RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 CLEC12BQ2HXU8 276 aa12.48□□□□□ -0.41
CDPF1-203ENST00000404583 NXNL2Q5VZ03 156 aa12.48□□□□□ -0.41
CDPF1-203ENST00000404583 MBNL2Q5VZF2 373 aaKnown RBP12.48□□□□□ -0.41
CDPF1-203ENST00000404583 FAM81AQ8TBF8 368 aa12.48□□□□□ -0.41
CDPF1-203ENST00000404583 IPCEF1Q8WWN9 437 aaPredicted RBP12.48□□□□□ -0.41
CDPF1-203ENST00000404583 UBE2FQ969M7 185 aa12.48□□□□□ -0.41
CDPF1-203ENST00000404583 HRASLS5Q96KN8 279 aa12.48□□□□□ -0.41
CDPF1-203ENST00000404583 AMELYQ99218 206 aa12.48□□□□□ -0.41
CDPF1-203ENST00000404583 COPS4Q9BT78 406 aa12.48□□□□□ -0.41
CDPF1-203ENST00000404583 RAB1BQ9H0U4 201 aa12.48□□□□□ -0.41
CDPF1-203ENST00000404583 DDX28Q9NUL7 540 aaKnown RBP12.48□□□□□ -0.41
CDPF1-203ENST00000404583 ZNF878C9JN71 531 aa12.47□□□□□ -0.41
CDPF1-203ENST00000404583 M0R135 149 aa12.47□□□□□ -0.41
CDPF1-203ENST00000404583 MRPL3P09001 348 aaKnown RBP12.47□□□□□ -0.41
CDPF1-203ENST00000404583 PRKXP51817 358 aa12.47□□□□□ -0.41
CDPF1-203ENST00000404583 CDC42P60953 191 aa12.47□□□□□ -0.41
CDPF1-203ENST00000404583 PSG7Q13046 419 aa12.47□□□□□ -0.41
CDPF1-203ENST00000404583 TAF13Q15543 124 aa12.47□□□□□ -0.41
CDPF1-203ENST00000404583 TRIP10Q15642 601 aa12.47□□□□□ -0.41
CDPF1-203ENST00000404583 LCN1P1Q5VSP4 162 aa12.47□□□□□ -0.41
CDPF1-203ENST00000404583 LPCAT4Q643R3 524 aa12.47□□□□□ -0.41
CDPF1-203ENST00000404583 GALNT4Q8N4A0 578 aa12.47□□□□□ -0.41
CDPF1-203ENST00000404583 OTOSQ8NHW6 89 aa12.47□□□□□ -0.41
CDPF1-203ENST00000404583 THEM6Q8WUY1 208 aa12.47□□□□□ -0.41
CDPF1-203ENST00000404583 GTF3AQ92664 365 aaKnown RBP12.47□□□□□ -0.41
CDPF1-203ENST00000404583 SPTSSAQ969W0 71 aa12.47□□□□□ -0.41
CDPF1-203ENST00000404583 APOBEC3DQ96AK3 386 aaPredicted RBP12.47□□□□□ -0.41
CDPF1-203ENST00000404583 CMBLQ96DG6 245 aa12.47□□□□□ -0.41
CDPF1-203ENST00000404583 ZNF799Q96GE5 643 aa12.47□□□□□ -0.41
CDPF1-203ENST00000404583 C1QTNF5Q9BXJ0 243 aa12.47□□□□□ -0.41
CDPF1-203ENST00000404583 MS4A5Q9H3V2 200 aa12.47□□□□□ -0.41
CDPF1-203ENST00000404583 SLCO1C1Q9NYB5 712 aa12.47□□□□□ -0.41
CDPF1-203ENST00000404583 PTTG3PQ9NZH4 202 aa12.47□□□□□ -0.41
CDPF1-203ENST00000404583 TRIM64A6NGJ6 449 aa12.46□□□□□ -0.41
CDPF1-203ENST00000404583 TRIM64BA6NI03 449 aa12.46□□□□□ -0.41
CDPF1-203ENST00000404583 LCATP04180 440 aa12.46□□□□□ -0.41
CDPF1-203ENST00000404583 LYNP07948 512 aa12.46□□□□□ -0.41
CDPF1-203ENST00000404583 TUBG1P23258 451 aa12.46□□□□□ -0.41
CDPF1-203ENST00000404583 OTX1P32242 354 aaPredicted RBP12.46□□□□□ -0.41
CDPF1-203ENST00000404583 HLXQ14774 488 aaPredicted RBP12.46□□□□□ -0.41
CDPF1-203ENST00000404583 COLCA1Q6ZS62 124 aa12.46□□□□□ -0.41
CDPF1-203ENST00000404583 SLC16A9Q7RTY1 509 aa12.46□□□□□ -0.41
CDPF1-203ENST00000404583 ZNF525Q8N782 197 aa12.46□□□□□ -0.41
CDPF1-203ENST00000404583 OR5L1Q8NGL2 311 aa12.46□□□□□ -0.41
CDPF1-203ENST00000404583 OR8J1Q8NGP2 316 aa12.46□□□□□ -0.41
CDPF1-203ENST00000404583 RNF133Q8WVZ7 376 aa12.46□□□□□ -0.41
CDPF1-203ENST00000404583 COG8Q96MW5 612 aa12.46□□□□□ -0.41
CDPF1-203ENST00000404583 KCNJ15Q99712 375 aa12.46□□□□□ -0.41
CDPF1-203ENST00000404583 TUBG2Q9NRH3 451 aa12.46□□□□□ -0.41
CDPF1-203ENST00000404583 IMPAD1Q9NX62 359 aa12.46□□□□□ -0.41
CDPF1-203ENST00000404583 GPR160Q9UJ42 338 aa12.46□□□□□ -0.41
CDPF1-203ENST00000404583 KLHDC2Q9Y2U9 406 aa12.46□□□□□ -0.41
CDPF1-203ENST00000404583 ACANP16112 2415 aa12.46□□□□□ -0.41
CDPF1-203ENST00000404583 FLNAP21333 2647 aaKnown RBP12.46□□□□□ -0.41
CDPF1-203ENST00000404583 SLC22A31A6NKX4 558 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 H3BSA7 217 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 J3QW42 95 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 ANOS1P23352 680 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 SLC15A1P46059 708 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 SLC6A9P48067 706 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 MMP15P51511 669 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 TNK1Q13470 666 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 GGTLC2Q14390 218 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 MOGQ16653 247 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 DRAM2Q6UX65 266 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 DNM1P46Q6ZS02 220 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 GID4Q8IVV7 300 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 ZNF283Q8N7M2 679 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 ZNF454Q8N9F8 522 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 SNX33Q8WV41 574 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 TRUB1Q8WWH5 349 aaKnown RBP12.45□□□□□ -0.42
CDPF1-203ENST00000404583 NEU4Q8WWR8 484 aaPredicted RBP12.45□□□□□ -0.42
CDPF1-203ENST00000404583 HAVCR1Q96D42 359 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 ZNF582Q96NG8 517 aaPredicted RBP12.45□□□□□ -0.42
CDPF1-203ENST00000404583 TMUB1Q9BVT8 246 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 YIPF3Q9GZM5 350 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 FAM118AQ9NWS6 357 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 DNAJC27Q9NZQ0 273 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 LAMP5Q9UJQ1 280 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 N6AMT1Q9Y5N5 214 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 GMPPBQ9Y5P6 360 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 LOC100130705A0A1B0GUX0 176 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 C5orf63A6NC05 138 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 C17orf100A8MU93 164 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 DLGAP1O14490 977 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 TIMM8AO60220 97 aaPredicted RBP12.45□□□□□ -0.42
CDPF1-203ENST00000404583 ERCC1P07992 297 aaPredicted RBP12.45□□□□□ -0.42
CDPF1-203ENST00000404583 H2BFMP0C1H6 154 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 SLC2A1P11166 492 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 CD99P14209 185 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 ALOX5APP20292 161 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 PEX2P28328 305 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 HSD11B1P28845 292 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 OPRL1P41146 370 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 GRB2P62993 217 aaKnown RBP12.45□□□□□ -0.42
CDPF1-203ENST00000404583 SNAI3Q3KNW1 292 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 CIARTQ8N365 385 aaPredicted RBP12.45□□□□□ -0.42
CDPF1-203ENST00000404583 CNN2Q99439 309 aaKnown RBP12.45□□□□□ -0.42
CDPF1-203ENST00000404583 DCLRE1BQ9H816 532 aa12.45□□□□□ -0.42
CDPF1-203ENST00000404583 ADGRL4Q9HBW9 690 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms