RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 APOBEC3DQ96AK3 386 aaPredicted RBP25.22■■□□□ 1.63
CHCHD4-202ENST00000396914 MARS2Q96GW9 593 aaKnown RBP25.22■■□□□ 1.63
CHCHD4-202ENST00000396914 AMELYQ99218 206 aa25.22■■□□□ 1.63
CHCHD4-202ENST00000396914 TAAR3PQ9P1P4 343 aa25.22■■□□□ 1.63
CHCHD4-202ENST00000396914 GPR160Q9UJ42 338 aa25.22■■□□□ 1.63
CHCHD4-202ENST00000396914 CCDC168Q8NDH2 2452 aa25.22■■□□□ 1.63
CHCHD4-202ENST00000396914 M0R233 179 aa25.21■■□□□ 1.63
CHCHD4-202ENST00000396914 ADRA2AP08913 450 aa25.21■■□□□ 1.63
CHCHD4-202ENST00000396914 HTR1FP30939 366 aa25.21■■□□□ 1.63
CHCHD4-202ENST00000396914 MPV17P39210 176 aa25.21■■□□□ 1.63
CHCHD4-202ENST00000396914 ALDH3B1P43353 468 aa25.21■■□□□ 1.63
CHCHD4-202ENST00000396914 GRB2P62993 217 aaKnown RBP25.21■■□□□ 1.63
CHCHD4-202ENST00000396914 ZNF283Q8N7M2 679 aa25.21■■□□□ 1.63
CHCHD4-202ENST00000396914 OR51G2Q8NGK0 314 aa25.21■■□□□ 1.63
CHCHD4-202ENST00000396914 KCNJ15Q99712 375 aa25.21■■□□□ 1.63
CHCHD4-202ENST00000396914 PTTG3PQ9NZH4 202 aa25.21■■□□□ 1.63
CHCHD4-202ENST00000396914 KLHDC2Q9Y2U9 406 aa25.21■■□□□ 1.63
CHCHD4-202ENST00000396914 H7C417 338 aa25.2■■□□□ 1.63
CHCHD4-202ENST00000396914 NDUFS7O75251 213 aa25.2■■□□□ 1.63
CHCHD4-202ENST00000396914 SNRPGP62308 76 aaKnown RBP25.2■■□□□ 1.63
CHCHD4-202ENST00000396914 GGTLC2Q14390 218 aa25.2■■□□□ 1.63
CHCHD4-202ENST00000396914 SNX33Q8WV41 574 aa25.2■■□□□ 1.63
CHCHD4-202ENST00000396914 RNF133Q8WVZ7 376 aa25.2■■□□□ 1.63
CHCHD4-202ENST00000396914 APOL4Q9BPW4 351 aa25.2■■□□□ 1.63
CHCHD4-202ENST00000396914 POFUT1Q9H488 388 aa25.2■■□□□ 1.63
CHCHD4-202ENST00000396914 SLCO1C1Q9NYB5 712 aa25.2■■□□□ 1.63
CHCHD4-202ENST00000396914 AASSQ9UDR5 926 aa25.2■■□□□ 1.63
CHCHD4-202ENST00000396914 E9PQ18 207 aa25.2■■□□□ 1.62
CHCHD4-202ENST00000396914 SLC16A6O15403 523 aa25.2■■□□□ 1.62
CHCHD4-202ENST00000396914 ENTPD6O75354 484 aa25.2■■□□□ 1.62
CHCHD4-202ENST00000396914 ERCC1P07992 297 aaPredicted RBP25.2■■□□□ 1.62
CHCHD4-202ENST00000396914 PAX1P15863 534 aa25.2■■□□□ 1.62
CHCHD4-202ENST00000396914 PPOXP50336 477 aa25.2■■□□□ 1.62
CHCHD4-202ENST00000396914 MOGQ16653 247 aa25.2■■□□□ 1.62
CHCHD4-202ENST00000396914 KRTAP27-1Q3LI81 207 aa25.2■■□□□ 1.62
CHCHD4-202ENST00000396914 Q5PR19 223 aa25.2■■□□□ 1.62
CHCHD4-202ENST00000396914 KRT77Q7Z794 578 aa25.2■■□□□ 1.62
CHCHD4-202ENST00000396914 SLC35F2Q8IXU6 374 aa25.2■■□□□ 1.62
CHCHD4-202ENST00000396914 ZCCHC24Q8N2G6 241 aaKnown RBP25.2■■□□□ 1.62
CHCHD4-202ENST00000396914 TTTY10Q9BZA0 68 aa25.2■■□□□ 1.62
CHCHD4-202ENST00000396914 CXXC4Q9H2H0 198 aa25.2■■□□□ 1.62
CHCHD4-202ENST00000396914 ADGRL4Q9HBW9 690 aa25.2■■□□□ 1.62
CHCHD4-202ENST00000396914 TMEM14AQ9Y6G1 99 aa25.2■■□□□ 1.62
CHCHD4-202ENST00000396914 DLGAP1O14490 977 aa25.19■■□□□ 1.62
CHCHD4-202ENST00000396914 MPZL2O60487 215 aa25.19■■□□□ 1.62
CHCHD4-202ENST00000396914 APOL3O95236 402 aa25.19■■□□□ 1.62
CHCHD4-202ENST00000396914 IGHV4-39P01824 125 aa25.19■■□□□ 1.62
CHCHD4-202ENST00000396914 TUBG1P23258 451 aa25.19■■□□□ 1.62
CHCHD4-202ENST00000396914 CX3CR1P49238 355 aa25.19■■□□□ 1.62
CHCHD4-202ENST00000396914 MEDAGQ5VYS4 303 aa25.19■■□□□ 1.62
CHCHD4-202ENST00000396914 MBNL2Q5VZF2 373 aaKnown RBP25.19■■□□□ 1.62
CHCHD4-202ENST00000396914 DRAM2Q6UX65 266 aa25.19■■□□□ 1.62
CHCHD4-202ENST00000396914 ENTHD1Q8IYW4 607 aa25.19■■□□□ 1.62
CHCHD4-202ENST00000396914 DHRSXQ8N5I4 330 aa25.19■■□□□ 1.62
CHCHD4-202ENST00000396914 CMBLQ96DG6 245 aa25.19■■□□□ 1.62
CHCHD4-202ENST00000396914 C1QTNF5Q9BXJ0 243 aa25.19■■□□□ 1.62
CHCHD4-202ENST00000396914 RAB1BQ9H0U4 201 aa25.19■■□□□ 1.62
CHCHD4-202ENST00000396914 TPK1Q9H3S4 243 aa25.19■■□□□ 1.62
CHCHD4-202ENST00000396914 BARX1Q9HBU1 254 aaPredicted RBP25.19■■□□□ 1.62
CHCHD4-202ENST00000396914 TUBG2Q9NRH3 451 aa25.19■■□□□ 1.62
CHCHD4-202ENST00000396914 CLN6Q9NWW5 311 aa25.19■■□□□ 1.62
CHCHD4-202ENST00000396914 HAO2Q9NYQ3 351 aa25.19■■□□□ 1.62
CHCHD4-202ENST00000396914 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP25.19■■□□□ 1.62
CHCHD4-202ENST00000396914 USF3Q68DE3 2245 aa25.18■■□□□ 1.62
CHCHD4-202ENST00000396914 SNTNA6NMZ2 147 aa25.18■■□□□ 1.62
CHCHD4-202ENST00000396914 J3QW42 95 aa25.18■■□□□ 1.62
CHCHD4-202ENST00000396914 SLC2A1P11166 492 aa25.18■■□□□ 1.62
CHCHD4-202ENST00000396914 ALOX5APP20292 161 aa25.18■■□□□ 1.62
CHCHD4-202ENST00000396914 IL5RAQ01344 420 aa25.18■■□□□ 1.62
CHCHD4-202ENST00000396914 POU4F2Q12837 409 aa25.18■■□□□ 1.62
CHCHD4-202ENST00000396914 MALLQ13021 153 aa25.18■■□□□ 1.62
CHCHD4-202ENST00000396914 TTC23Q5W5X9 447 aa25.18■■□□□ 1.62
CHCHD4-202ENST00000396914 KCTD18Q6PI47 426 aaPredicted RBP25.18■■□□□ 1.62
CHCHD4-202ENST00000396914 LRRN1Q6UXK5 716 aa25.18■■□□□ 1.62
CHCHD4-202ENST00000396914 MS4A5Q9H3V2 200 aa25.18■■□□□ 1.62
CHCHD4-202ENST00000396914 IGLV3-9A0A075B6K5 115 aa25.17■■□□□ 1.62
CHCHD4-202ENST00000396914 H3BSA7 217 aa25.17■■□□□ 1.62
CHCHD4-202ENST00000396914 TIMM8AO60220 97 aaPredicted RBP25.17■■□□□ 1.62
CHCHD4-202ENST00000396914 SSX4O60224 188 aa25.17■■□□□ 1.62
CHCHD4-202ENST00000396914 IGHV3-13P01766 116 aa25.17■■□□□ 1.62
CHCHD4-202ENST00000396914 MT-ND5P03915 603 aa25.17■■□□□ 1.62
CHCHD4-202ENST00000396914 ANXA2P07355 339 aaKnown RBP25.17■■□□□ 1.62
CHCHD4-202ENST00000396914 NAT2P11245 290 aa25.17■■□□□ 1.62
CHCHD4-202ENST00000396914 OPRL1P41146 370 aa25.17■■□□□ 1.62
CHCHD4-202ENST00000396914 HLXQ14774 488 aaPredicted RBP25.17■■□□□ 1.62
CHCHD4-202ENST00000396914 OCLNQ16625 522 aa25.17■■□□□ 1.62
CHCHD4-202ENST00000396914 SHEQ5VZ18 495 aa25.17■■□□□ 1.62
CHCHD4-202ENST00000396914 Q96MT0 163 aa25.17■■□□□ 1.62
CHCHD4-202ENST00000396914 SORCS2Q96PQ0 1159 aa25.17■■□□□ 1.62
CHCHD4-202ENST00000396914 TBX5Q99593 518 aa25.17■■□□□ 1.62
CHCHD4-202ENST00000396914 BRD7Q9NPI1 651 aa25.17■■□□□ 1.62
CHCHD4-202ENST00000396914 IKZF2Q9UKS7 526 aa25.17■■□□□ 1.62
CHCHD4-202ENST00000396914 PLSCR5A0PG75 271 aa25.16■■□□□ 1.62
CHCHD4-202ENST00000396914 ZNF670-ZNF695F2Z2N8 137 aa25.16■■□□□ 1.62
CHCHD4-202ENST00000396914 PSMD9O00233 223 aa25.16■■□□□ 1.62
CHCHD4-202ENST00000396914 APOC1P02654 83 aa25.16■■□□□ 1.62
CHCHD4-202ENST00000396914 SBK2P0C263 348 aa25.16■■□□□ 1.62
CHCHD4-202ENST00000396914 TMED1Q13445 227 aa25.16■■□□□ 1.62
CHCHD4-202ENST00000396914 SLC25A30Q5SVS4 291 aa25.16■■□□□ 1.62
CHCHD4-202ENST00000396914 ASB17Q8WXJ9 295 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms