RNA–Protein interactions for RNA: ENST00000401468.7

VPS53-203, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-203ENST00000401468 CNIH3Q8TBE1 160 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 MUCL1Q96DR8 90 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 ZMYND19Q96E35 227 aaPredicted RBP7.95□□□□□ -1.14
VPS53-203ENST00000401468 MAP6Q96JE9 813 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 C18orf12Q96KH6 178 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 FOXN4Q96NZ1 517 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 SIGLEC11Q96RL6 698 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 CNN2Q99439 309 aaKnown RBP7.95□□□□□ -1.14
VPS53-203ENST00000401468 ZNF649Q9BS31 505 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 OR2H1Q9GZK4 316 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 WNT5BQ9H1J7 359 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 BEX4Q9NWD9 120 aaPredicted RBP7.95□□□□□ -1.14
VPS53-203ENST00000401468 H2AFY2Q9P0M6 372 aaPredicted RBP7.95□□□□□ -1.14
VPS53-203ENST00000401468 ASH2LQ9UBL3 628 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 AASSQ9UDR5 926 aa7.95□□□□□ -1.14
VPS53-203ENST00000401468 RPL36Q9Y3U8 105 aaKnown RBP7.95□□□□□ -1.14
VPS53-203ENST00000401468 IGHV1-18A0A0C4DH31 117 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 SELENOFO60613 162 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 CCDC159P0C7I6 412 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 OR2T7P0C7T2 308 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 CSNK2BP67870 215 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 ROM1Q03395 351 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 BSPH1Q075Z2 132 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 SCRN3Q0VDG4 424 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 RAB40BQ12829 278 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 RAB35Q15286 201 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 SMN1Q16637 294 aaKnown RBP7.94□□□□□ -1.14
VPS53-203ENST00000401468 RSPO1Q2MKA7 263 aaPredicted RBP7.94□□□□□ -1.14
VPS53-203ENST00000401468 KLHL12Q53G59 568 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 BEX5Q5H9J7 111 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 PABPC1L2AQ5JQF8 200 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 C6orf141Q5SZD1 244 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 ZNF684Q5T5D7 378 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 TMEM53Q6P2H8 277 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 DEGS2Q6QHC5 323 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 B3GLCTQ6Y288 498 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 CFAP77Q6ZQR2 320 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 DPY19L4Q7Z388 723 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 MYPOPQ86VE0 399 aaPredicted RBP7.94□□□□□ -1.14
VPS53-203ENST00000401468 ERI1Q8IV48 349 aaKnown RBP7.94□□□□□ -1.14
VPS53-203ENST00000401468 CPEB3Q8NE35 698 aaKnown RBP7.94□□□□□ -1.14
VPS53-203ENST00000401468 OR10H5Q8NGA6 315 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 OR2T27Q8NH04 317 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 OR52N5Q8NH56 324 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 RNF133Q8WVZ7 376 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 IPCEF1Q8WWN9 437 aaPredicted RBP7.94□□□□□ -1.14
VPS53-203ENST00000401468 OTULINQ96BN8 352 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 LGALS12Q96DT0 336 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 POM121L2Q96KW2 1035 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 COQ7Q99807 217 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 TMEM204Q9BSN7 226 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 HDHD2Q9H0R4 259 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 KCNN2Q9H2S1 579 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 C1orf198Q9H425 327 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 Q9H521 79 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 RERGLQ9H628 205 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 FGF20Q9NP95 211 aaPredicted RBP7.94□□□□□ -1.14
VPS53-203ENST00000401468 UBAP1Q9NZ09 502 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 CNOT2Q9NZN8 540 aaKnown RBP7.94□□□□□ -1.14
VPS53-203ENST00000401468 EDARQ9UNE0 448 aa7.94□□□□□ -1.14
VPS53-203ENST00000401468 DPRXA6NFQ7 191 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 INAFM1C9JVW0 142 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 SLC1A7O00341 560 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 HS3ST1O14792 307 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 PHYHO14832 338 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 RER1O15258 196 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 SGCEO43556 437 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 PTHP01270 115 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 HLA-DQA2P01906 255 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 SOD3P08294 240 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 CECR9P0C854 216 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 PATE4P0C8F1 98 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 CD79AP11912 226 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 ZNF35P13682 527 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 ZNF823P16415 610 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 OPRL1P41146 370 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 RPS27P42677 84 aaKnown RBP7.93□□□□□ -1.14
VPS53-203ENST00000401468 ZNF83P51522 516 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 NUDT6P53370 316 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 ATP5J2P56134 94 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 RPS7P62081 194 aaKnown RBP7.93□□□□□ -1.14
VPS53-203ENST00000401468 TUBA1BP68363 451 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 TUBA4AP68366 448 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 EGR3Q06889 387 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 ECH1Q13011 328 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 KLHL22Q53GT1 634 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 ELFN2Q5R3F8 820 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 NCMAPQ5T1S8 102 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 RNLSQ5VYX0 342 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 OTPQ5XKR4 325 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 TUBA1AQ71U36 451 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 DCXRQ7Z4W1 244 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 IL17RDQ8NFM7 739 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 RNFT2Q96EX2 444 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 AMELYQ99218 206 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 ABHD6Q9BV23 337 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 CCNB1IP1Q9NPC3 277 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 NGBQ9NPG2 151 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 INPP5EQ9NRR6 644 aa7.93□□□□□ -1.14
VPS53-203ENST00000401468 PSORS1C1Q9UIG5 152 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms