RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 DAOP14920 347 aa8.89□□□□□ -0.99
NEDD8-202ENST00000396828 CBR1P16152 277 aa8.89□□□□□ -0.99
NEDD8-202ENST00000396828 MYL12AP19105 171 aa8.89□□□□□ -0.99
NEDD8-202ENST00000396828 GSTT1P30711 240 aa8.89□□□□□ -0.99
NEDD8-202ENST00000396828 GUCA1AP43080 201 aaPredicted RBP8.89□□□□□ -0.99
NEDD8-202ENST00000396828 SLC15A1P46059 708 aa8.89□□□□□ -0.99
NEDD8-202ENST00000396828 PPOXP50336 477 aa8.89□□□□□ -0.99
NEDD8-202ENST00000396828 ST3GAL4Q11206 333 aa8.89□□□□□ -0.99
NEDD8-202ENST00000396828 HIST3H3Q16695 136 aa8.89□□□□□ -0.99
NEDD8-202ENST00000396828 CR1LQ2VPA4 569 aa8.89□□□□□ -0.99
NEDD8-202ENST00000396828 CEACAM16Q2WEN9 425 aa8.89□□□□□ -0.99
NEDD8-202ENST00000396828 ZNF773Q6PK81 442 aa8.89□□□□□ -0.99
NEDD8-202ENST00000396828 PRSS48Q7RTY5 328 aa8.89□□□□□ -0.99
NEDD8-202ENST00000396828 ABHD12BQ7Z5M8 362 aaPredicted RBP8.89□□□□□ -0.99
NEDD8-202ENST00000396828 MDP1Q86V88 176 aa8.89□□□□□ -0.99
NEDD8-202ENST00000396828 GLB1L2Q8IW92 636 aa8.89□□□□□ -0.99
NEDD8-202ENST00000396828 TMEM123Q8N131 208 aa8.89□□□□□ -0.99
NEDD8-202ENST00000396828 OR6V1Q8N148 313 aa8.89□□□□□ -0.99
NEDD8-202ENST00000396828 GPR137CQ8N3F9 429 aa8.89□□□□□ -0.99
NEDD8-202ENST00000396828 SVOPQ8N4V2 548 aa8.89□□□□□ -0.99
NEDD8-202ENST00000396828 OR51L1Q8NGJ5 315 aa8.89□□□□□ -0.99
NEDD8-202ENST00000396828 OR51G2Q8NGK0 314 aa8.89□□□□□ -0.99
NEDD8-202ENST00000396828 TMEM54Q969K7 222 aa8.89□□□□□ -0.99
NEDD8-202ENST00000396828 LGALS12Q96DT0 336 aa8.89□□□□□ -0.99
NEDD8-202ENST00000396828 TSSK2Q96PF2 358 aa8.89□□□□□ -0.99
NEDD8-202ENST00000396828 MYCBPQ99417 103 aaPredicted RBP8.89□□□□□ -0.99
NEDD8-202ENST00000396828 CNN2Q99439 309 aaKnown RBP8.89□□□□□ -0.99
NEDD8-202ENST00000396828 KCNS3Q9BQ31 491 aa8.89□□□□□ -0.99
NEDD8-202ENST00000396828 MRPS26Q9BYN8 205 aaKnown RBP8.89□□□□□ -0.99
NEDD8-202ENST00000396828 RACGAP1Q9H0H5 632 aa8.89□□□□□ -0.99
NEDD8-202ENST00000396828 CRLF2Q9HC73 371 aa8.89□□□□□ -0.99
NEDD8-202ENST00000396828 MRPS18AQ9NVS2 196 aaKnown RBP8.89□□□□□ -0.99
NEDD8-202ENST00000396828 FKBP14Q9NWM8 211 aa8.89□□□□□ -0.99
NEDD8-202ENST00000396828 CHCHD3Q9NX63 227 aaKnown RBP8.89□□□□□ -0.99
NEDD8-202ENST00000396828 ERVK-18Q9QC07 812 aa8.89□□□□□ -0.99
NEDD8-202ENST00000396828 CLPTM1O96005 669 aa8.88□□□□□ -0.99
NEDD8-202ENST00000396828 CDK1P06493 297 aa8.88□□□□□ -0.99
NEDD8-202ENST00000396828 ADRA2AP08913 450 aa8.88□□□□□ -0.99
NEDD8-202ENST00000396828 ATP6V1B1P15313 513 aa8.88□□□□□ -0.99
NEDD8-202ENST00000396828 CTLA4P16410 223 aa8.88□□□□□ -0.99
NEDD8-202ENST00000396828 NPR2P20594 1047 aa8.88□□□□□ -0.99
NEDD8-202ENST00000396828 GIFP27352 417 aa8.88□□□□□ -0.99
NEDD8-202ENST00000396828 DCKP27707 260 aa8.88□□□□□ -0.99
NEDD8-202ENST00000396828 PYCR1P32322 319 aa8.88□□□□□ -0.99
NEDD8-202ENST00000396828 THBS2P35442 1172 aa8.88□□□□□ -0.99
NEDD8-202ENST00000396828 ZNF84P51523 738 aa8.88□□□□□ -0.99
NEDD8-202ENST00000396828 CDH15P55291 814 aa8.88□□□□□ -0.99
NEDD8-202ENST00000396828 ACTC1P68032 377 aa8.88□□□□□ -0.99
NEDD8-202ENST00000396828 ACTA1P68133 377 aa8.88□□□□□ -0.99
NEDD8-202ENST00000396828 FMODQ06828 376 aa8.88□□□□□ -0.99
NEDD8-202ENST00000396828 C3orf36Q3SXR2 165 aa8.88□□□□□ -0.99
NEDD8-202ENST00000396828 C1QTNF12Q5T7M4 302 aa8.88□□□□□ -0.99
NEDD8-202ENST00000396828 TMEM154Q6P9G4 183 aa8.88□□□□□ -0.99
NEDD8-202ENST00000396828 LRP11Q86VZ4 500 aa8.88□□□□□ -0.99
NEDD8-202ENST00000396828 C20orf196Q8IYI0 205 aa8.88□□□□□ -0.99
NEDD8-202ENST00000396828 FAM169BQ8N8A8 192 aa8.88□□□□□ -0.99
NEDD8-202ENST00000396828 NUP37Q8NFH4 326 aa8.88□□□□□ -0.99
NEDD8-202ENST00000396828 OR52I1Q8NGK6 324 aa8.88□□□□□ -0.99
NEDD8-202ENST00000396828 MCHR2Q969V1 340 aa8.88□□□□□ -0.99
NEDD8-202ENST00000396828 ZMYND19Q96E35 227 aaPredicted RBP8.88□□□□□ -0.99
NEDD8-202ENST00000396828 ZNF75AQ96N20 296 aa8.88□□□□□ -0.99
NEDD8-202ENST00000396828 ULBP2Q9BZM5 246 aa8.88□□□□□ -0.99
NEDD8-202ENST00000396828 TPK1Q9H3S4 243 aa8.88□□□□□ -0.99
NEDD8-202ENST00000396828 FGF20Q9NP95 211 aaPredicted RBP8.88□□□□□ -0.99
NEDD8-202ENST00000396828 PAK1IP1Q9NWT1 392 aaPredicted RBP8.88□□□□□ -0.99
NEDD8-202ENST00000396828 B3GNT2Q9NY97 397 aa8.88□□□□□ -0.99
NEDD8-202ENST00000396828 GLTPQ9NZD2 209 aa8.88□□□□□ -0.99
NEDD8-202ENST00000396828 ZNF224Q9NZL3 707 aa8.88□□□□□ -0.99
NEDD8-202ENST00000396828 DIMT1Q9UNQ2 313 aaKnown RBP8.88□□□□□ -0.99
NEDD8-202ENST00000396828 EXOGQ9Y2C4 368 aaKnown RBP8.88□□□□□ -0.99
NEDD8-202ENST00000396828 COA3Q9Y2R0 106 aaPredicted RBP8.88□□□□□ -0.99
NEDD8-202ENST00000396828 COMMD3-BMI1R4GMX3 469 aa8.88□□□□□ -0.99
NEDD8-202ENST00000396828 IGLV1-36A0A0B4J1U3 117 aa8.87□□□□□ -0.99
NEDD8-202ENST00000396828 A0A1W2PPL8 197 aa8.87□□□□□ -0.99
NEDD8-202ENST00000396828 DAPL1A0PJW8 107 aa8.87□□□□□ -0.99
NEDD8-202ENST00000396828 DCTN6O00399 190 aa8.87□□□□□ -0.99
NEDD8-202ENST00000396828 HLA-HP01893 362 aa8.87□□□□□ -0.99
NEDD8-202ENST00000396828 MRPL3P09001 348 aaKnown RBP8.87□□□□□ -0.99
NEDD8-202ENST00000396828 TACSTD2P09758 323 aa8.87□□□□□ -0.99
NEDD8-202ENST00000396828 SBK2P0C263 348 aa8.87□□□□□ -0.99
NEDD8-202ENST00000396828 ZNF823P16415 610 aa8.87□□□□□ -0.99
NEDD8-202ENST00000396828 LAP3P28838 519 aa8.87□□□□□ -0.99
NEDD8-202ENST00000396828 MVKQ03426 396 aa8.87□□□□□ -0.99
NEDD8-202ENST00000396828 PIGFQ07326 219 aa8.87□□□□□ -0.99
NEDD8-202ENST00000396828 SNTB2Q13425 540 aaKnown RBP8.87□□□□□ -0.99
NEDD8-202ENST00000396828 RIN1Q13671 783 aa8.87□□□□□ -0.99
NEDD8-202ENST00000396828 LINC01590Q5TEZ4 76 aa8.87□□□□□ -0.99
NEDD8-202ENST00000396828 SLC25A47Q6Q0C1 308 aa8.87□□□□□ -0.99
NEDD8-202ENST00000396828 SLC16A9Q7RTY1 509 aa8.87□□□□□ -0.99
NEDD8-202ENST00000396828 OR4F15Q8NGB8 312 aa8.87□□□□□ -0.99
NEDD8-202ENST00000396828 NSMAFQ92636 917 aa8.87□□□□□ -0.99
NEDD8-202ENST00000396828 NMD3Q96D46 503 aaKnown RBP8.87□□□□□ -0.99
NEDD8-202ENST00000396828 MRPL48Q96GC5 212 aaKnown RBP8.87□□□□□ -0.99
NEDD8-202ENST00000396828 INTS14Q96SY0 518 aa8.87□□□□□ -0.99
NEDD8-202ENST00000396828 MNTQ99583 582 aa8.87□□□□□ -0.99
NEDD8-202ENST00000396828 CDCA4Q9BXL8 241 aa8.87□□□□□ -0.99
NEDD8-202ENST00000396828 MRPL37Q9BZE1 423 aaKnown RBP8.87□□□□□ -0.99
NEDD8-202ENST00000396828 RAB1BQ9H0U4 201 aa8.87□□□□□ -0.99
NEDD8-202ENST00000396828 ZNF442Q9H7R0 627 aa8.87□□□□□ -0.99
NEDD8-202ENST00000396828 ADGRL4Q9HBW9 690 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms