RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 ZNF35P13682 527 aa20.43■□□□□ 0.86
TSPAN4-203ENST00000397397 ZNF19P17023 458 aa20.43■□□□□ 0.86
TSPAN4-203ENST00000397397 SPOCK1Q08629 439 aa20.43■□□□□ 0.86
TSPAN4-203ENST00000397397 PIAS4Q8N2W9 510 aaPredicted RBP20.43■□□□□ 0.86
TSPAN4-203ENST00000397397 KLHL36Q8N4N3 616 aa20.43■□□□□ 0.86
TSPAN4-203ENST00000397397 ZNF799Q96GE5 643 aa20.43■□□□□ 0.86
TSPAN4-203ENST00000397397 DCLRE1CQ96SD1 692 aaKnown RBP20.43■□□□□ 0.86
TSPAN4-203ENST00000397397 NIPAL2Q9H841 368 aa20.43■□□□□ 0.86
TSPAN4-203ENST00000397397 KCNN3Q9UGI6 736 aa20.43■□□□□ 0.86
TSPAN4-203ENST00000397397 ANKHD1Q8IWZ3 2542 aaKnown RBP20.43■□□□□ 0.86
TSPAN4-203ENST00000397397 CD3EP07766 207 aa20.42■□□□□ 0.86
TSPAN4-203ENST00000397397 ACSM4P0C7M7 580 aa20.42■□□□□ 0.86
TSPAN4-203ENST00000397397 OTX1P32242 354 aaPredicted RBP20.42■□□□□ 0.86
TSPAN4-203ENST00000397397 SLC6A9P48067 706 aa20.42■□□□□ 0.86
TSPAN4-203ENST00000397397 CX3CR1P49238 355 aa20.42■□□□□ 0.86
TSPAN4-203ENST00000397397 NR1H2P55055 460 aa20.42■□□□□ 0.86
TSPAN4-203ENST00000397397 OR12D2P58182 307 aa20.42■□□□□ 0.86
TSPAN4-203ENST00000397397 DAZAP2Q15038 168 aaPredicted RBP20.42■□□□□ 0.86
TSPAN4-203ENST00000397397 TMPRSS11AQ6ZMR5 421 aa20.42■□□□□ 0.86
TSPAN4-203ENST00000397397 PRSS48Q7RTY5 328 aa20.42■□□□□ 0.86
TSPAN4-203ENST00000397397 KCTD20Q7Z5Y7 419 aa20.42■□□□□ 0.86
TSPAN4-203ENST00000397397 RADILQ96JH8 1075 aa20.42■□□□□ 0.86
TSPAN4-203ENST00000397397 C4orf36Q96KX1 117 aa20.42■□□□□ 0.86
TSPAN4-203ENST00000397397 C4orf45Q96LM5 186 aa20.42■□□□□ 0.86
TSPAN4-203ENST00000397397 CDCA4Q9BXL8 241 aa20.42■□□□□ 0.86
TSPAN4-203ENST00000397397 EIF3KQ9UBQ5 218 aaKnown RBP20.42■□□□□ 0.86
TSPAN4-203ENST00000397397 CAB39Q9Y376 341 aaPredicted RBP20.42■□□□□ 0.86
TSPAN4-203ENST00000397397 RTTNQ86VV8 2226 aa20.41■□□□□ 0.86
TSPAN4-203ENST00000397397 TNFAIP8O95379 198 aa20.41■□□□□ 0.86
TSPAN4-203ENST00000397397 ABHD16AO95870 558 aa20.41■□□□□ 0.86
TSPAN4-203ENST00000397397 APOC1P02654 83 aa20.41■□□□□ 0.86
TSPAN4-203ENST00000397397 TACSTD2P09758 323 aa20.41■□□□□ 0.86
TSPAN4-203ENST00000397397 HGFACQ04756 655 aa20.41■□□□□ 0.86
TSPAN4-203ENST00000397397 KCTD21Q4G0X4 260 aa20.41■□□□□ 0.86
TSPAN4-203ENST00000397397 RNLSQ5VYX0 342 aa20.41■□□□□ 0.86
TSPAN4-203ENST00000397397 ARL9Q6T311 187 aa20.41■□□□□ 0.86
TSPAN4-203ENST00000397397 DRAM2Q6UX65 266 aa20.41■□□□□ 0.86
TSPAN4-203ENST00000397397 NAA40Q86UY6 237 aa20.41■□□□□ 0.86
TSPAN4-203ENST00000397397 SIGLEC11Q96RL6 698 aa20.41■□□□□ 0.86
TSPAN4-203ENST00000397397 OR51B6Q9H340 312 aa20.41■□□□□ 0.86
TSPAN4-203ENST00000397397 ISG20L2Q9H9L3 353 aaKnown RBP20.41■□□□□ 0.86
TSPAN4-203ENST00000397397 ERGIC3Q9Y282 383 aa20.41■□□□□ 0.86
TSPAN4-203ENST00000397397 ATP6V1G2-DDX39BF2Z307 99 aa20.4■□□□□ 0.86
TSPAN4-203ENST00000397397 MYL12BO14950 172 aa20.4■□□□□ 0.86
TSPAN4-203ENST00000397397 RPP14O95059 124 aaKnown RBP20.4■□□□□ 0.86
TSPAN4-203ENST00000397397 HTR1AP08908 422 aa20.4■□□□□ 0.86
TSPAN4-203ENST00000397397 WNT5AP41221 380 aa20.4■□□□□ 0.86
TSPAN4-203ENST00000397397 CDH15P55291 814 aa20.4■□□□□ 0.86
TSPAN4-203ENST00000397397 OR2G6Q5TZ20 316 aa20.4■□□□□ 0.86
TSPAN4-203ENST00000397397 LIPNQ5VXI9 398 aa20.4■□□□□ 0.86
TSPAN4-203ENST00000397397 SLC22A25Q6T423 547 aa20.4■□□□□ 0.86
TSPAN4-203ENST00000397397 SYS1Q8N2H4 156 aa20.4■□□□□ 0.86
TSPAN4-203ENST00000397397 SPRYD4Q8WW59 207 aaPredicted RBP20.4■□□□□ 0.86
TSPAN4-203ENST00000397397 NR1H4Q96RI1 486 aaPredicted RBP20.4■□□□□ 0.86
TSPAN4-203ENST00000397397 DOK1Q99704 481 aa20.4■□□□□ 0.86
TSPAN4-203ENST00000397397 BRD7Q9NPI1 651 aa20.4■□□□□ 0.86
TSPAN4-203ENST00000397397 ACOXLQ9NUZ1 547 aa20.4■□□□□ 0.86
TSPAN4-203ENST00000397397 N6AMT1Q9Y5N5 214 aa20.4■□□□□ 0.86
TSPAN4-203ENST00000397397 MT-ND5P03915 603 aa20.39■□□□□ 0.85
TSPAN4-203ENST00000397397 LCATP04180 440 aa20.39■□□□□ 0.85
TSPAN4-203ENST00000397397 ANXA2P07355 339 aaKnown RBP20.39■□□□□ 0.85
TSPAN4-203ENST00000397397 FAM157BP0CG42 384 aa20.39■□□□□ 0.85
TSPAN4-203ENST00000397397 SLC2A1P11166 492 aa20.39■□□□□ 0.85
TSPAN4-203ENST00000397397 LOXP28300 417 aaPredicted RBP20.39■□□□□ 0.85
TSPAN4-203ENST00000397397 DCTDP32321 178 aa20.39■□□□□ 0.85
TSPAN4-203ENST00000397397 ZNF121P58317 390 aaPredicted RBP20.39■□□□□ 0.85
TSPAN4-203ENST00000397397 PSMA6P60900 246 aaKnown RBP20.39■□□□□ 0.85
TSPAN4-203ENST00000397397 IRF3Q14653 427 aa20.39■□□□□ 0.85
TSPAN4-203ENST00000397397 ZNF829Q3KNS6 432 aaPredicted RBP20.39■□□□□ 0.85
TSPAN4-203ENST00000397397 ADAM5Q6NVV9 412 aa20.39■□□□□ 0.85
TSPAN4-203ENST00000397397 NANOGP1Q8N7R0 232 aa20.39■□□□□ 0.85
TSPAN4-203ENST00000397397 OR52N1Q8NH53 320 aa20.39■□□□□ 0.85
TSPAN4-203ENST00000397397 HS3ST6Q96QI5 342 aa20.39■□□□□ 0.85
TSPAN4-203ENST00000397397 RNF115Q9Y4L5 304 aa20.39■□□□□ 0.85
TSPAN4-203ENST00000397397 SPEF1Q9Y4P9 236 aa20.39■□□□□ 0.85
TSPAN4-203ENST00000397397 SNX5Q9Y5X3 404 aa20.39■□□□□ 0.85
TSPAN4-203ENST00000397397 ADGRG4Q8IZF6 3080 aa20.39■□□□□ 0.85
TSPAN4-203ENST00000397397 TMEM269A0A1B0GVZ9 245 aa20.38■□□□□ 0.85
TSPAN4-203ENST00000397397 TMEM129A0AVI4 362 aa20.38■□□□□ 0.85
TSPAN4-203ENST00000397397 A6NNC1 897 aa20.38■□□□□ 0.85
TSPAN4-203ENST00000397397 MRPS14O60783 128 aaKnown RBP20.38■□□□□ 0.85
TSPAN4-203ENST00000397397 PCSK6P29122 969 aa20.38■□□□□ 0.85
TSPAN4-203ENST00000397397 PSMB10P40306 273 aa20.38■□□□□ 0.85
TSPAN4-203ENST00000397397 RGS6P49758 472 aa20.38■□□□□ 0.85
TSPAN4-203ENST00000397397 ZNF787Q6DD87 383 aa20.38■□□□□ 0.85
TSPAN4-203ENST00000397397 EGFL6Q8IUX8 553 aa20.38■□□□□ 0.85
TSPAN4-203ENST00000397397 ATP23Q9Y6H3 246 aa20.38■□□□□ 0.85
TSPAN4-203ENST00000397397 R4GMQ9 66 aa20.38■□□□□ 0.85
TSPAN4-203ENST00000397397 UCP2P55851 309 aa20.37■□□□□ 0.85
TSPAN4-203ENST00000397397 MFGE8Q08431 387 aaPredicted RBP20.37■□□□□ 0.85
TSPAN4-203ENST00000397397 FAM57BQ71RH2 274 aa20.37■□□□□ 0.85
TSPAN4-203ENST00000397397 ZNF101Q8IZC7 436 aa20.37■□□□□ 0.85
TSPAN4-203ENST00000397397 KBTBD8Q8NFY9 601 aa20.37■□□□□ 0.85
TSPAN4-203ENST00000397397 ABHD4Q8TB40 342 aa20.37■□□□□ 0.85
TSPAN4-203ENST00000397397 GATAD2BQ8WXI9 593 aa20.37■□□□□ 0.85
TSPAN4-203ENST00000397397 PELI1Q96FA3 418 aa20.37■□□□□ 0.85
TSPAN4-203ENST00000397397 MND1Q9BWT6 205 aa20.37■□□□□ 0.85
TSPAN4-203ENST00000397397 C1QTNF5Q9BXJ0 243 aa20.37■□□□□ 0.85
TSPAN4-203ENST00000397397 TBCCD1Q9NVR7 557 aa20.37■□□□□ 0.85
TSPAN4-203ENST00000397397 POU2F3Q9UKI9 436 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms