RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 ZMAT3Q9HA38 289 aaKnown RBP17.72■□□□□ 0.43
CCDC47-202ENST00000403162 PCDHB16Q9NRJ7 776 aa17.72■□□□□ 0.43
CCDC47-202ENST00000403162 RHBDD3Q9Y3P4 386 aa17.72■□□□□ 0.43
CCDC47-202ENST00000403162 LOC107986453A0A1B0GWG9 222 aa17.72■□□□□ 0.43
CCDC47-202ENST00000403162 CRABP1P29762 137 aa17.72■□□□□ 0.43
CCDC47-202ENST00000403162 PPIAP62937 165 aaKnown RBP17.72■□□□□ 0.43
CCDC47-202ENST00000403162 DEFA5Q01523 94 aa17.72■□□□□ 0.43
CCDC47-202ENST00000403162 GLO1Q04760 184 aa17.72■□□□□ 0.43
CCDC47-202ENST00000403162 SPOCK1Q08629 439 aa17.72■□□□□ 0.43
CCDC47-202ENST00000403162 HYAL4Q2M3T9 481 aa17.72■□□□□ 0.43
CCDC47-202ENST00000403162 PAN3Q58A45 887 aaKnown RBP17.72■□□□□ 0.43
CCDC47-202ENST00000403162 CORO6Q6QEF8 472 aa17.72■□□□□ 0.43
CCDC47-202ENST00000403162 MARCH3Q86UD3 253 aa17.72■□□□□ 0.43
CCDC47-202ENST00000403162 FOXRED1Q96CU9 486 aaPredicted RBP17.72■□□□□ 0.43
CCDC47-202ENST00000403162 NPAS1Q99742 590 aa17.72■□□□□ 0.43
CCDC47-202ENST00000403162 PIGMQ9H3S5 423 aa17.72■□□□□ 0.43
CCDC47-202ENST00000403162 MMACHCQ9Y4U1 282 aa17.72■□□□□ 0.43
CCDC47-202ENST00000403162 ALG1L2C9J202 215 aa17.71■□□□□ 0.43
CCDC47-202ENST00000403162 CCSO14618 274 aa17.71■□□□□ 0.43
CCDC47-202ENST00000403162 IL12BP29460 328 aa17.71■□□□□ 0.43
CCDC47-202ENST00000403162 CAPZBP47756 277 aa17.71■□□□□ 0.43
CCDC47-202ENST00000403162 FASLGP48023 281 aa17.71■□□□□ 0.43
CCDC47-202ENST00000403162 SNTB1Q13884 538 aaKnown RBP17.71■□□□□ 0.43
CCDC47-202ENST00000403162 C14orf28Q4W4Y0 310 aa17.71■□□□□ 0.43
CCDC47-202ENST00000403162 RNASE10Q5GAN6 216 aaKnown RBP17.71■□□□□ 0.43
CCDC47-202ENST00000403162 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.71■□□□□ 0.43
CCDC47-202ENST00000403162 OR10K2Q6IF99 312 aa17.71■□□□□ 0.43
CCDC47-202ENST00000403162 MITD1Q8WV92 249 aa17.71■□□□□ 0.43
CCDC47-202ENST00000403162 NKX6-2Q9C056 277 aaPredicted RBP17.71■□□□□ 0.43
CCDC47-202ENST00000403162 G6PC2Q9NQR9 355 aa17.71■□□□□ 0.43
CCDC47-202ENST00000403162 GDF2Q9UK05 429 aaPredicted RBP17.71■□□□□ 0.43
CCDC47-202ENST00000403162 EMC9Q9Y3B6 208 aa17.71■□□□□ 0.43
CCDC47-202ENST00000403162 CPED1A4D0V7 1026 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 WISP1O95388 367 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 NUDT14O95848 222 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 POLR2HP52434 150 aaKnown RBP17.7■□□□□ 0.42
CCDC47-202ENST00000403162 ATP1B3P54709 279 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 DCAF7P61962 342 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 ZNF260Q3ZCT1 412 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 LRRC37A5PQ49AS3 106 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 PABPC1L2AQ5JQF8 200 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 C3orf33Q6P1S2 294 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 FAHD2BQ6P2I3 314 aaPredicted RBP17.7■□□□□ 0.42
CCDC47-202ENST00000403162 C17orf82Q86X59 251 aaPredicted RBP17.7■□□□□ 0.42
CCDC47-202ENST00000403162 OR4S1Q8NGB4 309 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 ZNF721Q8TF20 911 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 FAHD2AQ96GK7 314 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 FAM117AQ9C073 453 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 RAB22AQ9UL26 194 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 COL5A1P20908 1838 aaPredicted RBP17.7■□□□□ 0.42
CCDC47-202ENST00000403162 TMED7-TICAM2A0A0A6YYA0 188 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 FITM1A5D6W6 292 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 METTL21EPA6NDL7 271 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 FAM74A7A6NL05 159 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 C17orf51A8MQB3 221 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 TMEM150CB9EJG8 249 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 SULT2B1O00204 365 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 PLPP3O14495 311 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 CER1O95813 267 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 DDAH2O95865 285 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 GIMD1P0DJR0 217 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 CASRP41180 1078 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 CXADRP78310 365 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 PPP1R1AQ13522 171 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 FAM74A3Q4VXF1 159 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 PDSS1Q5T2R2 415 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 PRAMEF17Q5VTA0 474 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 ZNF704Q6ZNC4 412 aaPredicted RBP17.7■□□□□ 0.42
CCDC47-202ENST00000403162 ACBD4Q8NC06 268 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 TMEM185AQ8NFB2 350 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 OR4D6Q8NGJ1 314 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 SAP25Q8TEE9 199 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 MRGPRFQ96AM1 343 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 SEC22AQ96IW7 307 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 GAL3ST4Q96RP7 486 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 CST11Q9H112 138 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 OR52A1Q9UKL2 312 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 TMED7Q9Y3B3 224 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 ADAMTS9Q9P2N4 1935 aa17.7■□□□□ 0.42
CCDC47-202ENST00000403162 C9orf170A2RU37 121 aa17.69■□□□□ 0.42
CCDC47-202ENST00000403162 RAB19A4D1S5 217 aa17.69■□□□□ 0.42
CCDC47-202ENST00000403162 A8MVM7 634 aa17.69■□□□□ 0.42
CCDC47-202ENST00000403162 SMAD9O15198 467 aaKnown RBP17.69■□□□□ 0.42
CCDC47-202ENST00000403162 SIGLEC5O15389 551 aa17.69■□□□□ 0.42
CCDC47-202ENST00000403162 YKT6O15498 198 aa17.69■□□□□ 0.42
CCDC47-202ENST00000403162 TSPAN2O60636 221 aa17.69■□□□□ 0.42
CCDC47-202ENST00000403162 PLATP00750 562 aa17.69■□□□□ 0.42
CCDC47-202ENST00000403162 NKPD1Q17RQ9 610 aa17.69■□□□□ 0.42
CCDC47-202ENST00000403162 CDNFQ49AH0 187 aa17.69■□□□□ 0.42
CCDC47-202ENST00000403162 C1orf140Q5VVS0 124 aa17.69■□□□□ 0.42
CCDC47-202ENST00000403162 FJX1Q86VR8 437 aa17.69■□□□□ 0.42
CCDC47-202ENST00000403162 PHB2Q99623 299 aa17.69■□□□□ 0.42
CCDC47-202ENST00000403162 MYEF2Q9P2K5 600 aaKnown RBP17.69■□□□□ 0.42
CCDC47-202ENST00000403162 COA3Q9Y2R0 106 aaPredicted RBP17.69■□□□□ 0.42
CCDC47-202ENST00000403162 IGKV3D-11A0A0A0MRZ8 115 aa17.69■□□□□ 0.42
CCDC47-202ENST00000403162 WIPF3A6NGB9 483 aa17.69■□□□□ 0.42
CCDC47-202ENST00000403162 RHPN2P1A8MT19 583 aa17.69■□□□□ 0.42
CCDC47-202ENST00000403162 RAB27BO00194 218 aa17.69■□□□□ 0.42
CCDC47-202ENST00000403162 EIF1AYO14602 144 aaKnown RBP17.69■□□□□ 0.42
CCDC47-202ENST00000403162 CSN2P05814 226 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms