RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 PIK3C2BO00750 1634 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 HS3ST1O14792 307 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 MAT1AQ00266 395 aaKnown RBP12.32□□□□□ -0.44
USP49-203ENST00000394253 OR1L1Q8NH94 360 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 HPP00738 406 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 CPEB2Q7Z5Q1 589 aaKnown RBP12.32□□□□□ -0.44
USP49-203ENST00000394253 MFSD4AQ8N468 514 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 OR52N1Q8NH53 320 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 POM121L2Q96KW2 1035 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 PCYT2Q99447 389 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 PSENENQ9NZ42 101 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 FECHP22830 423 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 FIGLAQ6QHK4 219 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 PLPP7Q8NBV4 271 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 LRFN3Q9BTN0 628 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 LSM2Q9Y333 95 aaKnown RBP12.32□□□□□ -0.44
USP49-203ENST00000394253 A0A0J9YY10 115 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 TCRBV21S2A2A0A5A6 115 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 F5H697 171 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 MOGAT1Q96PD6 335 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 MANBALQ9NQG1 85 aa12.32□□□□□ -0.44
USP49-203ENST00000394253 TCN2P20062 427 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 SUCLG1P53597 346 aaKnown RBP12.31□□□□□ -0.44
USP49-203ENST00000394253 ZMAT3Q9HA38 289 aaKnown RBP12.31□□□□□ -0.44
USP49-203ENST00000394253 PPP1R3CQ9UQK1 317 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 SLIT2O94813 1529 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 CSO75390 466 aaKnown RBP12.31□□□□□ -0.44
USP49-203ENST00000394253 NDUFB7P17568 137 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 TRMT12Q53H54 448 aaKnown RBP12.31□□□□□ -0.44
USP49-203ENST00000394253 SLC38A9Q8NBW4 561 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 KLRB1Q12918 225 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 CADM3Q8N126 398 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 APIPQ96GX9 242 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 IL21Q9HBE4 155 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 FBLL1A6NHQ2 334 aaKnown RBP12.31□□□□□ -0.44
USP49-203ENST00000394253 TCF21O43680 179 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 OR10J1P30954 320 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 ACOT4Q8N9L9 421 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 MTMR14Q8NCE2 650 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 PACRGQ96M98 296 aaPredicted RBP12.31□□□□□ -0.44
USP49-203ENST00000394253 EPHA2P29317 976 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 FLT3LGP49771 235 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 GPR17Q13304 367 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 TMEM241Q24JQ0 296 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 ANGPTL5Q86XS5 388 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 RTP4Q96DX8 246 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 FKBP11Q9NYL4 201 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 SLC23A1Q9UHI7 598 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 NSG1A0A0A6YYJ2 146 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 CRHP06850 196 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 OR8G3PP0DMU2 310 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 CDC20Q12834 499 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 EDDM3AQ14507 147 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 YRDCQ86U90 279 aaKnown RBP12.31□□□□□ -0.44
USP49-203ENST00000394253 OR52I1Q8NGK6 324 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 PRO1933Q9H354 126 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 CLMPQ9H6B4 373 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 C5AR2Q9P296 337 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 CLDN34H7C241 214 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 IL5P05113 134 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 CPEP16870 476 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 FAM169BQ8N8A8 192 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 CSNK1G1Q9HCP0 422 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 DIMT1Q9UNQ2 313 aaKnown RBP12.31□□□□□ -0.44
USP49-203ENST00000394253 RGPD8O14715 1765 aaPredicted RBP12.31□□□□□ -0.44
USP49-203ENST00000394253 IGLON5A6NGN9 336 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 BCL3P20749 454 aa12.31□□□□□ -0.44
USP49-203ENST00000394253 TRBV4-1A0A0J9YWV2 114 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 GABRB1P18505 474 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 RPS23P62266 143 aaKnown RBP12.3□□□□□ -0.44
USP49-203ENST00000394253 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 LHFPL2Q6ZUX7 228 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 TMEM251Q8N6I4 163 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 C4orf32Q8N8J7 132 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 TMEM230Q96A57 120 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 APOBEC3GQ9HC16 384 aaKnown RBP12.3□□□□□ -0.44
USP49-203ENST00000394253 VNN1O95497 513 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 GLIS2Q9BZE0 524 aaPredicted RBP12.3□□□□□ -0.44
USP49-203ENST00000394253 HEMK1Q9Y5R4 338 aaPredicted RBP12.3□□□□□ -0.44
USP49-203ENST00000394253 GAGE10A6NGK3 116 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 B4DEV8 164 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 MS4A18H0YCH9 400 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 FPR3P25089 353 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 PIGPP57054 158 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 ZXDBP98169 803 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 MS4A18Q3C1V0 323 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 DACT2Q5SW24 774 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 ARFGAP1Q8N6T3 406 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 NUMBLQ9Y6R0 609 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 VASPP50552 380 aaPredicted RBP12.3□□□□□ -0.44
USP49-203ENST00000394253 RELBQ01201 579 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 PPP1R1CQ8WVI7 109 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 HGDQ93099 445 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 SLCO4A1Q96BD0 722 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 WDR83Q9BRX9 315 aaKnown RBP12.3□□□□□ -0.44
USP49-203ENST00000394253 VCX2Q9H322 139 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 MMP24Q9Y5R2 645 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 MST1RQ04912 1400 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 PLCE1Q9P212 2302 aa12.3□□□□□ -0.44
USP49-203ENST00000394253 SGK494L7N484 410 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms