RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 ABHD6Q9BV23 337 aa16.26■□□□□ 0.19
PDLIM7-204ENST00000393546 C1QTNF5Q9BXJ0 243 aa16.26■□□□□ 0.19
PDLIM7-204ENST00000393546 TPK1Q9H3S4 243 aa16.26■□□□□ 0.19
PDLIM7-204ENST00000393546 VPS13CQ709C8 3753 aa16.26■□□□□ 0.19
PDLIM7-204ENST00000393546 HIVEP1P15822 2718 aa16.25■□□□□ 0.19
PDLIM7-204ENST00000393546 M0R135 149 aa16.25■□□□□ 0.19
PDLIM7-204ENST00000393546 NAT2P11245 290 aa16.25■□□□□ 0.19
PDLIM7-204ENST00000393546 ANPEPP15144 967 aa16.25■□□□□ 0.19
PDLIM7-204ENST00000393546 LIPAP38571 399 aa16.25■□□□□ 0.19
PDLIM7-204ENST00000393546 NAA10P41227 235 aaPredicted RBP16.25■□□□□ 0.19
PDLIM7-204ENST00000393546 TNK1Q13470 666 aa16.25■□□□□ 0.19
PDLIM7-204ENST00000393546 COLCA1Q6ZS62 124 aa16.25■□□□□ 0.19
PDLIM7-204ENST00000393546 SPATC1Q76KD6 591 aa16.25■□□□□ 0.19
PDLIM7-204ENST00000393546 SLC16A9Q7RTY1 509 aa16.25■□□□□ 0.19
PDLIM7-204ENST00000393546 BCDIN3DQ7Z5W3 292 aaKnown RBP16.25■□□□□ 0.19
PDLIM7-204ENST00000393546 NAA40Q86UY6 237 aa16.25■□□□□ 0.19
PDLIM7-204ENST00000393546 GID4Q8IVV7 300 aa16.25■□□□□ 0.19
PDLIM7-204ENST00000393546 OR8J1Q8NGP2 316 aa16.25■□□□□ 0.19
PDLIM7-204ENST00000393546 OTOSQ8NHW6 89 aa16.25■□□□□ 0.19
PDLIM7-204ENST00000393546 THEM6Q8WUY1 208 aa16.25■□□□□ 0.19
PDLIM7-204ENST00000393546 CMBLQ96DG6 245 aa16.25■□□□□ 0.19
PDLIM7-204ENST00000393546 ZNF799Q96GE5 643 aa16.25■□□□□ 0.19
PDLIM7-204ENST00000393546 KCNJ15Q99712 375 aa16.25■□□□□ 0.19
PDLIM7-204ENST00000393546 YIPF3Q9GZM5 350 aa16.25■□□□□ 0.19
PDLIM7-204ENST00000393546 POFUT1Q9H488 388 aa16.25■□□□□ 0.19
PDLIM7-204ENST00000393546 TOR3AQ9H497 397 aa16.25■□□□□ 0.19
PDLIM7-204ENST00000393546 CYSLTR2Q9NS75 346 aa16.25■□□□□ 0.19
PDLIM7-204ENST00000393546 PTTG3PQ9NZH4 202 aa16.25■□□□□ 0.19
PDLIM7-204ENST00000393546 F8P00451 2351 aa16.24■□□□□ 0.19
PDLIM7-204ENST00000393546 PLSCR5A0PG75 271 aa16.24■□□□□ 0.19
PDLIM7-204ENST00000393546 CCDC182A6NF36 153 aa16.24■□□□□ 0.19
PDLIM7-204ENST00000393546 TRIM64A6NGJ6 449 aa16.24■□□□□ 0.19
PDLIM7-204ENST00000393546 TRIM64BA6NI03 449 aa16.24■□□□□ 0.19
PDLIM7-204ENST00000393546 SLC22A31A6NKX4 558 aa16.24■□□□□ 0.19
PDLIM7-204ENST00000393546 C17orf100A8MU93 164 aa16.24■□□□□ 0.19
PDLIM7-204ENST00000393546 TIMM8AO60220 97 aaPredicted RBP16.24■□□□□ 0.19
PDLIM7-204ENST00000393546 LY6HO94772 140 aa16.24■□□□□ 0.19
PDLIM7-204ENST00000393546 LYNP07948 512 aa16.24■□□□□ 0.19
PDLIM7-204ENST00000393546 CSF3P09919 207 aa16.24■□□□□ 0.19
PDLIM7-204ENST00000393546 RAC2P15153 192 aa16.24■□□□□ 0.19
PDLIM7-204ENST00000393546 OTX1P32242 354 aaPredicted RBP16.24■□□□□ 0.19
PDLIM7-204ENST00000393546 SLC6A9P48067 706 aa16.24■□□□□ 0.19
PDLIM7-204ENST00000393546 PDLIM4P50479 330 aa16.24■□□□□ 0.19
PDLIM7-204ENST00000393546 PRKXP51817 358 aa16.24■□□□□ 0.19
PDLIM7-204ENST00000393546 GRB2P62993 217 aaKnown RBP16.24■□□□□ 0.19
PDLIM7-204ENST00000393546 MALLQ13021 153 aa16.24■□□□□ 0.19
PDLIM7-204ENST00000393546 PSG7Q13046 419 aa16.24■□□□□ 0.19
PDLIM7-204ENST00000393546 RCN1Q15293 331 aa16.24■□□□□ 0.19
PDLIM7-204ENST00000393546 DRAM2Q6UX65 266 aa16.24■□□□□ 0.19
PDLIM7-204ENST00000393546 DNM1P46Q6ZS02 220 aa16.24■□□□□ 0.19
PDLIM7-204ENST00000393546 RHOUQ7L0Q8 258 aa16.24■□□□□ 0.19
PDLIM7-204ENST00000393546 ZNF525Q8N782 197 aa16.24■□□□□ 0.19
PDLIM7-204ENST00000393546 RNF133Q8WVZ7 376 aa16.24■□□□□ 0.19
PDLIM7-204ENST00000393546 TRUB1Q8WWH5 349 aaKnown RBP16.24■□□□□ 0.19
PDLIM7-204ENST00000393546 HAVCR1Q96D42 359 aa16.24■□□□□ 0.19
PDLIM7-204ENST00000393546 HRASLS5Q96KN8 279 aa16.24■□□□□ 0.19
PDLIM7-204ENST00000393546 MYOZ1Q9NP98 299 aaPredicted RBP16.24■□□□□ 0.19
PDLIM7-204ENST00000393546 IMPAD1Q9NX62 359 aa16.24■□□□□ 0.19
PDLIM7-204ENST00000393546 CGGBP1Q9UFW8 167 aaPredicted RBP16.24■□□□□ 0.19
PDLIM7-204ENST00000393546 LAMP5Q9UJQ1 280 aa16.24■□□□□ 0.19
PDLIM7-204ENST00000393546 CELSR1Q9NYQ6 3014 aa16.24■□□□□ 0.19
PDLIM7-204ENST00000393546 MED13LQ71F56 2210 aa16.23■□□□□ 0.19
PDLIM7-204ENST00000393546 APOC1P02654 83 aa16.23■□□□□ 0.19
PDLIM7-204ENST00000393546 FOSL1P15407 271 aa16.23■□□□□ 0.19
PDLIM7-204ENST00000393546 KITLGP21583 273 aa16.23■□□□□ 0.19
PDLIM7-204ENST00000393546 HSD11B1P28845 292 aa16.23■□□□□ 0.19
PDLIM7-204ENST00000393546 ZNF81P51508 661 aa16.23■□□□□ 0.19
PDLIM7-204ENST00000393546 PCGF3Q3KNV8 242 aa16.23■□□□□ 0.19
PDLIM7-204ENST00000393546 FBXW12Q6X9E4 464 aa16.23■□□□□ 0.19
PDLIM7-204ENST00000393546 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.23■□□□□ 0.19
PDLIM7-204ENST00000393546 ZNF283Q8N7M2 679 aa16.23■□□□□ 0.19
PDLIM7-204ENST00000393546 FAM81AQ8TBF8 368 aa16.23■□□□□ 0.19
PDLIM7-204ENST00000393546 UBASH3BQ8TF42 649 aa16.23■□□□□ 0.19
PDLIM7-204ENST00000393546 FAM168AQ92567 244 aa16.23■□□□□ 0.19
PDLIM7-204ENST00000393546 PURGQ9UJV8 347 aaKnown RBP16.23■□□□□ 0.19
PDLIM7-204ENST00000393546 H7C1Q1 480 aa16.22■□□□□ 0.19
PDLIM7-204ENST00000393546 MRPL3P09001 348 aaKnown RBP16.22■□□□□ 0.19
PDLIM7-204ENST00000393546 H2BFMP0C1H6 154 aa16.22■□□□□ 0.19
PDLIM7-204ENST00000393546 DAOP14920 347 aa16.22■□□□□ 0.19
PDLIM7-204ENST00000393546 ALOX5APP20292 161 aa16.22■□□□□ 0.19
PDLIM7-204ENST00000393546 MMP15P51511 669 aa16.22■□□□□ 0.19
PDLIM7-204ENST00000393546 TRIP10Q15642 601 aa16.22■□□□□ 0.19
PDLIM7-204ENST00000393546 CARTPTQ16568 116 aa16.22■□□□□ 0.19
PDLIM7-204ENST00000393546 C18orf12Q96KH6 178 aa16.22■□□□□ 0.19
PDLIM7-204ENST00000393546 MBOAT4Q96T53 435 aa16.22■□□□□ 0.19
PDLIM7-204ENST00000393546 AMELYQ99218 206 aa16.22■□□□□ 0.19
PDLIM7-204ENST00000393546 CNN2Q99439 309 aaKnown RBP16.22■□□□□ 0.19
PDLIM7-204ENST00000393546 SP140LQ9H930 580 aa16.22■□□□□ 0.19
PDLIM7-204ENST00000393546 HAO2Q9NYQ3 351 aa16.22■□□□□ 0.19
PDLIM7-204ENST00000393546 NKIRAS2Q9NYR9 191 aa16.22■□□□□ 0.19
PDLIM7-204ENST00000393546 WARS2Q9UGM6 360 aaKnown RBP16.22■□□□□ 0.19
PDLIM7-204ENST00000393546 GMPPBQ9Y5P6 360 aa16.22■□□□□ 0.19
PDLIM7-204ENST00000393546 TMEM14AQ9Y6G1 99 aa16.22■□□□□ 0.19
PDLIM7-204ENST00000393546 LOC390937A0A1W2PQ73 354 aa16.21■□□□□ 0.19
PDLIM7-204ENST00000393546 E9PQ18 207 aa16.21■□□□□ 0.19
PDLIM7-204ENST00000393546 OPRL1P41146 370 aa16.21■□□□□ 0.19
PDLIM7-204ENST00000393546 HCCSP53701 268 aa16.21■□□□□ 0.19
PDLIM7-204ENST00000393546 ELF3P78545 371 aaPredicted RBP16.21■□□□□ 0.19
PDLIM7-204ENST00000393546 GGTLC2Q14390 218 aa16.21■□□□□ 0.19
PDLIM7-204ENST00000393546 HLXQ14774 488 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms