RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 TRAV20A0A0B4J274 112 aa12.59□□□□□ -0.39
SMIM11A-203ENST00000399299 SURF4O15260 269 aa12.59□□□□□ -0.39
SMIM11A-203ENST00000399299 PHF1O43189 567 aaPredicted RBP12.59□□□□□ -0.39
SMIM11A-203ENST00000399299 DEAF1O75398 565 aaPredicted RBP12.59□□□□□ -0.39
SMIM11A-203ENST00000399299 IGHV2-5P01817 119 aa12.59□□□□□ -0.39
SMIM11A-203ENST00000399299 ACSM4P0C7M7 580 aa12.59□□□□□ -0.39
SMIM11A-203ENST00000399299 ERFP50548 548 aa12.59□□□□□ -0.39
SMIM11A-203ENST00000399299 DBPQ10586 325 aaPredicted RBP12.59□□□□□ -0.39
SMIM11A-203ENST00000399299 LINC00346Q8IVM7 164 aa12.59□□□□□ -0.39
SMIM11A-203ENST00000399299 CYB561A3Q8NBI2 242 aa12.59□□□□□ -0.39
SMIM11A-203ENST00000399299 SLC37A3Q8NCC5 494 aa12.59□□□□□ -0.39
SMIM11A-203ENST00000399299 PROKR2Q8NFJ6 384 aa12.59□□□□□ -0.39
SMIM11A-203ENST00000399299 OR10G2Q8NGC3 310 aa12.59□□□□□ -0.39
SMIM11A-203ENST00000399299 TMEM158Q8WZ71 300 aa12.59□□□□□ -0.39
SMIM11A-203ENST00000399299 RBM4Q9BWF3 364 aaKnown RBP12.59□□□□□ -0.39
SMIM11A-203ENST00000399299 CHID1Q9BWS9 393 aa12.59□□□□□ -0.39
SMIM11A-203ENST00000399299 HIF1ANQ9NWT6 349 aa12.59□□□□□ -0.39
SMIM11A-203ENST00000399299 PTTG3PQ9NZH4 202 aa12.59□□□□□ -0.39
SMIM11A-203ENST00000399299 DNHD1Q96M86 4753 aa12.58□□□□□ -0.39
SMIM11A-203ENST00000399299 DHRS12A0PJE2 317 aa12.58□□□□□ -0.4
SMIM11A-203ENST00000399299 RNF212BA8MTL3 300 aa12.58□□□□□ -0.4
SMIM11A-203ENST00000399299 CST1P01037 141 aa12.58□□□□□ -0.4
SMIM11A-203ENST00000399299 ZNF823P16415 610 aa12.58□□□□□ -0.4
SMIM11A-203ENST00000399299 PYCR1P32322 319 aa12.58□□□□□ -0.4
SMIM11A-203ENST00000399299 SLC25A1P53007 311 aa12.58□□□□□ -0.4
SMIM11A-203ENST00000399299 HLXQ14774 488 aaPredicted RBP12.58□□□□□ -0.4
SMIM11A-203ENST00000399299 SPRNQ5BIV9 151 aa12.58□□□□□ -0.4
SMIM11A-203ENST00000399299 ACSM5Q6NUN0 579 aa12.58□□□□□ -0.4
SMIM11A-203ENST00000399299 PEG10Q86TG7 708 aaKnown RBP12.58□□□□□ -0.4
SMIM11A-203ENST00000399299 ZNF283Q8N7M2 679 aa12.58□□□□□ -0.4
SMIM11A-203ENST00000399299 OR8G5Q8NG78 346 aa12.58□□□□□ -0.4
SMIM11A-203ENST00000399299 OR2Z1Q8NG97 314 aa12.58□□□□□ -0.4
SMIM11A-203ENST00000399299 OR4Q3Q8NH05 313 aa12.58□□□□□ -0.4
SMIM11A-203ENST00000399299 GIPC3Q8TF64 312 aa12.58□□□□□ -0.4
SMIM11A-203ENST00000399299 CANT1Q8WVQ1 401 aa12.58□□□□□ -0.4
SMIM11A-203ENST00000399299 MAP6Q96JE9 813 aa12.58□□□□□ -0.4
SMIM11A-203ENST00000399299 NMNAT2Q9BZQ4 307 aa12.58□□□□□ -0.4
SMIM11A-203ENST00000399299 DDX28Q9NUL7 540 aaKnown RBP12.58□□□□□ -0.4
SMIM11A-203ENST00000399299 A0A1B0GWJ7 208 aa12.57□□□□□ -0.4
SMIM11A-203ENST00000399299 IQCF6A8MYZ5 107 aa12.57□□□□□ -0.4
SMIM11A-203ENST00000399299 GYG2O15488 501 aa12.57□□□□□ -0.4
SMIM11A-203ENST00000399299 SOX14O95416 240 aa12.57□□□□□ -0.4
SMIM11A-203ENST00000399299 IFNGP01579 166 aa12.57□□□□□ -0.4
SMIM11A-203ENST00000399299 SELEP16581 610 aa12.57□□□□□ -0.4
SMIM11A-203ENST00000399299 FMO3P31513 532 aa12.57□□□□□ -0.4
SMIM11A-203ENST00000399299 OTX1P32242 354 aaPredicted RBP12.57□□□□□ -0.4
SMIM11A-203ENST00000399299 SRP14P37108 136 aaKnown RBP12.57□□□□□ -0.4
SMIM11A-203ENST00000399299 TPTEP56180 551 aa12.57□□□□□ -0.4
SMIM11A-203ENST00000399299 CRMP1Q14194 572 aa12.57□□□□□ -0.4
SMIM11A-203ENST00000399299 PCK2Q16822 640 aa12.57□□□□□ -0.4
SMIM11A-203ENST00000399299 TEX30Q5JUR7 227 aa12.57□□□□□ -0.4
SMIM11A-203ENST00000399299 OR2T2Q6IF00 324 aa12.57□□□□□ -0.4
SMIM11A-203ENST00000399299 SLC27A4Q6P1M0 643 aa12.57□□□□□ -0.4
SMIM11A-203ENST00000399299 OR13G1Q8NGZ3 307 aa12.57□□□□□ -0.4
SMIM11A-203ENST00000399299 ZNRF4Q8WWF5 429 aa12.57□□□□□ -0.4
SMIM11A-203ENST00000399299 ZNF582Q96NG8 517 aaPredicted RBP12.57□□□□□ -0.4
SMIM11A-203ENST00000399299 OR2V2Q96R30 315 aa12.57□□□□□ -0.4
SMIM11A-203ENST00000399299 GAL3ST1Q99999 423 aa12.57□□□□□ -0.4
SMIM11A-203ENST00000399299 NIPSNAP1Q9BPW8 284 aa12.57□□□□□ -0.4
SMIM11A-203ENST00000399299 HCAR1Q9BXC0 346 aa12.57□□□□□ -0.4
SMIM11A-203ENST00000399299 LPAR2Q9HBW0 351 aa12.57□□□□□ -0.4
SMIM11A-203ENST00000399299 CMC2Q9NRP2 79 aa12.57□□□□□ -0.4
SMIM11A-203ENST00000399299 TMEM106BQ9NUM4 274 aa12.57□□□□□ -0.4
SMIM11A-203ENST00000399299 ARMC1Q9NVT9 282 aa12.57□□□□□ -0.4
SMIM11A-203ENST00000399299 NPTNQ9Y639 398 aa12.57□□□□□ -0.4
SMIM11A-203ENST00000399299 COMMD3-BMI1R4GMX3 469 aa12.57□□□□□ -0.4
SMIM11A-203ENST00000399299 WNK2Q9Y3S1 2297 aa12.57□□□□□ -0.4
SMIM11A-203ENST00000399299 RIIAD1A6NNX1 92 aa12.56□□□□□ -0.4
SMIM11A-203ENST00000399299 F5H5K5 113 aa12.56□□□□□ -0.4
SMIM11A-203ENST00000399299 IFNL4K9M1U5 179 aa12.56□□□□□ -0.4
SMIM11A-203ENST00000399299 M0R135 149 aa12.56□□□□□ -0.4
SMIM11A-203ENST00000399299 IGHV2-70P01814 119 aa12.56□□□□□ -0.4
SMIM11A-203ENST00000399299 ZNF3P17036 446 aa12.56□□□□□ -0.4
SMIM11A-203ENST00000399299 SPI1P17947 270 aa12.56□□□□□ -0.4
SMIM11A-203ENST00000399299 BLVRAP53004 296 aa12.56□□□□□ -0.4
SMIM11A-203ENST00000399299 FLOT2Q14254 428 aa12.56□□□□□ -0.4
SMIM11A-203ENST00000399299 OR5AS1Q8N127 324 aa12.56□□□□□ -0.4
SMIM11A-203ENST00000399299 TEX29Q8N6K0 151 aa12.56□□□□□ -0.4
SMIM11A-203ENST00000399299 OR10S1Q8NGN2 331 aa12.56□□□□□ -0.4
SMIM11A-203ENST00000399299 OR9Q1Q8NGQ5 310 aa12.56□□□□□ -0.4
SMIM11A-203ENST00000399299 TEX47Q8TBZ9 253 aa12.56□□□□□ -0.4
SMIM11A-203ENST00000399299 ITLN1Q8WWA0 313 aa12.56□□□□□ -0.4
SMIM11A-203ENST00000399299 SPTSSAQ969W0 71 aa12.56□□□□□ -0.4
SMIM11A-203ENST00000399299 SLC7A6OSQ96CW6 309 aaPredicted RBP12.56□□□□□ -0.4
SMIM11A-203ENST00000399299 ZNF799Q96GE5 643 aa12.56□□□□□ -0.4
SMIM11A-203ENST00000399299 FEVQ99581 238 aa12.56□□□□□ -0.4
SMIM11A-203ENST00000399299 SLC30A2Q9BRI3 323 aa12.56□□□□□ -0.4
SMIM11A-203ENST00000399299 YY1AP1Q9H869 796 aa12.56□□□□□ -0.4
SMIM11A-203ENST00000399299 G6PC2Q9NQR9 355 aa12.56□□□□□ -0.4
SMIM11A-203ENST00000399299 PPP1R3CQ9UQK1 317 aa12.56□□□□□ -0.4
SMIM11A-203ENST00000399299 ISPDA4D126 451 aa12.55□□□□□ -0.4
SMIM11A-203ENST00000399299 TVP23AA6NH52 213 aa12.55□□□□□ -0.4
SMIM11A-203ENST00000399299 PLPP2O43688 288 aa12.55□□□□□ -0.4
SMIM11A-203ENST00000399299 PNPP00491 289 aa12.55□□□□□ -0.4
SMIM11A-203ENST00000399299 LCATP04180 440 aa12.55□□□□□ -0.4
SMIM11A-203ENST00000399299 GRK5P34947 590 aa12.55□□□□□ -0.4
SMIM11A-203ENST00000399299 ENTPD1P49961 510 aa12.55□□□□□ -0.4
SMIM11A-203ENST00000399299 MALLQ13021 153 aa12.55□□□□□ -0.4
SMIM11A-203ENST00000399299 GK2Q14410 553 aaPredicted RBP12.55□□□□□ -0.4
SMIM11A-203ENST00000399299 LYPD4Q6UWN0 246 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms