RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 TMEM11P17152 192 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 REEP5Q00765 189 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 PRAMEF5Q5TYX0 476 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 PRAMEF6Q5VXH4 476 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 PRSS42Q7Z5A4 293 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 CLRN3Q8NCR9 226 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 CIB3Q96Q77 187 aaPredicted RBP8.09□□□□□ -1.11
PTPRM-202ENST00000400053 SOX7Q9BT81 388 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 RTL8AQ9BWD3 113 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 SUCNR1Q9BXA5 334 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 WWTR1Q9GZV5 400 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 SLC25A32Q9H2D1 315 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 SIRT5Q9NXA8 310 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 TRAV20A0A0B4J274 112 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 CD3DP04234 171 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 GJA4P35212 333 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 NKX2-1P43699 371 aaPredicted RBP8.09□□□□□ -1.11
PTPRM-202ENST00000400053 MRPL19P49406 292 aaKnown RBP8.09□□□□□ -1.11
PTPRM-202ENST00000400053 SNRPNP63162 240 aaKnown RBP8.09□□□□□ -1.11
PTPRM-202ENST00000400053 CSNK1G2P78368 415 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 ZP2Q05996 745 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 BAMBIQ13145 260 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 ZNF239Q16600 458 aaKnown RBP8.09□□□□□ -1.11
PTPRM-202ENST00000400053 DUSP5Q16690 384 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 ARHGAP11BQ3KRB8 267 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 GLIPR1L1Q6UWM5 242 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 GABRG1Q8N1C3 465 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 OR5M8Q8NGP6 311 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 OR2G3Q8NGZ4 309 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 NMES1Q9C002 83 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 NKX2-4Q9H2Z4 354 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 UMAD1C9J7I0 102 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 H3BNC9 293 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 MMP7P09237 267 aaPredicted RBP8.09□□□□□ -1.11
PTPRM-202ENST00000400053 NME1P15531 152 aaKnown RBP8.09□□□□□ -1.11
PTPRM-202ENST00000400053 TCN2P20062 427 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 PSMB6P28072 239 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 CARD18P57730 90 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 DCDP81605 110 aaKnown RBP8.09□□□□□ -1.11
PTPRM-202ENST00000400053 TEKQ02763 1124 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 IHHQ14623 411 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 FAM78AQ5JUQ0 283 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 RPL7L1Q6DKI1 246 aaKnown RBP8.09□□□□□ -1.11
PTPRM-202ENST00000400053 VHLLQ6RSH7 139 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 SLC16A12Q6ZSM3 486 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 ISG20L2Q9H9L3 353 aaKnown RBP8.09□□□□□ -1.11
PTPRM-202ENST00000400053 SLC6A13Q9NSD5 602 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 MCM3APO60318 1980 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 KIF13BQ9NQT8 1826 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 PMS2P1A4D2B8 440 aa8.09□□□□□ -1.12
PTPRM-202ENST00000400053 SIGLEC6O43699 453 aa8.09□□□□□ -1.12
PTPRM-202ENST00000400053 POU3F3P20264 500 aaPredicted RBP8.09□□□□□ -1.12
PTPRM-202ENST00000400053 ALOX5APP20292 161 aa8.09□□□□□ -1.12
PTPRM-202ENST00000400053 ABCD3P28288 659 aa8.09□□□□□ -1.12
PTPRM-202ENST00000400053 PTTG1IPP53801 180 aa8.09□□□□□ -1.12
PTPRM-202ENST00000400053 H3F3AP84243 136 aa8.09□□□□□ -1.12
PTPRM-202ENST00000400053 SLC25A35Q3KQZ1 300 aa8.09□□□□□ -1.12
PTPRM-202ENST00000400053 TMEM52BQ4KMG9 183 aa8.09□□□□□ -1.12
PTPRM-202ENST00000400053 PYCR3Q53H96 274 aa8.09□□□□□ -1.12
PTPRM-202ENST00000400053 C9orf135Q5VTT2 229 aa8.09□□□□□ -1.12
PTPRM-202ENST00000400053 THNSL2Q86YJ6 484 aa8.09□□□□□ -1.12
PTPRM-202ENST00000400053 ZNF683Q8IZ20 524 aa8.09□□□□□ -1.12
PTPRM-202ENST00000400053 DPF1Q92782 380 aa8.09□□□□□ -1.12
PTPRM-202ENST00000400053 LCORQ96JN0 433 aaPredicted RBP8.09□□□□□ -1.12
PTPRM-202ENST00000400053 DERL3Q96Q80 235 aa8.09□□□□□ -1.12
PTPRM-202ENST00000400053 S1PR3Q99500 378 aa8.09□□□□□ -1.12
PTPRM-202ENST00000400053 FAM234AQ9H0X4 552 aa8.09□□□□□ -1.12
PTPRM-202ENST00000400053 DLL4Q9NR61 685 aa8.09□□□□□ -1.12
PTPRM-202ENST00000400053 DUSP13Q9UII6 198 aa8.09□□□□□ -1.12
PTPRM-202ENST00000400053 B3GALT5Q9Y2C3 310 aa8.09□□□□□ -1.12
PTPRM-202ENST00000400053 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.08□□□□□ -1.12
PTPRM-202ENST00000400053 NCBP2LA6PVI3 153 aaKnown RBP8.08□□□□□ -1.12
PTPRM-202ENST00000400053 GALR2O43603 387 aaPredicted RBP8.08□□□□□ -1.12
PTPRM-202ENST00000400053 SCRG1O75711 98 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 DUSP1P28562 367 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 MAP2K6P52564 334 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 TRMT12Q53H54 448 aaKnown RBP8.08□□□□□ -1.12
PTPRM-202ENST00000400053 MANEAQ5SRI9 462 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 Q6ZNB5 142 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 BAP18Q8IXM2 172 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 PIGTQ969N2 578 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 IP6K3Q96PC2 410 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 CTDSP1Q9GZU7 261 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 SH3BGRL2Q9UJC5 107 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 FAM96BQ9Y3D0 163 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 LRRC37AA6NMS7 1700 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 QSER1Q2KHR3 1735 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 PRSS38A1L453 326 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 IFITM5A6NNB3 132 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 E5RGE8 158 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 DEGS1O15121 323 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 HIST1H1CP16403 213 aaKnown RBP8.08□□□□□ -1.12
PTPRM-202ENST00000400053 EN2P19622 333 aaPredicted RBP8.08□□□□□ -1.12
PTPRM-202ENST00000400053 PTAFRP25105 342 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 EXT1Q16394 746 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 HAGHQ16775 308 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 TFAP2EQ6VUC0 442 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 ANKRD33Q7Z3H0 272 aa8.08□□□□□ -1.12
PTPRM-202ENST00000400053 TSEN54Q7Z6J9 526 aaKnown RBP8.08□□□□□ -1.12
PTPRM-202ENST00000400053 LRRTM1Q86UE6 522 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms