RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 ZNF160Q9HCG1 818 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 SH2D2AQ9NP31 389 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 EMC7Q9NPA0 242 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 SDHAF2Q9NX18 166 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 SLC39A1Q9NY26 324 aa12.4□□□□□ -0.42
SNCA-204ENST00000394989 CGGBP1Q9UFW8 167 aaPredicted RBP12.4□□□□□ -0.42
SNCA-204ENST00000394989 LOC100289279A0A1B0GTE1 492 aa12.39□□□□□ -0.43
SNCA-204ENST00000394989 G3V3Y1 287 aa12.39□□□□□ -0.43
SNCA-204ENST00000394989 P2RY10O00398 339 aa12.39□□□□□ -0.43
SNCA-204ENST00000394989 CD2P06729 351 aa12.39□□□□□ -0.43
SNCA-204ENST00000394989 H2BFMP0C1H6 154 aa12.39□□□□□ -0.43
SNCA-204ENST00000394989 EIF1P41567 113 aaKnown RBP12.39□□□□□ -0.43
SNCA-204ENST00000394989 CLRN1P58418 232 aa12.39□□□□□ -0.43
SNCA-204ENST00000394989 GLYATL3Q5SZD4 288 aa12.39□□□□□ -0.43
SNCA-204ENST00000394989 CARD17Q5XLA6 110 aa12.39□□□□□ -0.43
SNCA-204ENST00000394989 OLFML2AQ68BL7 652 aa12.39□□□□□ -0.43
SNCA-204ENST00000394989 LYPD6Q86Y78 171 aa12.39□□□□□ -0.43
SNCA-204ENST00000394989 TMEM105Q8N8V8 129 aa12.39□□□□□ -0.43
SNCA-204ENST00000394989 ZBTB8AQ96BR9 441 aa12.39□□□□□ -0.43
SNCA-204ENST00000394989 PISDQ9UG56 409 aa12.39□□□□□ -0.43
SNCA-204ENST00000394989 PMS2P1A4D2B8 440 aa12.39□□□□□ -0.43
SNCA-204ENST00000394989 AQP7P3A6NL99 342 aa12.39□□□□□ -0.43
SNCA-204ENST00000394989 TTRP02766 147 aa12.39□□□□□ -0.43
SNCA-204ENST00000394989 PSMB1P20618 241 aaKnown RBP12.39□□□□□ -0.43
SNCA-204ENST00000394989 ACHEP22303 614 aa12.39□□□□□ -0.43
SNCA-204ENST00000394989 ANOS1P23352 680 aa12.39□□□□□ -0.43
SNCA-204ENST00000394989 ZNF239Q16600 458 aaKnown RBP12.39□□□□□ -0.43
SNCA-204ENST00000394989 HIST3H3Q16695 136 aa12.39□□□□□ -0.43
SNCA-204ENST00000394989 ZNF468Q5VIY5 522 aaPredicted RBP12.39□□□□□ -0.43
SNCA-204ENST00000394989 ELMOD3Q96FG2 381 aa12.39□□□□□ -0.43
SNCA-204ENST00000394989 RADILQ96JH8 1075 aa12.39□□□□□ -0.43
SNCA-204ENST00000394989 ANGPTL4Q9BY76 406 aa12.39□□□□□ -0.43
SNCA-204ENST00000394989 RHBDD3Q9Y3P4 386 aa12.39□□□□□ -0.43
SNCA-204ENST00000394989 SDK2Q58EX2 2172 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 SIX6O95475 246 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 IGHG1P01857 330 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 VEGFCP49767 419 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 AP3S2P59780 193 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 GUCA2AQ02747 115 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 ELFN2Q5R3F8 820 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 CD276Q5ZPR3 534 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 OPN5Q6U736 354 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 ATRAIDQ6UW56 229 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 GTPBP8Q8N3Z3 284 aaPredicted RBP12.38□□□□□ -0.43
SNCA-204ENST00000394989 PAQR8Q8TEZ7 354 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 SLC25A43Q8WUT9 341 aaPredicted RBP12.38□□□□□ -0.43
SNCA-204ENST00000394989 SFXN2Q96NB2 322 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 NECAB3Q96P71 396 aaPredicted RBP12.38□□□□□ -0.43
SNCA-204ENST00000394989 CKLFQ9UBR5 152 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 HDGFL3Q9Y3E1 203 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 ARID1AO14497 2285 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 DCDC2BA2VCK2 349 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 PEX14O75381 377 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 RPS18P62269 152 aaKnown RBP12.38□□□□□ -0.43
SNCA-204ENST00000394989 H3F3AP84243 136 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 SPOCK1Q08629 439 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 LINC00303Q3SY05 128 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 SLC25A47Q6Q0C1 308 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.38□□□□□ -0.43
SNCA-204ENST00000394989 OR10H5Q8NGA6 315 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 OR6X1Q8NH79 312 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 OXGR1Q96P68 337 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 ACTR6Q9GZN1 396 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 OR10A4Q9H209 315 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 PCSK5Q92824 1860 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 NAP1L6A6NFF2 107 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 H7C417 338 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 ACP1P24666 158 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 HTR2CP28335 458 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 SSR4P51571 173 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 DEFA5Q01523 94 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 ZNF704Q6ZNC4 412 aaPredicted RBP12.38□□□□□ -0.43
SNCA-204ENST00000394989 TMPPEQ6ZT21 453 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 C1orf198Q9H425 327 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 SEC61A2Q9H9S3 476 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 MTFP1Q9UDX5 166 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 GDF2Q9UK05 429 aaPredicted RBP12.38□□□□□ -0.43
SNCA-204ENST00000394989 PCDHGA5Q9Y5G8 931 aa12.38□□□□□ -0.43
SNCA-204ENST00000394989 NSG1A0A0A6YYJ2 146 aa12.37□□□□□ -0.43
SNCA-204ENST00000394989 SULT2B1O00204 365 aa12.37□□□□□ -0.43
SNCA-204ENST00000394989 ZIC3O60481 467 aa12.37□□□□□ -0.43
SNCA-204ENST00000394989 UBCP0CG48 685 aaKnown RBP12.37□□□□□ -0.43
SNCA-204ENST00000394989 LIFP15018 202 aa12.37□□□□□ -0.43
SNCA-204ENST00000394989 ZNF43P17038 809 aa12.37□□□□□ -0.43
SNCA-204ENST00000394989 ZP1P60852 638 aa12.37□□□□□ -0.43
SNCA-204ENST00000394989 CLVS2Q5SYC1 327 aa12.37□□□□□ -0.43
SNCA-204ENST00000394989 GLT8D1Q68CQ7 371 aa12.37□□□□□ -0.43
SNCA-204ENST00000394989 SEZ6L2Q6UXD5 910 aa12.37□□□□□ -0.43
SNCA-204ENST00000394989 OR4D10Q8NGI6 311 aa12.37□□□□□ -0.43
SNCA-204ENST00000394989 C15orf40Q8WUR7 153 aa12.37□□□□□ -0.43
SNCA-204ENST00000394989 TRAV18A0A075B6X5 111 aa12.37□□□□□ -0.43
SNCA-204ENST00000394989 LOC390937A0A1W2PQ73 354 aa12.37□□□□□ -0.43
SNCA-204ENST00000394989 GP1BAP07359 652 aa12.37□□□□□ -0.43
SNCA-204ENST00000394989 RGS19P49795 217 aa12.37□□□□□ -0.43
SNCA-204ENST00000394989 GPR85P60893 370 aa12.37□□□□□ -0.43
SNCA-204ENST00000394989 CLLU1Q5K131 121 aa12.37□□□□□ -0.43
SNCA-204ENST00000394989 TMEM244Q5VVB8 128 aa12.37□□□□□ -0.43
SNCA-204ENST00000394989 NARS2Q96I59 477 aaKnown RBP12.37□□□□□ -0.43
SNCA-204ENST00000394989 PBOV1Q9GZY1 135 aa12.37□□□□□ -0.43
SNCA-204ENST00000394989 IFT46Q9NQC8 304 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms