RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 NPPBP16860 134 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 HMGA1P17096 107 aaKnown RBP5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 MYL12AP19105 171 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 SPINT3P49223 89 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 CCL23P55773 120 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 ZXDBP98169 803 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 MRPL23Q16540 153 aaKnown RBP5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 IDNKQ5T6J7 187 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 OTOP2Q7RTS6 562 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 LRRC28Q86X40 367 aaPredicted RBP5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 SHISA5Q8N114 240 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 LGI3Q8N145 548 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 OR4C5Q8NGB2 326 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 ADAMTS17Q8TE56 1095 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 ORAOV1Q8WV07 137 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 TNFAIP8L1Q8WVP5 186 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 TAAR8Q969N4 342 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 UBE2E3Q969T4 207 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 SCNM1Q9BWG6 230 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 RNF167Q9H6Y7 350 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 RLIMQ9NVW2 624 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 FBXL12Q9NXK8 326 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 SLC25A10Q9UBX3 287 aaPredicted RBP5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 OR14J1Q9UGF5 321 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 NUFIP1Q9UHK0 495 aaKnown RBP5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 YIPF1Q9Y548 306 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 VWA8A3KMH1 1905 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 A0A1B0GVI7 797 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 IRGMA1A4Y4 181 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 E7EQ34 232 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 PDE6DO43924 150 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 CDC40O60508 579 aaKnown RBP eCLIP5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 ICOSLGO75144 302 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 TFP02787 698 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 CRYGBP07316 175 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 CSF3P09919 207 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 RAB40ALP0C0E4 278 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 SRFP11831 508 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 B4GALT1P15291 398 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 TNFRSF1BP20333 461 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 AZGP1P25311 298 aaKnown RBP5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 XCR1P46094 333 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 CNN1P51911 297 aaKnown RBP5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 EGR4Q05215 589 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 C2orf80Q0P641 193 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 CDKN3Q16667 212 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 CRB2Q5IJ48 1285 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 SAXO2Q658L1 398 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 ZNF585AQ6P3V2 769 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 TMEM182Q6ZP80 229 aaPredicted RBP5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 TMPPEQ6ZT21 453 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 TMPRSS11BQ86T26 416 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 SVBPQ8N300 66 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 RNF175Q8N4F7 328 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 OR2Z1Q8NG97 314 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 OR4K1Q8NGD4 311 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 OR9G4Q8NGQ1 327 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 RXFP4Q8TDU9 374 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 ST8SIA1Q92185 356 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 CNOT9Q92600 299 aaKnown RBP5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 MRPS31Q92665 395 aaKnown RBP5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 EMG1Q92979 244 aaKnown RBP5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 DIRAS2Q96HU8 199 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 IL4I1Q96RQ9 567 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 MESP1Q9BRJ9 268 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 EFCAB11Q9BUY7 163 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 PLK3Q9H4B4 646 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 ZAR1LA6NP61 321 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 SC5DO75845 299 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 CEACAM4O75871 244 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 EGFP01133 1207 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 ITGB2P05107 769 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 NR2F6P10588 404 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 HMGA2P52926 109 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 RPS13P62277 151 aaKnown RBP5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 PPIAP62937 165 aaKnown RBP5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 ELAVL3Q14576 367 aaKnown RBP5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 PLPPR5Q32ZL2 321 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 AKR1C8PQ5T2L2 129 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 FAM219AQ8IW50 185 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 CMTM8Q8IZV2 173 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 LYG1Q8N1E2 194 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 C11orf42Q8N5U0 333 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 OR4P4Q8NGL7 312 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 OR8D4Q8NGM9 314 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 OR1L6Q8NGR2 347 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 RERGQ96A58 199 aaPredicted RBP5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 CHST8Q9H2A9 424 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 ASAH2Q9NR71 780 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 ACER3Q9NUN7 267 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 SUSD2Q9UGT4 822 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 C14orf166Q9Y224 244 aaKnown RBP5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 NINQ8N4C6 2090 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 A6NNC1 897 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 ZNF587BE7ETH6 402 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 H7C417 338 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 TNFSF15O95150 251 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 SERPINE2P07093 398 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 SELPP16109 830 aa5.92□□□□□ -1.46
TM9SF4-202ENST00000398022 MYL9P24844 172 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms