RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 SLITRK2Q9H156 845 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 G6PC2Q9NQR9 355 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 PLEK2Q9NYT0 353 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 MALT1Q9UDY8 824 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 SLC22A13Q9Y226 551 aa18.42■□□□□ 0.54
TPM1-208ENST00000404484 FIGNL2A6NMB9 653 aa18.41■□□□□ 0.54
TPM1-208ENST00000404484 CLEC2LP0C7M8 214 aa18.41■□□□□ 0.54
TPM1-208ENST00000404484 FBXW9Q5XUX1 488 aa18.41■□□□□ 0.54
TPM1-208ENST00000404484 ZNF585AQ6P3V2 769 aa18.41■□□□□ 0.54
TPM1-208ENST00000404484 FAM214BQ7L5A3 538 aa18.41■□□□□ 0.54
TPM1-208ENST00000404484 TSEN15Q8WW01 171 aaKnown RBP18.41■□□□□ 0.54
TPM1-208ENST00000404484 SPTSSAQ969W0 71 aa18.41■□□□□ 0.54
TPM1-208ENST00000404484 SH3GL3Q99963 347 aa18.41■□□□□ 0.54
TPM1-208ENST00000404484 BARHL1Q9BZE3 327 aa18.41■□□□□ 0.54
TPM1-208ENST00000404484 HMG20AQ9NP66 347 aa18.41■□□□□ 0.54
TPM1-208ENST00000404484 NOX4Q9NPH5 578 aa18.41■□□□□ 0.54
TPM1-208ENST00000404484 NUFIP1Q9UHK0 495 aaKnown RBP18.41■□□□□ 0.54
TPM1-208ENST00000404484 TIMM10BQ9Y5J6 103 aa18.41■□□□□ 0.54
TPM1-208ENST00000404484 DVL2O14641 736 aa18.4■□□□□ 0.54
TPM1-208ENST00000404484 PDCD5O14737 125 aa18.4■□□□□ 0.54
TPM1-208ENST00000404484 SGCEO43556 437 aa18.4■□□□□ 0.54
TPM1-208ENST00000404484 HOXD4P09016 255 aaPredicted RBP18.4■□□□□ 0.54
TPM1-208ENST00000404484 MPGP29372 298 aa18.4■□□□□ 0.54
TPM1-208ENST00000404484 ARF1P84077 181 aaKnown RBP18.4■□□□□ 0.54
TPM1-208ENST00000404484 GUSBP1Q15486 140 aa18.4■□□□□ 0.54
TPM1-208ENST00000404484 CCDC92Q53HC0 331 aaPredicted RBP18.4■□□□□ 0.54
TPM1-208ENST00000404484 FAM27D1Q5T7N8 215 aa18.4■□□□□ 0.54
TPM1-208ENST00000404484 GFRALQ6UXV0 394 aa18.4■□□□□ 0.54
TPM1-208ENST00000404484 PPIL3Q9H2H8 161 aaKnown RBP18.4■□□□□ 0.54
TPM1-208ENST00000404484 C12orf49Q9H741 205 aa18.4■□□□□ 0.54
TPM1-208ENST00000404484 HHLA2Q9UM44 414 aa18.4■□□□□ 0.54
TPM1-208ENST00000404484 SLC5A6Q9Y289 635 aa18.4■□□□□ 0.54
TPM1-208ENST00000404484 DIDO1Q9BTC0 2240 aaKnown RBP18.39■□□□□ 0.53
TPM1-208ENST00000404484 CNOT4O95628 575 aaKnown RBP18.39■□□□□ 0.53
TPM1-208ENST00000404484 CD2P06729 351 aa18.39■□□□□ 0.53
TPM1-208ENST00000404484 CX3CR1P49238 355 aa18.39■□□□□ 0.53
TPM1-208ENST00000404484 FAPQ12884 760 aa18.39■□□□□ 0.53
TPM1-208ENST00000404484 DYNC1I2Q13409 638 aaKnown RBP18.39■□□□□ 0.53
TPM1-208ENST00000404484 SLC36A2Q495M3 483 aa18.39■□□□□ 0.53
TPM1-208ENST00000404484 DPPA2Q7Z7J5 298 aa18.39■□□□□ 0.53
TPM1-208ENST00000404484 ELMOD2Q8IZ81 293 aa18.39■□□□□ 0.53
TPM1-208ENST00000404484 ZNF283Q8N7M2 679 aa18.39■□□□□ 0.53
TPM1-208ENST00000404484 OR6K3Q8NGY3 331 aa18.39■□□□□ 0.53
TPM1-208ENST00000404484 WDR12Q9GZL7 423 aaKnown RBP18.39■□□□□ 0.53
TPM1-208ENST00000404484 PBOV1Q9GZY1 135 aa18.39■□□□□ 0.53
TPM1-208ENST00000404484 SMURF1Q9HCE7 757 aa18.39■□□□□ 0.53
TPM1-208ENST00000404484 DHDHQ9UQ10 334 aa18.39■□□□□ 0.53
TPM1-208ENST00000404484 OSGIN2Q9Y236 505 aa18.39■□□□□ 0.53
TPM1-208ENST00000404484 NCOA6Q14686 2063 aaPredicted RBP18.39■□□□□ 0.53
TPM1-208ENST00000404484 TRBV5-7A0A0A0MS05 114 aa18.38■□□□□ 0.53
TPM1-208ENST00000404484 SHISA3A0PJX4 238 aa18.38■□□□□ 0.53
TPM1-208ENST00000404484 DOK2O60496 412 aa18.38■□□□□ 0.53
TPM1-208ENST00000404484 RAB3BP20337 219 aa18.38■□□□□ 0.53
TPM1-208ENST00000404484 PRKXP51817 358 aa18.38■□□□□ 0.53
TPM1-208ENST00000404484 ODF4Q2M2E3 257 aa18.38■□□□□ 0.53
TPM1-208ENST00000404484 ATPIF1Q9UII2 106 aa18.38■□□□□ 0.53
TPM1-208ENST00000404484 MBD3L4A6NDZ8 208 aaPredicted RBP18.38■□□□□ 0.53
TPM1-208ENST00000404484 MBD3L3A6NE82 208 aaPredicted RBP18.38■□□□□ 0.53
TPM1-208ENST00000404484 MBD3L5A6NJ08 208 aaPredicted RBP18.38■□□□□ 0.53
TPM1-208ENST00000404484 CLDN25C9JDP6 229 aa18.38■□□□□ 0.53
TPM1-208ENST00000404484 TPOP07202 933 aa18.38■□□□□ 0.53
TPM1-208ENST00000404484 INHBBP09529 407 aa18.38■□□□□ 0.53
TPM1-208ENST00000404484 ZNF32P17041 273 aa18.38■□□□□ 0.53
TPM1-208ENST00000404484 SRMP19623 302 aa18.38■□□□□ 0.53
TPM1-208ENST00000404484 SOX2P48431 317 aa18.38■□□□□ 0.53
TPM1-208ENST00000404484 BMXP51813 675 aa18.38■□□□□ 0.53
TPM1-208ENST00000404484 ZNF121P58317 390 aaPredicted RBP18.38■□□□□ 0.53
TPM1-208ENST00000404484 ZNF846Q147U1 533 aa18.38■□□□□ 0.53
TPM1-208ENST00000404484 MZT2AQ6P582 158 aa18.38■□□□□ 0.53
TPM1-208ENST00000404484 SKA3Q8IX90 412 aa18.38■□□□□ 0.53
TPM1-208ENST00000404484 RDH10Q8IZV5 341 aa18.38■□□□□ 0.53
TPM1-208ENST00000404484 C9orf106Q8NAJ2 232 aa18.38■□□□□ 0.53
TPM1-208ENST00000404484 MBD3L2Q8NHZ7 208 aaPredicted RBP18.38■□□□□ 0.53
TPM1-208ENST00000404484 ACOT12Q8WYK0 555 aa18.38■□□□□ 0.53
TPM1-208ENST00000404484 TMEM106AQ96A25 262 aa18.38■□□□□ 0.53
TPM1-208ENST00000404484 KCTD12Q96CX2 325 aaKnown RBP18.38■□□□□ 0.53
TPM1-208ENST00000404484 ZFP3Q96NJ6 502 aa18.38■□□□□ 0.53
TPM1-208ENST00000404484 KCNS3Q9BQ31 491 aa18.38■□□□□ 0.53
TPM1-208ENST00000404484 TCF7L1Q9HCS4 588 aa18.38■□□□□ 0.53
TPM1-208ENST00000404484 PLEKHB1Q9UF11 243 aaPredicted RBP18.38■□□□□ 0.53
TPM1-208ENST00000404484 PRSS50Q9UI38 385 aa18.38■□□□□ 0.53
TPM1-208ENST00000404484 GTF3C1Q12789 2109 aa18.37■□□□□ 0.53
TPM1-208ENST00000404484 MYO7BQ6PIF6 2116 aa18.37■□□□□ 0.53
TPM1-208ENST00000404484 SPTAN1Q13813 2472 aaKnown RBP18.37■□□□□ 0.53
TPM1-208ENST00000404484 MED12LQ86YW9 2145 aa18.37■□□□□ 0.53
TPM1-208ENST00000404484 LOC107986453A0A1B0GWG9 222 aa18.37■□□□□ 0.53
TPM1-208ENST00000404484 A0A1W2PPK0 400 aa18.37■□□□□ 0.53
TPM1-208ENST00000404484 TMEM127O75204 238 aa18.37■□□□□ 0.53
TPM1-208ENST00000404484 CRHP06850 196 aa18.37■□□□□ 0.53
TPM1-208ENST00000404484 OTX1P32242 354 aaPredicted RBP18.37■□□□□ 0.53
TPM1-208ENST00000404484 C1orf185Q5T7R7 199 aa18.37■□□□□ 0.53
TPM1-208ENST00000404484 TFAP2EQ6VUC0 442 aa18.37■□□□□ 0.53
TPM1-208ENST00000404484 LUZP2Q86TE4 346 aa18.37■□□□□ 0.53
TPM1-208ENST00000404484 GCNT2Q8N0V5 402 aa18.37■□□□□ 0.53
TPM1-208ENST00000404484 OR1F12Q8NHA8 337 aa18.37■□□□□ 0.53
TPM1-208ENST00000404484 FAM57AQ8TBR7 257 aa18.37■□□□□ 0.53
TPM1-208ENST00000404484 OR2H1Q9GZK4 316 aa18.37■□□□□ 0.53
TPM1-208ENST00000404484 SP140LQ9H930 580 aa18.37■□□□□ 0.53
TPM1-208ENST00000404484 BRD7Q9NPI1 651 aa18.37■□□□□ 0.53
TPM1-208ENST00000404484 AKIP1Q9NQ31 210 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms