RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 CHRDQ9H2X0 955 aa9.58□□□□□ -0.88
CLIP4-204ENST00000404424 TMEM185BQ9H7F4 350 aa9.58□□□□□ -0.88
CLIP4-204ENST00000404424 CHST11Q9NPF2 352 aa9.58□□□□□ -0.88
CLIP4-204ENST00000404424 FANCFQ9NPI8 374 aa9.58□□□□□ -0.88
CLIP4-204ENST00000404424 FAM206AQ9NX38 181 aa9.58□□□□□ -0.88
CLIP4-204ENST00000404424 MYEF2Q9P2K5 600 aaKnown RBP9.58□□□□□ -0.88
CLIP4-204ENST00000404424 FBLN5Q9UBX5 448 aa9.58□□□□□ -0.88
CLIP4-204ENST00000404424 PISDQ9UG56 409 aa9.58□□□□□ -0.88
CLIP4-204ENST00000404424 FREM3P0C091 2139 aa9.58□□□□□ -0.88
CLIP4-204ENST00000404424 C9orf170A2RU37 121 aa9.58□□□□□ -0.88
CLIP4-204ENST00000404424 METTL12A8MUP2 240 aa9.58□□□□□ -0.88
CLIP4-204ENST00000404424 IL11P20809 199 aa9.58□□□□□ -0.88
CLIP4-204ENST00000404424 RNF4P78317 190 aa9.58□□□□□ -0.88
CLIP4-204ENST00000404424 HSF1Q00613 529 aa9.58□□□□□ -0.88
CLIP4-204ENST00000404424 OR7A5Q15622 319 aa9.58□□□□□ -0.88
CLIP4-204ENST00000404424 PRAMEF17Q5VTA0 474 aa9.58□□□□□ -0.88
CLIP4-204ENST00000404424 TMEM17Q86X19 198 aa9.58□□□□□ -0.88
CLIP4-204ENST00000404424 RELL2Q8NC24 303 aaPredicted RBP9.58□□□□□ -0.88
CLIP4-204ENST00000404424 OR1M1Q8NGA1 313 aa9.58□□□□□ -0.88
CLIP4-204ENST00000404424 OR10H5Q8NGA6 315 aa9.58□□□□□ -0.88
CLIP4-204ENST00000404424 OR5D14Q8NGL3 314 aa9.58□□□□□ -0.88
CLIP4-204ENST00000404424 PPP1R1CQ8WVI7 109 aa9.58□□□□□ -0.88
CLIP4-204ENST00000404424 VRK1Q99986 396 aaPredicted RBP9.58□□□□□ -0.88
CLIP4-204ENST00000404424 CENPMQ9NSP4 180 aa9.58□□□□□ -0.88
CLIP4-204ENST00000404424 SEMA5BQ9P283 1151 aa9.58□□□□□ -0.88
CLIP4-204ENST00000404424 SLC5A6Q9Y289 635 aa9.58□□□□□ -0.88
CLIP4-204ENST00000404424 IGHV1OR21-1A0A087WYE8 117 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 C2CD4DB7Z1M9 353 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 SYT7O43581 403 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 STK17BO94768 372 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 ERCC1P07992 297 aaPredicted RBP9.57□□□□□ -0.88
CLIP4-204ENST00000404424 GNALP38405 381 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 IL13RA1P78552 427 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 QRFPP83859 136 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 POU3F1Q03052 451 aaPredicted RBP9.57□□□□□ -0.88
CLIP4-204ENST00000404424 TLE3Q04726 772 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 PPP1R1AQ13522 171 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 NKPD1Q17RQ9 610 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 C17orf107Q6ZR85 190 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 CCDC36Q8IYA8 594 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 PRSS58Q8IYP2 241 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 CHST4Q8NCG5 386 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 THAP6Q8TBB0 222 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 NKD1Q969G9 470 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 SLAMF6Q96DU3 332 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 ARL5BQ96KC2 179 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 CST11Q9H112 138 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 BARX1Q9HBU1 254 aaPredicted RBP9.57□□□□□ -0.88
CLIP4-204ENST00000404424 REV3LO60673 3130 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 PCNX3Q9H6A9 2034 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 PCDH15Q96QU1 1955 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 XIRP2A4UGR9 3374 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 IGKV1D-43A0A0B4J1Z2 117 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 RNF222A6NCQ9 220 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 WIPF3A6NGB9 483 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 LMX1BO60663 402 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 TTRP02766 147 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 CSN2P05814 226 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 CHRM2P08172 466 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 RAB3AP20336 220 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 DLSTP36957 453 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 PRKXP51817 358 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 LUMP51884 338 aaPredicted RBP9.57□□□□□ -0.88
CLIP4-204ENST00000404424 OR1D5P58170 312 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 UNC119Q13432 240 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 SQSTM1Q13501 440 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 PAN3Q58A45 887 aaKnown RBP9.57□□□□□ -0.88
CLIP4-204ENST00000404424 OR52N4Q8NGI2 321 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 ZNF471Q9BX82 626 aaPredicted RBP9.57□□□□□ -0.88
CLIP4-204ENST00000404424 TPSD1Q9BZJ3 242 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 PBOV1Q9GZY1 135 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 MOB1AQ9H8S9 216 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 IFT46Q9NQC8 304 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 TAS2R3Q9NYW6 316 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 SUSD2Q9UGT4 822 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 B3GALT5Q9Y2C3 310 aa9.57□□□□□ -0.88
CLIP4-204ENST00000404424 TOR1AO14656 332 aa9.56□□□□□ -0.88
CLIP4-204ENST00000404424 DUX1O43812 170 aa9.56□□□□□ -0.88
CLIP4-204ENST00000404424 DUS4LO95620 317 aaKnown RBP9.56□□□□□ -0.88
CLIP4-204ENST00000404424 APOC3P02656 99 aa9.56□□□□□ -0.88
CLIP4-204ENST00000404424 IFNA6P05013 189 aa9.56□□□□□ -0.88
CLIP4-204ENST00000404424 VSIG8P0DPA2 414 aa9.56□□□□□ -0.88
CLIP4-204ENST00000404424 FOLR1P15328 257 aa9.56□□□□□ -0.88
CLIP4-204ENST00000404424 CNR1P21554 472 aa9.56□□□□□ -0.88
CLIP4-204ENST00000404424 TAS2R31P59538 309 aa9.56□□□□□ -0.88
CLIP4-204ENST00000404424 HYAL4Q2M3T9 481 aa9.56□□□□□ -0.88
CLIP4-204ENST00000404424 ZNF529Q6P280 563 aa9.56□□□□□ -0.88
CLIP4-204ENST00000404424 LANCL3Q6ZV70 420 aa9.56□□□□□ -0.88
CLIP4-204ENST00000404424 KMT5CQ86Y97 462 aa9.56□□□□□ -0.88
CLIP4-204ENST00000404424 INO80EQ8NBZ0 244 aaPredicted RBP9.56□□□□□ -0.88
CLIP4-204ENST00000404424 C11orf40Q8WZ69 217 aa9.56□□□□□ -0.88
CLIP4-204ENST00000404424 C5orf34Q96MH7 638 aa9.56□□□□□ -0.88
CLIP4-204ENST00000404424 MS4A7Q9GZW8 240 aaPredicted RBP9.56□□□□□ -0.88
CLIP4-204ENST00000404424 WDR13Q9H1Z4 485 aa9.56□□□□□ -0.88
CLIP4-204ENST00000404424 GAREM1Q9H706 876 aa9.56□□□□□ -0.88
CLIP4-204ENST00000404424 ALKBH4Q9NXW9 302 aa9.56□□□□□ -0.88
CLIP4-204ENST00000404424 SEC16AO15027 2179 aa9.56□□□□□ -0.88
CLIP4-204ENST00000404424 RP1P56715 2156 aa9.56□□□□□ -0.88
CLIP4-204ENST00000404424 LOC101059948A0A1B0GTJ6 334 aa9.56□□□□□ -0.88
CLIP4-204ENST00000404424 A0A1W2PNV4 684 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms