RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 C1QTNF5Q9BXJ0 243 aa14.63□□□□□ -0.07
SNRPA1-202ENST00000394082 UNKLQ9H9P5 680 aaKnown RBP14.63□□□□□ -0.07
SNRPA1-202ENST00000394082 ZNF446Q9NWS9 450 aa14.63□□□□□ -0.07
SNRPA1-202ENST00000394082 PTTG3PQ9NZH4 202 aa14.63□□□□□ -0.07
SNRPA1-202ENST00000394082 RPS6KA6Q9UK32 745 aa14.63□□□□□ -0.07
SNRPA1-202ENST00000394082 FAM32AQ9Y421 112 aaKnown RBP14.63□□□□□ -0.07
SNRPA1-202ENST00000394082 MMP24Q9Y5R2 645 aa14.63□□□□□ -0.07
SNRPA1-202ENST00000394082 LHFPL6Q9Y693 200 aa14.63□□□□□ -0.07
SNRPA1-202ENST00000394082 MLNRO43193 412 aa14.62□□□□□ -0.07
SNRPA1-202ENST00000394082 IGHV4-38-2P0DP08 117 aa14.62□□□□□ -0.07
SNRPA1-202ENST00000394082 CDKN2AP42771 156 aaKnown RBP14.62□□□□□ -0.07
SNRPA1-202ENST00000394082 GSK3BP49841 420 aa14.62□□□□□ -0.07
SNRPA1-202ENST00000394082 SLC7A2P52569 658 aa14.62□□□□□ -0.07
SNRPA1-202ENST00000394082 FXYD6P3P58550 94 aa14.62□□□□□ -0.07
SNRPA1-202ENST00000394082 ECH1Q13011 328 aa14.62□□□□□ -0.07
SNRPA1-202ENST00000394082 OCLNQ16625 522 aa14.62□□□□□ -0.07
SNRPA1-202ENST00000394082 PTCHD4Q6ZW05 846 aa14.62□□□□□ -0.07
SNRPA1-202ENST00000394082 OR5AS1Q8N127 324 aa14.62□□□□□ -0.07
SNRPA1-202ENST00000394082 POU5F2Q8N7G0 328 aa14.62□□□□□ -0.07
SNRPA1-202ENST00000394082 OR10AD1Q8NGE0 317 aa14.62□□□□□ -0.07
SNRPA1-202ENST00000394082 ZNF420Q8TAQ5 688 aaPredicted RBP14.62□□□□□ -0.07
SNRPA1-202ENST00000394082 RSRC1Q96IZ7 334 aaKnown RBP14.62□□□□□ -0.07
SNRPA1-202ENST00000394082 DHRS1Q96LJ7 313 aa14.62□□□□□ -0.07
SNRPA1-202ENST00000394082 DUX5Q96PT3 197 aa14.62□□□□□ -0.07
SNRPA1-202ENST00000394082 TMEM246Q9BRR3 403 aa14.62□□□□□ -0.07
SNRPA1-202ENST00000394082 HCAR1Q9BXC0 346 aa14.62□□□□□ -0.07
SNRPA1-202ENST00000394082 CCDC134Q9H6E4 229 aa14.62□□□□□ -0.07
SNRPA1-202ENST00000394082 EFCAB1Q9HAE3 211 aa14.62□□□□□ -0.07
SNRPA1-202ENST00000394082 TMEM100Q9NV29 134 aa14.62□□□□□ -0.07
SNRPA1-202ENST00000394082 NDUFAF4Q9P032 175 aa14.62□□□□□ -0.07
SNRPA1-202ENST00000394082 ARMCX1Q9P291 453 aa14.62□□□□□ -0.07
SNRPA1-202ENST00000394082 GMPR2Q9P2T1 348 aaKnown RBP14.62□□□□□ -0.07
SNRPA1-202ENST00000394082 POLR1DQ9Y2S0 133 aa14.62□□□□□ -0.07
SNRPA1-202ENST00000394082 IER3IP1Q9Y5U9 82 aa14.62□□□□□ -0.07
SNRPA1-202ENST00000394082 DOCK11Q5JSL3 2073 aa14.62□□□□□ -0.07
SNRPA1-202ENST00000394082 IGLV1-36A0A0B4J1U3 117 aa14.61□□□□□ -0.07
SNRPA1-202ENST00000394082 A0A1B0GUS0 222 aa14.61□□□□□ -0.07
SNRPA1-202ENST00000394082 SOCS2O14508 198 aa14.61□□□□□ -0.07
SNRPA1-202ENST00000394082 PHYHO14832 338 aa14.61□□□□□ -0.07
SNRPA1-202ENST00000394082 ARPC3O15145 178 aa14.61□□□□□ -0.07
SNRPA1-202ENST00000394082 CYB5R3P00387 301 aaPredicted RBP14.61□□□□□ -0.07
SNRPA1-202ENST00000394082 COX4I1P13073 169 aa14.61□□□□□ -0.07
SNRPA1-202ENST00000394082 RBMXP38159 391 aaKnown RBP14.61□□□□□ -0.07
SNRPA1-202ENST00000394082 RSPO1Q2MKA7 263 aaPredicted RBP14.61□□□□□ -0.07
SNRPA1-202ENST00000394082 C16orf87Q6PH81 154 aa14.61□□□□□ -0.07
SNRPA1-202ENST00000394082 SMARCD3Q6STE5 483 aa14.61□□□□□ -0.07
SNRPA1-202ENST00000394082 DCDC5Q6ZRR9 648 aa14.61□□□□□ -0.07
SNRPA1-202ENST00000394082 OR8B3Q8NGG8 313 aa14.61□□□□□ -0.07
SNRPA1-202ENST00000394082 OR8B2Q96RD0 313 aa14.61□□□□□ -0.07
SNRPA1-202ENST00000394082 FUZQ9BT04 418 aa14.61□□□□□ -0.07
SNRPA1-202ENST00000394082 RERGLQ9H628 205 aa14.61□□□□□ -0.07
SNRPA1-202ENST00000394082 ABCD2Q9UBJ2 740 aa14.61□□□□□ -0.07
SNRPA1-202ENST00000394082 KCNAB3O43448 404 aa14.6□□□□□ -0.07
SNRPA1-202ENST00000394082 CCDC22O60826 627 aa14.6□□□□□ -0.07
SNRPA1-202ENST00000394082 PPP1R3DO95685 299 aa14.6□□□□□ -0.07
SNRPA1-202ENST00000394082 FPR3P25089 353 aa14.6□□□□□ -0.07
SNRPA1-202ENST00000394082 PITPNBP48739 271 aa14.6□□□□□ -0.07
SNRPA1-202ENST00000394082 NPY4RP50391 375 aa14.6□□□□□ -0.07
SNRPA1-202ENST00000394082 MOGAT3Q86VF5 341 aa14.6□□□□□ -0.07
SNRPA1-202ENST00000394082 FITM2Q8N6M3 262 aa14.6□□□□□ -0.07
SNRPA1-202ENST00000394082 SLC26A10Q8NG04 563 aa14.6□□□□□ -0.07
SNRPA1-202ENST00000394082 FAM162AQ96A26 154 aa14.6□□□□□ -0.07
SNRPA1-202ENST00000394082 C7orf34Q96L11 122 aa14.6□□□□□ -0.07
SNRPA1-202ENST00000394082 SLC22A4Q9H015 551 aa14.6□□□□□ -0.07
SNRPA1-202ENST00000394082 CLN8Q9UBY8 286 aa14.6□□□□□ -0.07
SNRPA1-202ENST00000394082 B9D1Q9UPM9 204 aa14.6□□□□□ -0.07
SNRPA1-202ENST00000394082 AURKCQ9UQB9 309 aa14.6□□□□□ -0.07
SNRPA1-202ENST00000394082 NOP16Q9Y3C1 178 aaKnown RBP14.6□□□□□ -0.07
SNRPA1-202ENST00000394082 UNC119BA6NIH7 251 aa14.59□□□□□ -0.07
SNRPA1-202ENST00000394082 F5H5P2 479 aa14.59□□□□□ -0.07
SNRPA1-202ENST00000394082 H0YL77 283 aa14.59□□□□□ -0.07
SNRPA1-202ENST00000394082 DCTN6O00399 190 aa14.59□□□□□ -0.07
SNRPA1-202ENST00000394082 ACSM4P0C7M7 580 aa14.59□□□□□ -0.07
SNRPA1-202ENST00000394082 IRF2P14316 349 aa14.59□□□□□ -0.07
SNRPA1-202ENST00000394082 PSMB10P40306 273 aa14.59□□□□□ -0.07
SNRPA1-202ENST00000394082 MDH1P40925 334 aaKnown RBP14.59□□□□□ -0.07
SNRPA1-202ENST00000394082 PMELP40967 661 aa14.59□□□□□ -0.07
SNRPA1-202ENST00000394082 CD200P41217 278 aa14.59□□□□□ -0.07
SNRPA1-202ENST00000394082 MAB21L1Q13394 359 aa14.59□□□□□ -0.07
SNRPA1-202ENST00000394082 SLC36A3Q495N2 470 aa14.59□□□□□ -0.07
SNRPA1-202ENST00000394082 FGD3Q5JSP0 725 aa14.59□□□□□ -0.07
SNRPA1-202ENST00000394082 ZNF362Q5T0B9 420 aaPredicted RBP14.59□□□□□ -0.07
SNRPA1-202ENST00000394082 OTPQ5XKR4 325 aa14.59□□□□□ -0.07
SNRPA1-202ENST00000394082 SLC18B1Q6NT16 456 aa14.59□□□□□ -0.07
SNRPA1-202ENST00000394082 TREML4Q6UXN2 200 aa14.59□□□□□ -0.07
SNRPA1-202ENST00000394082 ZBTB46Q86UZ6 589 aa14.59□□□□□ -0.07
SNRPA1-202ENST00000394082 OR6V1Q8N148 313 aa14.59□□□□□ -0.07
SNRPA1-202ENST00000394082 PLPP7Q8NBV4 271 aa14.59□□□□□ -0.07
SNRPA1-202ENST00000394082 KCTD14Q9BQ13 255 aaPredicted RBP14.59□□□□□ -0.07
SNRPA1-202ENST00000394082 NUDT16L1Q9BRJ7 211 aaKnown RBP14.59□□□□□ -0.07
SNRPA1-202ENST00000394082 NOX4Q9NPH5 578 aa14.59□□□□□ -0.07
SNRPA1-202ENST00000394082 MED4Q9NPJ6 270 aa14.59□□□□□ -0.07
SNRPA1-202ENST00000394082 DCAF13Q9NV06 445 aaKnown RBP14.59□□□□□ -0.07
SNRPA1-202ENST00000394082 SAMD4AQ9UPU9 718 aaKnown RBP14.59□□□□□ -0.07
SNRPA1-202ENST00000394082 TRAV40A0A0B4J280 105 aa14.58□□□□□ -0.08
SNRPA1-202ENST00000394082 TRBV4-1A0A0J9YWV2 114 aa14.58□□□□□ -0.08
SNRPA1-202ENST00000394082 IDH3BO43837 385 aa14.58□□□□□ -0.08
SNRPA1-202ENST00000394082 PTBP3O95758 552 aaKnown RBP14.58□□□□□ -0.08
SNRPA1-202ENST00000394082 LIPFP07098 398 aa14.58□□□□□ -0.08
SNRPA1-202ENST00000394082 RAD23AP54725 363 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms