□□ -0.49
COL6A2-204ENST00000409416 C21orf62-AS1Q17RA5 79 aa11.98□□□□□ -0.49
COL6A2-204ENST00000409416 EXOSC6Q5RKV6 272 aaKnown RBP11.98□□□□□ -0.49
COL6A2-204ENST00000409416 SHEQ5VZ18 495 aa11.98□□□□□ -0.49
COL6A2-204ENST00000409416 GLT8D1Q68CQ7 371 aa11.98□□□□□ -0.49
COL6A2-204ENST00000409416 PPP1R3BQ86XI6 285 aa11.98□□□□□ -0.49
COL6A2-204ENST00000409416 GALNT16Q8N428 558 aa11.98□□□□□ -0.49
COL6A2-204ENST00000409416 BHLHE23Q8NDY6 225 aa11.98□□□□□ -0.49
COL6A2-204ENST00000409416 NEK7Q8TDX7 302 aa11.98□□□□□ -0.49
COL6A2-204ENST00000409416 LRFN5Q96NI6 719 aa11.98□□□□□ -0.49
COL6A2-204ENST00000409416 PTGES2Q9H7Z7 377 aa11.98□□□□□ -0.49
COL6A2-204ENST00000409416 EMC3Q9P0I2 261 aa11.98□□□□□ -0.49
COL6A2-204ENST00000409416 MLXQ9UH92 298 aa11.98□□□□□ -0.49
COL6A2-204ENST00000409416 LRP12Q9Y561 859 aa11.98□□□□□ -0.49
COL6A2-204ENST00000409416 TMEM272A0A1B0GTI8 110 aa11.97□□□□□ -0.49
COL6A2-204ENST00000409416 KLK3P07288 261 aaPredicted RBP11.97□□□□□ -0.49
COL6A2-204ENST00000409416 POU2F2P09086 479 aa11.97□□□□□ -0.49
COL6A2-204ENST00000409416 PPP3CBP16298 524 aa11.97□□□□□ -0.49
COL6A2-204ENST00000409416 GNB3P16520 340 aa11.97□□□□□ -0.49
COL6A2-204ENST00000409416 GABRR1P24046 479 aa11.97□□□□□ -0.49
COL6A2-204ENST00000409416 IL10RAQ13651 578 aa11.97□□□□□ -0.49
COL6A2-204ENST00000409416 TRIM61Q5EBN2 209 aa11.97□□□□□ -0.49
COL6A2-204ENST00000409416 PDZD9Q8IXQ8 264 aa11.97□□□□□ -0.49
COL6A2-204ENST00000409416 GABRG1Q8N1C3 465 aa11.97□□□□□ -0.49
COL6A2-204ENST00000409416 OR1J2Q8NGS2 313 aa11.97□□□□□ -0.49
COL6A2-204ENST00000409416 PPA2Q9H2U2 334 aa11.97□□□□□ -0.49
COL6A2-204ENST00000409416 PCDHB16Q9NRJ7 776 aa11.97□□□□□ -0.49
COL6A2-204ENST00000409416 PISDQ9UG56 409 aa11.97□□□□□ -0.49
COL6A2-204ENST00000409416 LOC100289279A0A1B0GTE1 492 aa11.97□□□□□ -0.49
COL6A2-204ENST00000409416 FAM230AA0A1W2PPH8 454 aa11.97□□□□□ -0.49
COL6A2-204ENST00000409416 NUDT21O43809 227 aaKnown RBP11.97□□□□□ -0.49
COL6A2-204ENST00000409416 RLN2P04090 185 aa11.97□□□□□ -0.49
COL6A2-204ENST00000409416 HTR2CP28335 458 aa11.97□□□□□ -0.49
COL6A2-204ENST00000409416 SLC25A1P53007 311 aa11.97□□□□□ -0.49
COL6A2-204ENST00000409416 S100A10P60903 97 aa11.97□□□□□ -0.49
COL6A2-204ENST00000409416 MFSD13AQ14CX5 517 aa11.97□□□□□ -0.49
COL6A2-204ENST00000409416 FAM209BQ5JX69 171 aa11.97□□□□□ -0.49
COL6A2-204ENST00000409416 RNF144BQ7Z419 303 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms