RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 TRIM63Q969Q1 353 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 SARAFQ96BY9 339 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 SLAMF6Q96DU3 332 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 OR14A2Q96R54 314 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 SNX18Q96RF0 628 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 FOXB1Q99853 325 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 PRORYQ9H606 182 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 HAO2Q9NYQ3 351 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 ZNF224Q9NZL3 707 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 CYB5R1Q9UHQ9 305 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 USP9XQ93008 2570 aaPredicted RBP10.25□□□□□ -0.77
SKA3-203ENST00000400018 A0A0B4J203 849 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 ZNF670-ZNF695F2Z2N8 137 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 C3orf80F5H4A9 247 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 SLC19A2O60779 497 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 VAMP5O95183 116 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 ABHD16AO95870 558 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 ZNF32P17041 273 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 SLC18B1Q6NT16 456 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 TMEM91Q6ZNR0 172 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 ZNF367Q7RTV3 350 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 RNF144BQ7Z419 303 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 KCTD20Q7Z5Y7 419 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 LYSMD2Q8IV50 215 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 CELF2-AS1Q8N7Q2 184 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 ADPRHL1Q8NDY3 354 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 OR2AE1Q8NHA4 323 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 KCNN2Q9H2S1 579 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 ST6GALNAC2Q9UJ37 374 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 SF3B6Q9Y3B4 125 aaKnown RBP10.25□□□□□ -0.77
SKA3-203ENST00000400018 TMEM129A0AVI4 362 aa10.24□□□□□ -0.77
SKA3-203ENST00000400018 CENPXA8MT69 81 aa10.24□□□□□ -0.77
SKA3-203ENST00000400018 TBX1O43435 398 aa10.24□□□□□ -0.77
SKA3-203ENST00000400018 IL18BPO95998 194 aa10.24□□□□□ -0.77
SKA3-203ENST00000400018 ITGA5P08648 1049 aa10.24□□□□□ -0.77
SKA3-203ENST00000400018 CFL1P23528 166 aaKnown RBP10.24□□□□□ -0.77
SKA3-203ENST00000400018 KIR3DL2P43630 455 aa10.24□□□□□ -0.77
SKA3-203ENST00000400018 UQCRFS1P47985 274 aa10.24□□□□□ -0.77
SKA3-203ENST00000400018 OR10A3P58181 314 aa10.24□□□□□ -0.77
SKA3-203ENST00000400018 RSPO1Q2MKA7 263 aaPredicted RBP10.24□□□□□ -0.77
SKA3-203ENST00000400018 ZFP69Q49AA0 526 aa10.24□□□□□ -0.77
SKA3-203ENST00000400018 WDR38Q5JTN6 314 aa10.24□□□□□ -0.77
SKA3-203ENST00000400018 SLC35D3Q5M8T2 416 aa10.24□□□□□ -0.77
SKA3-203ENST00000400018 ZNF684Q5T5D7 378 aa10.24□□□□□ -0.77
SKA3-203ENST00000400018 ZNF324BQ6AW86 544 aaPredicted RBP10.24□□□□□ -0.77
SKA3-203ENST00000400018 LIX1LQ8IVB5 337 aa10.24□□□□□ -0.77
SKA3-203ENST00000400018 OR52N5Q8NH56 324 aa10.24□□□□□ -0.77
SKA3-203ENST00000400018 CYYR1Q96J86 154 aa10.24□□□□□ -0.77
SKA3-203ENST00000400018 PGLYRP3Q96LB9 341 aa10.24□□□□□ -0.77
SKA3-203ENST00000400018 DACH2Q96NX9 599 aa10.24□□□□□ -0.77
SKA3-203ENST00000400018 BBC3Q96PG8 261 aaPredicted RBP10.24□□□□□ -0.77
SKA3-203ENST00000400018 UQCC2Q9BRT2 126 aa10.24□□□□□ -0.77
SKA3-203ENST00000400018 B3GAT2Q9NPZ5 323 aa10.24□□□□□ -0.77
SKA3-203ENST00000400018 PLEK2Q9NYT0 353 aa10.24□□□□□ -0.77
SKA3-203ENST00000400018 HRNRQ86YZ3 2850 aaPredicted RBP10.24□□□□□ -0.77
SKA3-203ENST00000400018 TRGV8A0A0C4DH27 118 aa10.24□□□□□ -0.77
SKA3-203ENST00000400018 MT-ND5P03915 603 aa10.24□□□□□ -0.77
SKA3-203ENST00000400018 FKBP2P26885 142 aaKnown RBP10.24□□□□□ -0.77
SKA3-203ENST00000400018 APEX1P27695 318 aaKnown RBP10.24□□□□□ -0.77
SKA3-203ENST00000400018 SLC6A9P48067 706 aa10.24□□□□□ -0.77
SKA3-203ENST00000400018 POU4F3Q15319 338 aa10.24□□□□□ -0.77
SKA3-203ENST00000400018 DNAAF1Q8NEP3 725 aa10.24□□□□□ -0.77
SKA3-203ENST00000400018 SF3B5Q9BWJ5 86 aaKnown RBP10.24□□□□□ -0.77
SKA3-203ENST00000400018 SNTG1Q9NSN8 517 aa10.24□□□□□ -0.77
SKA3-203ENST00000400018 ATPIF1Q9UII2 106 aa10.24□□□□□ -0.77
SKA3-203ENST00000400018 MOKQ9UQ07 419 aa10.24□□□□□ -0.77
SKA3-203ENST00000400018 A0A1B0GVC2 190 aa10.23□□□□□ -0.77
SKA3-203ENST00000400018 EEF1E1-BLOC1S5C9J1V9 151 aa10.23□□□□□ -0.77
SKA3-203ENST00000400018 P2RY10O00398 339 aa10.23□□□□□ -0.77
SKA3-203ENST00000400018 EEF1E1O43324 174 aaKnown RBP10.23□□□□□ -0.77
SKA3-203ENST00000400018 SERPINB10P48595 397 aa10.23□□□□□ -0.77
SKA3-203ENST00000400018 GDI2P50395 445 aaKnown RBP10.23□□□□□ -0.77
SKA3-203ENST00000400018 ST3GAL2Q16842 350 aa10.23□□□□□ -0.77
SKA3-203ENST00000400018 STEAP3Q658P3 488 aa10.23□□□□□ -0.77
SKA3-203ENST00000400018 TMPRSS11AQ6ZMR5 421 aa10.23□□□□□ -0.77
SKA3-203ENST00000400018 ADGRE4PQ86SQ3 457 aa10.23□□□□□ -0.77
SKA3-203ENST00000400018 NR2C2APQ86WQ0 139 aa10.23□□□□□ -0.77
SKA3-203ENST00000400018 CPEB3Q8NE35 698 aaKnown RBP10.23□□□□□ -0.77
SKA3-203ENST00000400018 KCNS3Q9BQ31 491 aa10.23□□□□□ -0.77
SKA3-203ENST00000400018 NELFAQ9H3P2 528 aa10.23□□□□□ -0.77
SKA3-203ENST00000400018 PNRC2Q9NPJ4 139 aaKnown RBP10.23□□□□□ -0.77
SKA3-203ENST00000400018 TMEM38BQ9NVV0 291 aa10.23□□□□□ -0.77
SKA3-203ENST00000400018 PMF1-BGLAPU3KQ54 211 aa10.23□□□□□ -0.77
SKA3-203ENST00000400018 PLCE1Q9P212 2302 aa10.23□□□□□ -0.77
SKA3-203ENST00000400018 IGHV3-64DA0A0J9YX35 117 aa10.23□□□□□ -0.77
SKA3-203ENST00000400018 LOC102725191A0A1B0GVB3 256 aa10.23□□□□□ -0.77
SKA3-203ENST00000400018 FZD7O75084 574 aa10.23□□□□□ -0.77
SKA3-203ENST00000400018 TNFSF13O75888 250 aa10.23□□□□□ -0.77
SKA3-203ENST00000400018 IGHV1-2P23083 117 aa10.23□□□□□ -0.77
SKA3-203ENST00000400018 UCNP55089 124 aa10.23□□□□□ -0.77
SKA3-203ENST00000400018 FAM122CQ6P4D5 195 aa10.23□□□□□ -0.77
SKA3-203ENST00000400018 SLC16A14Q7RTX9 510 aa10.23□□□□□ -0.77
SKA3-203ENST00000400018 SLC22A24Q8N4F4 322 aa10.23□□□□□ -0.77
SKA3-203ENST00000400018 PAQR4Q8N4S7 273 aaPredicted RBP10.23□□□□□ -0.77
SKA3-203ENST00000400018 UFD1Q92890 307 aa10.23□□□□□ -0.77
SKA3-203ENST00000400018 DACT3Q96B18 629 aaPredicted RBP10.23□□□□□ -0.77
SKA3-203ENST00000400018 BCO1Q9HAY6 547 aa10.23□□□□□ -0.77
SKA3-203ENST00000400018 TXNL4BQ9NX01 149 aaKnown RBP10.23□□□□□ -0.77
SKA3-203ENST00000400018 GABRPO00591 440 aa10.22□□□□□ -0.77
SKA3-203ENST00000400018 H2BFMP0C1H6 154 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms