RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 CXXC5Q7LFL8 322 aaKnown RBP16.39■□□□□ 0.21
RTN4-207ENST00000402434 DPY19L4Q7Z388 723 aa16.39■□□□□ 0.21
RTN4-207ENST00000402434 UBASH3BQ8TF42 649 aa16.39■□□□□ 0.21
RTN4-207ENST00000402434 HAVCR1Q96D42 359 aa16.39■□□□□ 0.21
RTN4-207ENST00000402434 PRRG3Q9BZD7 231 aa16.39■□□□□ 0.21
RTN4-207ENST00000402434 GSX1Q9H4S2 264 aaPredicted RBP16.39■□□□□ 0.21
RTN4-207ENST00000402434 S100A14Q9HCY8 104 aa16.39■□□□□ 0.21
RTN4-207ENST00000402434 ABCA1O95477 2261 aa16.39■□□□□ 0.21
RTN4-207ENST00000402434 HPXP02790 462 aa16.38■□□□□ 0.21
RTN4-207ENST00000402434 RAC2P15153 192 aa16.38■□□□□ 0.21
RTN4-207ENST00000402434 GIFP27352 417 aa16.38■□□□□ 0.21
RTN4-207ENST00000402434 TPTEP56180 551 aa16.38■□□□□ 0.21
RTN4-207ENST00000402434 PCGF3Q3KNV8 242 aa16.38■□□□□ 0.21
RTN4-207ENST00000402434 KLHL12Q53G59 568 aa16.38■□□□□ 0.21
RTN4-207ENST00000402434 RHOUQ7L0Q8 258 aa16.38■□□□□ 0.21
RTN4-207ENST00000402434 ERI1Q8IV48 349 aaKnown RBP16.38■□□□□ 0.21
RTN4-207ENST00000402434 BBS1Q8NFJ9 593 aa16.38■□□□□ 0.21
RTN4-207ENST00000402434 SPTSSAQ969W0 71 aa16.38■□□□□ 0.21
RTN4-207ENST00000402434 CMBLQ96DG6 245 aa16.38■□□□□ 0.21
RTN4-207ENST00000402434 SLAMF6Q96DU3 332 aa16.38■□□□□ 0.21
RTN4-207ENST00000402434 ZMYND19Q96E35 227 aaPredicted RBP16.38■□□□□ 0.21
RTN4-207ENST00000402434 GABARAPL3Q9BY60 117 aa16.38■□□□□ 0.21
RTN4-207ENST00000402434 CYSLTR2Q9NS75 346 aa16.38■□□□□ 0.21
RTN4-207ENST00000402434 CR1P17927 2039 aa16.38■□□□□ 0.21
RTN4-207ENST00000402434 PLSCR5A0PG75 271 aa16.37■□□□□ 0.21
RTN4-207ENST00000402434 PRKYO43930 277 aa16.37■□□□□ 0.21
RTN4-207ENST00000402434 ALPLP05186 524 aa16.37■□□□□ 0.21
RTN4-207ENST00000402434 ADH4P08319 380 aa16.37■□□□□ 0.21
RTN4-207ENST00000402434 POLR2IP36954 125 aaKnown RBP16.37■□□□□ 0.21
RTN4-207ENST00000402434 ZNF81P51508 661 aa16.37■□□□□ 0.21
RTN4-207ENST00000402434 MRPS11P82912 194 aaKnown RBP16.37■□□□□ 0.21
RTN4-207ENST00000402434 SHFQ7M4L6 423 aa16.37■□□□□ 0.21
RTN4-207ENST00000402434 NAA40Q86UY6 237 aa16.37■□□□□ 0.21
RTN4-207ENST00000402434 OR6N2Q8NGY6 317 aa16.37■□□□□ 0.21
RTN4-207ENST00000402434 GTF3AQ92664 365 aaKnown RBP16.37■□□□□ 0.21
RTN4-207ENST00000402434 PURGQ9UJV8 347 aaKnown RBP16.37■□□□□ 0.21
RTN4-207ENST00000402434 M0R135 149 aa16.36■□□□□ 0.21
RTN4-207ENST00000402434 NCR1O76036 304 aa16.36■□□□□ 0.21
RTN4-207ENST00000402434 NR4A2P43354 598 aa16.36■□□□□ 0.21
RTN4-207ENST00000402434 MAGEB1P43366 347 aa16.36■□□□□ 0.21
RTN4-207ENST00000402434 LOXL1Q08397 574 aaPredicted RBP16.36■□□□□ 0.21
RTN4-207ENST00000402434 MAPK1IP1LQ8NDC0 245 aa16.36■□□□□ 0.21
RTN4-207ENST00000402434 ZNF540Q8NDQ6 660 aa16.36■□□□□ 0.21
RTN4-207ENST00000402434 RNF133Q8WVZ7 376 aa16.36■□□□□ 0.21
RTN4-207ENST00000402434 ZNF799Q96GE5 643 aa16.36■□□□□ 0.21
RTN4-207ENST00000402434 TEAD3Q99594 435 aa16.36■□□□□ 0.21
RTN4-207ENST00000402434 PIMREGQ9BSJ6 248 aa16.36■□□□□ 0.21
RTN4-207ENST00000402434 ABHD6Q9BV23 337 aa16.36■□□□□ 0.21
RTN4-207ENST00000402434 USE1Q9NZ43 259 aa16.36■□□□□ 0.21
RTN4-207ENST00000402434 SETD2Q9BYW2 2564 aaPredicted RBP16.36■□□□□ 0.21
RTN4-207ENST00000402434 ZSCAN5BA6NJL1 495 aa16.35■□□□□ 0.21
RTN4-207ENST00000402434 ZNF878C9JN71 531 aa16.35■□□□□ 0.21
RTN4-207ENST00000402434 TLX2O43763 284 aaPredicted RBP16.35■□□□□ 0.21
RTN4-207ENST00000402434 LY6G6DO95868 133 aa16.35■□□□□ 0.21
RTN4-207ENST00000402434 CCL8P80075 99 aa16.35■□□□□ 0.21
RTN4-207ENST00000402434 RIN1Q13671 783 aa16.35■□□□□ 0.21
RTN4-207ENST00000402434 APOFQ13790 326 aa16.35■□□□□ 0.21
RTN4-207ENST00000402434 EIF2B1Q14232 305 aaKnown RBP16.35■□□□□ 0.21
RTN4-207ENST00000402434 HLXQ14774 488 aaPredicted RBP16.35■□□□□ 0.21
RTN4-207ENST00000402434 ZMAT1Q5H9K5 638 aa16.35■□□□□ 0.21
RTN4-207ENST00000402434 FAM209AQ5JX71 171 aa16.35■□□□□ 0.21
RTN4-207ENST00000402434 DRAM2Q6UX65 266 aa16.35■□□□□ 0.21
RTN4-207ENST00000402434 CLEC9AQ6UXN8 241 aa16.35■□□□□ 0.21
RTN4-207ENST00000402434 OTOSQ8NHW6 89 aa16.35■□□□□ 0.21
RTN4-207ENST00000402434 RDH5Q92781 318 aa16.35■□□□□ 0.21
RTN4-207ENST00000402434 KCNJ15Q99712 375 aa16.35■□□□□ 0.21
RTN4-207ENST00000402434 COPS4Q9BT78 406 aa16.35■□□□□ 0.21
RTN4-207ENST00000402434 CENPMQ9NSP4 180 aa16.35■□□□□ 0.21
RTN4-207ENST00000402434 ZDHHC8Q9ULC8 765 aa16.35■□□□□ 0.21
RTN4-207ENST00000402434 CCDC182A6NF36 153 aa16.35■□□□□ 0.21
RTN4-207ENST00000402434 EI24O14681 340 aa16.35■□□□□ 0.21
RTN4-207ENST00000402434 TIMM8AO60220 97 aaPredicted RBP16.35■□□□□ 0.21
RTN4-207ENST00000402434 SELENOFO60613 162 aa16.35■□□□□ 0.21
RTN4-207ENST00000402434 IGHV1-46P01743 117 aa16.35■□□□□ 0.21
RTN4-207ENST00000402434 LCATP04180 440 aa16.35■□□□□ 0.21
RTN4-207ENST00000402434 HEXAP06865 529 aa16.35■□□□□ 0.21
RTN4-207ENST00000402434 COL8A2P25067 703 aa16.35■□□□□ 0.21
RTN4-207ENST00000402434 SLC15A1P46059 708 aa16.35■□□□□ 0.21
RTN4-207ENST00000402434 ALDH3A2P51648 485 aa16.35■□□□□ 0.21
RTN4-207ENST00000402434 CARTPTQ16568 116 aa16.35■□□□□ 0.21
RTN4-207ENST00000402434 AADACL4Q5VUY2 407 aa16.35■□□□□ 0.21
RTN4-207ENST00000402434 PQLC1Q8N2U9 271 aa16.35■□□□□ 0.21
RTN4-207ENST00000402434 TCEANCQ8N8B7 351 aa16.35■□□□□ 0.21
RTN4-207ENST00000402434 ZNF454Q8N9F8 522 aa16.35■□□□□ 0.21
RTN4-207ENST00000402434 TMEM163Q8TC26 289 aa16.35■□□□□ 0.21
RTN4-207ENST00000402434 DIRC2Q96SL1 478 aa16.35■□□□□ 0.21
RTN4-207ENST00000402434 MSL2Q9HCI7 577 aa16.35■□□□□ 0.21
RTN4-207ENST00000402434 PTTG3PQ9NZH4 202 aa16.35■□□□□ 0.21
RTN4-207ENST00000402434 YLPM1P49750 1951 aaKnown RBP16.34■□□□□ 0.21
RTN4-207ENST00000402434 LYNX1G3V0Z9 82 aa16.34■□□□□ 0.21
RTN4-207ENST00000402434 M0R129 80 aa16.34■□□□□ 0.21
RTN4-207ENST00000402434 LYNX1P0DP58 116 aa16.34■□□□□ 0.21
RTN4-207ENST00000402434 ACHEP22303 614 aa16.34■□□□□ 0.21
RTN4-207ENST00000402434 USF1P22415 310 aaPredicted RBP16.34■□□□□ 0.21
RTN4-207ENST00000402434 RPS7P62081 194 aaKnown RBP16.34■□□□□ 0.21
RTN4-207ENST00000402434 GRB2P62993 217 aaKnown RBP16.34■□□□□ 0.21
RTN4-207ENST00000402434 KRTAP1-1Q07627 177 aa16.34■□□□□ 0.21
RTN4-207ENST00000402434 CDK5R2Q13319 367 aa16.34■□□□□ 0.21
RTN4-207ENST00000402434 NXNL2Q5VZ03 156 aa16.34■□□□□ 0.21
RTN4-207ENST00000402434 CBR4Q8N4T8 237 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms