RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 KRT35Q92764 455 aa-0.68□□□□□ -2.52
RNU6-239P-201ENST00000390990 RBPMSQ93062 196 aaKnown RBP-0.68□□□□□ -2.52
RNU6-239P-201ENST00000390990 TTC25Q96NG3 672 aa-0.68□□□□□ -2.52
RNU6-239P-201ENST00000390990 SERPINB12Q96P63 405 aa-0.68□□□□□ -2.52
RNU6-239P-201ENST00000390990 FICDQ9BVA6 458 aa-0.68□□□□□ -2.52
RNU6-239P-201ENST00000390990 C2orf40Q9H1Z8 148 aa-0.68□□□□□ -2.52
RNU6-239P-201ENST00000390990 BFARQ9NZS9 450 aa-0.68□□□□□ -2.52
RNU6-239P-201ENST00000390990 NCAPD2Q15021 1401 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 A0A1B0GU33 70 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 IZUMO1RA6ND01 250 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 TRIM64A6NGJ6 449 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 ERICH4A6NGS2 130 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 TRIM64BA6NI03 449 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 KNCNA6PVL3 124 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 SLC31A1O15431 190 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 POLR2DO15514 142 aaKnown RBP-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 FCMRO60667 390 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 SLC19A2O60779 497 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 ENTPD6O75354 484 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 BCAS2O75934 225 aaPredicted RBP-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 IGHV3-53P01767 116 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 GPX1P07203 203 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 KRTAP2-3P0C7H8 128 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 HOXB8P17481 243 aaPredicted RBP-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 PRKACBP22694 351 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 CCR1P32246 355 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 POLR2IP36954 125 aaKnown RBP-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 TWF1Q12792 350 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 PNOCQ13519 176 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 DGCR6Q14129 220 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 CST6Q15828 149 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 SPATA8Q6RVD6 105 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 DHDDSQ86SQ9 333 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 CDR2LQ86X02 465 aaPredicted RBP-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 MSRB3Q8IXL7 192 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 ELMOD2Q8IZ81 293 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 C2orf73Q8N5S3 287 aaPredicted RBP-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 Q8NAQ8 132 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 OR1L1Q8NH94 360 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 TBRG4Q969Z0 631 aaKnown RBP eCLIP-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 RAD51AP1Q96B01 352 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 SH3GL1Q99961 368 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 KRTAP2-4Q9BYR9 128 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 KRTAP2-1Q9BYU5 128 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 MFFQ9GZY8 342 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 LRRC19Q9H756 370 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 ELOVL3Q9HB03 270 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 INIPQ9NRY2 104 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 SPASTQ9UBP0 616 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 SLC7A8Q9UHI5 535 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 CHMP2BQ9UQN3 213 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 NPTNQ9Y639 398 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 U3KQK5 164 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 OTOFQ9HC10 1997 aa-0.69□□□□□ -2.52
RNU6-239P-201ENST00000390990 ZFC3H1O60293 1989 aaKnown RBP-0.7□□□□□ -2.52
RNU6-239P-201ENST00000390990 FN1P02751 2386 aaKnown RBP-0.7□□□□□ -2.52
RNU6-239P-201ENST00000390990 A8MWL6 223 aa-0.7□□□□□ -2.52
RNU6-239P-201ENST00000390990 TNFRSF11BO00300 401 aa-0.7□□□□□ -2.52
RNU6-239P-201ENST00000390990 CHADO15335 359 aa-0.7□□□□□ -2.52
RNU6-239P-201ENST00000390990 RDH16O75452 317 aa-0.7□□□□□ -2.52
RNU6-239P-201ENST00000390990 GATBO75879 557 aaKnown RBP-0.7□□□□□ -2.52
RNU6-239P-201ENST00000390990 SCO1O75880 301 aa-0.7□□□□□ -2.52
RNU6-239P-201ENST00000390990 ERLIN2O94905 339 aa-0.7□□□□□ -2.52
RNU6-239P-201ENST00000390990 PABPC4LP0CB38 370 aaKnown RBP-0.7□□□□□ -2.52
RNU6-239P-201ENST00000390990 CCDC192P0DO97 292 aa-0.7□□□□□ -2.52
RNU6-239P-201ENST00000390990 MPIP34949 423 aa-0.7□□□□□ -2.52
RNU6-239P-201ENST00000390990 HSD17B2P37059 387 aa-0.7□□□□□ -2.52
RNU6-239P-201ENST00000390990 YAP1P46937 504 aaKnown RBP-0.7□□□□□ -2.52
RNU6-239P-201ENST00000390990 DEFB115Q30KQ5 88 aa-0.7□□□□□ -2.52
RNU6-239P-201ENST00000390990 C9orf135Q5VTT2 229 aa-0.7□□□□□ -2.52
RNU6-239P-201ENST00000390990 FAM104BQ5XKR9 115 aa-0.7□□□□□ -2.52
RNU6-239P-201ENST00000390990 PYHIN1Q6K0P9 492 aa-0.7□□□□□ -2.52
RNU6-239P-201ENST00000390990 CCDC80Q76M96 950 aa-0.7□□□□□ -2.52
RNU6-239P-201ENST00000390990 CDH26Q8IXH8 852 aa-0.7□□□□□ -2.52
RNU6-239P-201ENST00000390990 ZFP62Q8NB50 900 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-239P-201ENST00000390990 C11orf72Q8NBR9 251 aa-0.7□□□□□ -2.52
RNU6-239P-201ENST00000390990 OR4D6Q8NGJ1 314 aa-0.7□□□□□ -2.52
RNU6-239P-201ENST00000390990 LRRC29Q8WV35 223 aa-0.7□□□□□ -2.52
RNU6-239P-201ENST00000390990 GHSRQ92847 366 aa-0.7□□□□□ -2.52
RNU6-239P-201ENST00000390990 YIPF5Q969M3 257 aa-0.7□□□□□ -2.52
RNU6-239P-201ENST00000390990 DCPSQ96C86 337 aaKnown RBP-0.7□□□□□ -2.52
RNU6-239P-201ENST00000390990 C14orf79Q96F83 325 aa-0.7□□□□□ -2.52
RNU6-239P-201ENST00000390990 LRRN3Q9H3W5 708 aa-0.7□□□□□ -2.52
RNU6-239P-201ENST00000390990 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP-0.7□□□□□ -2.52
RNU6-239P-201ENST00000390990 SH3BGRL2Q9UJC5 107 aa-0.7□□□□□ -2.52
RNU6-239P-201ENST00000390990 ZNF443Q9Y2A4 671 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-239P-201ENST00000390990 LRRC42Q9Y546 428 aa-0.7□□□□□ -2.52
RNU6-239P-201ENST00000390990 DENND4AQ7Z401 1863 aa-0.7□□□□□ -2.52
RNU6-239P-201ENST00000390990 BRCA1P38398 1863 aaKnown RBP-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 PXDNLA1KZ92 1463 aa-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 TECTAO75443 2155 aa-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 SMIM26A0A096LP01 95 aa-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 MFN2O95140 757 aa-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 TGFAP01135 160 aa-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 MT-ND4P03905 459 aa-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 C2P06681 752 aa-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 OR5AC1P0C628 307 aa-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 FBXW4P57775 412 aa-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 PRR3P79522 188 aaKnown RBP-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 PSG4Q00888 419 aa-0.71□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms