RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 IGFBP3P17936 291 aaPredicted RBP16.74■□□□□ 0.27
CLDND1-203ENST00000394181 PITPNBP48739 271 aa16.74■□□□□ 0.27
CLDND1-203ENST00000394181 RIN1Q13671 783 aa16.74■□□□□ 0.27
CLDND1-203ENST00000394181 TMEM244Q5VVB8 128 aa16.74■□□□□ 0.27
CLDND1-203ENST00000394181 RHOUQ7L0Q8 258 aa16.74■□□□□ 0.27
CLDND1-203ENST00000394181 MINDY2Q8NBR6 621 aa16.74■□□□□ 0.27
CLDND1-203ENST00000394181 GJC3Q8NFK1 279 aa16.74■□□□□ 0.27
CLDND1-203ENST00000394181 WDYHV1Q96HA8 205 aa16.74■□□□□ 0.27
CLDND1-203ENST00000394181 KCNJ15Q99712 375 aa16.74■□□□□ 0.27
CLDND1-203ENST00000394181 SP140LQ9H930 580 aa16.74■□□□□ 0.27
CLDND1-203ENST00000394181 NUFIP1Q9UHK0 495 aaKnown RBP16.74■□□□□ 0.27
CLDND1-203ENST00000394181 MRPS7Q9Y2R9 242 aaKnown RBP16.74■□□□□ 0.27
CLDND1-203ENST00000394181 PTTG1O95997 202 aa16.74■□□□□ 0.27
CLDND1-203ENST00000394181 TALDO1P37837 337 aa16.74■□□□□ 0.27
CLDND1-203ENST00000394181 DEFA1P59665 94 aa16.74■□□□□ 0.27
CLDND1-203ENST00000394181 DEFA3P59666 94 aa16.74■□□□□ 0.27
CLDND1-203ENST00000394181 SCN1BQ07699 218 aa16.74■□□□□ 0.27
CLDND1-203ENST00000394181 BCL2A1Q16548 175 aa16.74■□□□□ 0.27
CLDND1-203ENST00000394181 CCBE1Q6UXH8 406 aaPredicted RBP16.74■□□□□ 0.27
CLDND1-203ENST00000394181 FAM57BQ71RH2 274 aa16.74■□□□□ 0.27
CLDND1-203ENST00000394181 ZNF283Q8N7M2 679 aa16.74■□□□□ 0.27
CLDND1-203ENST00000394181 CPT1CQ8TCG5 803 aa16.74■□□□□ 0.27
CLDND1-203ENST00000394181 ADAT3Q96EY9 351 aaPredicted RBP16.74■□□□□ 0.27
CLDND1-203ENST00000394181 WACQ9BTA9 647 aa16.74■□□□□ 0.27
CLDND1-203ENST00000394181 PRRG4Q9BZD6 226 aa16.74■□□□□ 0.27
CLDND1-203ENST00000394181 ACOT7O00154 380 aa16.73■□□□□ 0.27
CLDND1-203ENST00000394181 MRPL33O75394 65 aaKnown RBP16.73■□□□□ 0.27
CLDND1-203ENST00000394181 TGM6O95932 706 aa16.73■□□□□ 0.27
CLDND1-203ENST00000394181 ACTL6AO96019 429 aa16.73■□□□□ 0.27
CLDND1-203ENST00000394181 FOXG1P55316 489 aaPredicted RBP16.73■□□□□ 0.27
CLDND1-203ENST00000394181 SPOCK1Q08629 439 aa16.73■□□□□ 0.27
CLDND1-203ENST00000394181 PRSS45Q7RTY3 260 aa16.73■□□□□ 0.27
CLDND1-203ENST00000394181 LUZP2Q86TE4 346 aa16.73■□□□□ 0.27
CLDND1-203ENST00000394181 TMEM45BQ96B21 275 aa16.73■□□□□ 0.27
CLDND1-203ENST00000394181 C11orf54Q9H0W9 315 aaPredicted RBP16.73■□□□□ 0.27
CLDND1-203ENST00000394181 SLC7A10Q9NS82 523 aa16.73■□□□□ 0.27
CLDND1-203ENST00000394181 ZNF275Q9NSD4 429 aaPredicted RBP16.73■□□□□ 0.27
CLDND1-203ENST00000394181 MCTS1Q9ULC4 181 aaKnown RBP16.73■□□□□ 0.27
CLDND1-203ENST00000394181 SYT7O43581 403 aa16.72■□□□□ 0.27
CLDND1-203ENST00000394181 CD2P06729 351 aa16.72■□□□□ 0.27
CLDND1-203ENST00000394181 PTBP1P26599 531 aaKnown RBP eCLIP16.72■□□□□ 0.27
CLDND1-203ENST00000394181 NHLH1Q02575 133 aa16.72■□□□□ 0.27
CLDND1-203ENST00000394181 GFOD2Q3B7J2 385 aa16.72■□□□□ 0.27
CLDND1-203ENST00000394181 RNASE12Q5GAN4 147 aaKnown RBP16.72■□□□□ 0.27
CLDND1-203ENST00000394181 C9orf135Q5VTT2 229 aa16.72■□□□□ 0.27
CLDND1-203ENST00000394181 MTFR2Q6P444 385 aa16.72■□□□□ 0.27
CLDND1-203ENST00000394181 OR1J2Q8NGS2 313 aa16.72■□□□□ 0.27
CLDND1-203ENST00000394181 RHBDL2Q9NX52 303 aa16.72■□□□□ 0.27
CLDND1-203ENST00000394181 CGGBP1Q9UFW8 167 aaPredicted RBP16.72■□□□□ 0.27
CLDND1-203ENST00000394181 ATMQ13315 3056 aa16.72■□□□□ 0.27
CLDND1-203ENST00000394181 CEACAM4O75871 244 aa16.72■□□□□ 0.27
CLDND1-203ENST00000394181 TMIGD3P0DMS9 266 aaPredicted RBP16.72■□□□□ 0.27
CLDND1-203ENST00000394181 BCAP31P51572 246 aa16.72■□□□□ 0.27
CLDND1-203ENST00000394181 FOXC1Q12948 553 aa16.72■□□□□ 0.27
CLDND1-203ENST00000394181 UBE2NLQ5JXB2 153 aa16.72■□□□□ 0.27
CLDND1-203ENST00000394181 ELFN2Q5R3F8 820 aa16.72■□□□□ 0.27
CLDND1-203ENST00000394181 CELF2-AS1Q8N7Q2 184 aa16.72■□□□□ 0.27
CLDND1-203ENST00000394181 ZFP3Q96NJ6 502 aa16.72■□□□□ 0.27
CLDND1-203ENST00000394181 FOXB1Q99853 325 aa16.72■□□□□ 0.27
CLDND1-203ENST00000394181 NIPAL2Q9H841 368 aa16.72■□□□□ 0.27
CLDND1-203ENST00000394181 GPR84Q9NQS5 396 aa16.72■□□□□ 0.27
CLDND1-203ENST00000394181 PLEK2Q9NYT0 353 aa16.72■□□□□ 0.27
CLDND1-203ENST00000394181 CAMK2AQ9UQM7 478 aa16.72■□□□□ 0.27
CLDND1-203ENST00000394181 TFECO14948 347 aaPredicted RBP16.71■□□□□ 0.27
CLDND1-203ENST00000394181 GRB2P62993 217 aaKnown RBP16.71■□□□□ 0.27
CLDND1-203ENST00000394181 ZNF774Q6NX45 483 aa16.71■□□□□ 0.27
CLDND1-203ENST00000394181 SKA3Q8IX90 412 aa16.71■□□□□ 0.27
CLDND1-203ENST00000394181 SLC22A24Q8N4F4 322 aa16.71■□□□□ 0.27
CLDND1-203ENST00000394181 OR51D1Q8NGF3 324 aa16.71■□□□□ 0.27
CLDND1-203ENST00000394181 SLCO5A1Q9H2Y9 848 aa16.71■□□□□ 0.27
CLDND1-203ENST00000394181 FOXJ3Q9UPW0 622 aa16.71■□□□□ 0.27
CLDND1-203ENST00000394181 FREM1Q5H8C1 2179 aa16.71■□□□□ 0.27
CLDND1-203ENST00000394181 CTSSP25774 331 aa16.71■□□□□ 0.27
CLDND1-203ENST00000394181 EFNB2P52799 333 aa16.71■□□□□ 0.27
CLDND1-203ENST00000394181 ASAH1Q13510 395 aa16.71■□□□□ 0.27
CLDND1-203ENST00000394181 RIPPLY2Q5TAB7 128 aa16.71■□□□□ 0.27
CLDND1-203ENST00000394181 TRIQKQ629K1 86 aa16.71■□□□□ 0.27
CLDND1-203ENST00000394181 NUFIP2Q7Z417 695 aaKnown RBP16.71■□□□□ 0.27
CLDND1-203ENST00000394181 ABHD12BQ7Z5M8 362 aaPredicted RBP16.71■□□□□ 0.27
CLDND1-203ENST00000394181 CADM3Q8N126 398 aa16.71■□□□□ 0.27
CLDND1-203ENST00000394181 AKR7LQ8NHP1 331 aa16.71■□□□□ 0.27
CLDND1-203ENST00000394181 SYNPRQ8TBG9 265 aa16.71■□□□□ 0.27
CLDND1-203ENST00000394181 GCDHQ92947 438 aaPredicted RBP16.71■□□□□ 0.27
CLDND1-203ENST00000394181 FAM71F1Q96KD3 344 aaPredicted RBP16.71■□□□□ 0.27
CLDND1-203ENST00000394181 TBCCD1Q9NVR7 557 aa16.71■□□□□ 0.27
CLDND1-203ENST00000394181 CKLFQ9UBR5 152 aa16.71■□□□□ 0.27
CLDND1-203ENST00000394181 STEAP1Q9UHE8 339 aa16.71■□□□□ 0.27
CLDND1-203ENST00000394181 CEP295Q9C0D2 2601 aa16.71■□□□□ 0.26
CLDND1-203ENST00000394181 EEF1E1O43324 174 aaKnown RBP16.7■□□□□ 0.26
CLDND1-203ENST00000394181 KRT33AO76009 404 aa16.7■□□□□ 0.26
CLDND1-203ENST00000394181 HLA-DQB1P01920 261 aa16.7■□□□□ 0.26
CLDND1-203ENST00000394181 ABOP16442 354 aa16.7■□□□□ 0.26
CLDND1-203ENST00000394181 ZNF24P17028 368 aa16.7■□□□□ 0.26
CLDND1-203ENST00000394181 ZNF32P17041 273 aa16.7■□□□□ 0.26
CLDND1-203ENST00000394181 FSTP19883 344 aa16.7■□□□□ 0.26
CLDND1-203ENST00000394181 SLC6A9P48067 706 aa16.7■□□□□ 0.26
CLDND1-203ENST00000394181 RNF144BQ7Z419 303 aa16.7■□□□□ 0.26
CLDND1-203ENST00000394181 BIVMQ86UB2 503 aa16.7■□□□□ 0.26
CLDND1-203ENST00000394181 COMMD2Q86X83 199 aa16.7■□□□□ 0.26
CLDND1-203ENST00000394181 SETD6Q8TBK2 473 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms