RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 UBE2FQ969M7 185 aa4.96□□□□□ -1.61
VPS13C-204ENST00000395898 ZC3HAV1LQ96H79 300 aaKnown RBP4.96□□□□□ -1.61
VPS13C-204ENST00000395898 NAA50Q9GZZ1 169 aaKnown RBP4.96□□□□□ -1.61
VPS13C-204ENST00000395898 TAS2R5Q9NYW4 299 aa4.96□□□□□ -1.61
VPS13C-204ENST00000395898 FLVCR1Q9Y5Y0 555 aa4.96□□□□□ -1.61
VPS13C-204ENST00000395898 COL5A3P25940 1745 aaPredicted RBP4.96□□□□□ -1.61
VPS13C-204ENST00000395898 XKRY2A2RUG3 117 aa4.96□□□□□ -1.61
VPS13C-204ENST00000395898 ANKRD61A6NGH8 418 aa4.96□□□□□ -1.61
VPS13C-204ENST00000395898 H0Y8X5 98 aa4.96□□□□□ -1.61
VPS13C-204ENST00000395898 BHLHE40O14503 412 aa4.96□□□□□ -1.61
VPS13C-204ENST00000395898 F10P00742 488 aa4.96□□□□□ -1.61
VPS13C-204ENST00000395898 H2AFB1P0C5Y9 115 aa4.96□□□□□ -1.61
VPS13C-204ENST00000395898 ZDHHC11BP0C7U3 371 aa4.96□□□□□ -1.61
VPS13C-204ENST00000395898 IRS1P35568 1242 aa4.96□□□□□ -1.61
VPS13C-204ENST00000395898 DDOSTP39656 456 aa4.96□□□□□ -1.61
VPS13C-204ENST00000395898 SUMO3P55854 103 aaPredicted RBP4.96□□□□□ -1.61
VPS13C-204ENST00000395898 DEFA6Q01524 100 aa4.96□□□□□ -1.61
VPS13C-204ENST00000395898 NLRC3Q7RTR2 1065 aa4.96□□□□□ -1.61
VPS13C-204ENST00000395898 OR2G3Q8NGZ4 309 aa4.96□□□□□ -1.61
VPS13C-204ENST00000395898 PKMYT1Q99640 499 aa4.96□□□□□ -1.61
VPS13C-204ENST00000395898 SLC17A4Q9Y2C5 497 aa4.96□□□□□ -1.61
VPS13C-204ENST00000395898 IFITM5A6NNB3 132 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 CXCL10P02778 98 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 GPR12P47775 334 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 HYAL4Q2M3T9 481 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 ZNF718Q3SXZ3 478 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 SUMF1Q8NBK3 374 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 NT5CQ8TCD5 201 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 SLC35B4Q969S0 331 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 C6orf106Q9H6K1 298 aaPredicted RBP4.96□□□□□ -1.62
VPS13C-204ENST00000395898 PATJQ8NI35 1801 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 LILRA5A6NI73 299 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 ABCD4O14678 606 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 ST6GAL1P15907 406 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 KCNAB1Q14722 419 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 TAF9Q16594 264 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 DVL3Q92997 716 aaPredicted RBP4.96□□□□□ -1.62
VPS13C-204ENST00000395898 QPCTLQ9NXS2 382 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 PROCRQ9UNN8 238 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 LOC107986453A0A1B0GWG9 222 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 HMX2A2RU54 273 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 SNRPGP15A8MWD9 76 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 MKRN2OSH3BPM6 223 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 ICOSLGO75144 302 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 C1QBP02746 253 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 CT45A10P0DMU9 189 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 RPL18Q07020 188 aaKnown RBP4.96□□□□□ -1.62
VPS13C-204ENST00000395898 PCK2Q16822 640 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 Q6ZNB5 142 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 BCDIN3DQ7Z5W3 292 aaKnown RBP4.96□□□□□ -1.62
VPS13C-204ENST00000395898 FAM185AQ8N0U4 392 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 SPEM1Q8N4L4 309 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 OR10P1Q8NGE3 313 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 C16orf52Q8NHV5 167 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 APH1BQ8WW43 257 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 IER2Q9BTL4 223 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 TAS2R4Q9NYW5 299 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 SLC23A1Q9UHI7 598 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 CHD5Q8TDI0 1954 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 TAF1LQ8IZX4 1826 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 ASXL3Q9C0F0 2248 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 TRBV5-4A0A0C4DH59 114 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 NRG2O14511 850 aaPredicted RBP4.96□□□□□ -1.62
VPS13C-204ENST00000395898 IGHV3-9P01782 118 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 CRYABP02511 175 aaKnown RBP4.96□□□□□ -1.62
VPS13C-204ENST00000395898 OR10J4P0C629 311 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 MMP15P51511 669 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 SHBQ15464 509 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 ACKR1Q16570 336 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 BAK1Q16611 211 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 PRSS45Q7RTY3 260 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 ABI3BPQ7Z7G0 1075 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 CADM4Q8NFZ8 388 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 OR51A4Q8NGJ6 313 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 BANF2Q9H503 90 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 PLEKHA2Q9HB19 425 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 GPR84Q9NQS5 396 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 SLCO1B1Q9Y6L6 691 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 TRAV1-2A0A0B4J238 106 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 ATP6V1G2-DDX39BF2Z307 99 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 M0QYG6 137 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 PTAFRP25105 342 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 ACKR3P25106 362 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 UBE2G1P62253 170 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 BTG2P78543 158 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 CARFQ8N187 725 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 DTWD2Q8NBA8 298 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 OR1M1Q8NGA1 313 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 OR1N1Q8NGS0 311 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 OR5H6Q8NGV6 325 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 TRIB1Q96RU8 372 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 FAM117AQ9C073 453 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 CHST2Q9Y4C5 530 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 NUPL2O15504 423 aaKnown RBP4.96□□□□□ -1.62
VPS13C-204ENST00000395898 GUSBP08236 651 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 OR10A3P58181 314 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 ASAH1Q13510 395 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 PRAMEF5Q5TYX0 476 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 PRAMEF6Q5VXH4 476 aa4.96□□□□□ -1.62
VPS13C-204ENST00000395898 ZDHHC23Q8IYP9 409 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms