RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 GCM1Q9NP62 436 aa11.47□□□□□ -0.57
TRBV4-1-201ENST00000390357 IL20Q9NYY1 176 aa11.47□□□□□ -0.57
TRBV4-1-201ENST00000390357 ACTR3BQ9P1U1 418 aa11.47□□□□□ -0.57
TRBV4-1-201ENST00000390357 CYB5R1Q9UHQ9 305 aa11.47□□□□□ -0.57
TRBV4-1-201ENST00000390357 WNK2Q9Y3S1 2297 aa11.46□□□□□ -0.57
TRBV4-1-201ENST00000390357 LOC105371242A0A075B767 164 aa11.46□□□□□ -0.57
TRBV4-1-201ENST00000390357 A0A1B0GWJ7 208 aa11.46□□□□□ -0.57
TRBV4-1-201ENST00000390357 A8MXK9 166 aa11.46□□□□□ -0.57
TRBV4-1-201ENST00000390357 TMEM178BH3BS89 294 aa11.46□□□□□ -0.57
TRBV4-1-201ENST00000390357 DCTN6O00399 190 aa11.46□□□□□ -0.57
TRBV4-1-201ENST00000390357 ARPC2O15144 300 aa11.46□□□□□ -0.57
TRBV4-1-201ENST00000390357 HLA-DQA2P01906 255 aa11.46□□□□□ -0.57
TRBV4-1-201ENST00000390357 DBHP09172 617 aa11.46□□□□□ -0.57
TRBV4-1-201ENST00000390357 COMPP49747 757 aaPredicted RBP11.46□□□□□ -0.57
TRBV4-1-201ENST00000390357 BLVRAP53004 296 aa11.46□□□□□ -0.57
TRBV4-1-201ENST00000390357 TPTEP56180 551 aa11.46□□□□□ -0.57
TRBV4-1-201ENST00000390357 SRSF2Q01130 221 aaKnown RBP11.46□□□□□ -0.57
TRBV4-1-201ENST00000390357 GK3PQ14409 553 aa11.46□□□□□ -0.57
TRBV4-1-201ENST00000390357 KRTAP27-1Q3LI81 207 aa11.46□□□□□ -0.57
TRBV4-1-201ENST00000390357 SLC18B1Q6NT16 456 aa11.46□□□□□ -0.57
TRBV4-1-201ENST00000390357 DEFB107AQ8IZN7 70 aa11.46□□□□□ -0.57
TRBV4-1-201ENST00000390357 OR52E2Q8NGJ4 325 aa11.46□□□□□ -0.57
TRBV4-1-201ENST00000390357 OR2T4Q8NH00 348 aa11.46□□□□□ -0.57
TRBV4-1-201ENST00000390357 SLC7A6Q92536 515 aa11.46□□□□□ -0.57
TRBV4-1-201ENST00000390357 SPTSSAQ969W0 71 aa11.46□□□□□ -0.57
TRBV4-1-201ENST00000390357 PLEKHA8Q96JA3 519 aa11.46□□□□□ -0.57
TRBV4-1-201ENST00000390357 TSSK2Q96PF2 358 aa11.46□□□□□ -0.57
TRBV4-1-201ENST00000390357 ATF6BQ99941 703 aa11.46□□□□□ -0.57
TRBV4-1-201ENST00000390357 MRI1Q9BV20 369 aa11.46□□□□□ -0.57
TRBV4-1-201ENST00000390357 POFUT1Q9H488 388 aa11.46□□□□□ -0.57
TRBV4-1-201ENST00000390357 RPRD1BQ9NQG5 326 aaKnown RBP11.46□□□□□ -0.57
TRBV4-1-201ENST00000390357 PTTG3PQ9NZH4 202 aa11.46□□□□□ -0.57
TRBV4-1-201ENST00000390357 MIOXQ9UGB7 285 aa11.46□□□□□ -0.57
TRBV4-1-201ENST00000390357 BAIAP2Q9UQB8 552 aa11.46□□□□□ -0.57
TRBV4-1-201ENST00000390357 LRCH1Q9Y2L9 728 aa11.46□□□□□ -0.57
TRBV4-1-201ENST00000390357 STAB1Q9NY15 2570 aa11.45□□□□□ -0.58
TRBV4-1-201ENST00000390357 FBN3Q75N90 2809 aa11.45□□□□□ -0.58
TRBV4-1-201ENST00000390357 OR6C68A6NDL8 312 aa11.45□□□□□ -0.58
TRBV4-1-201ENST00000390357 TNFRSF11BO00300 401 aa11.45□□□□□ -0.58
TRBV4-1-201ENST00000390357 WNT2P09544 360 aa11.45□□□□□ -0.58
TRBV4-1-201ENST00000390357 ACSM4P0C7M7 580 aa11.45□□□□□ -0.58
TRBV4-1-201ENST00000390357 PPIAL4GP0DN37 164 aa11.45□□□□□ -0.58
TRBV4-1-201ENST00000390357 GNGT1P63211 74 aa11.45□□□□□ -0.58
TRBV4-1-201ENST00000390357 LCN2P80188 198 aa11.45□□□□□ -0.58
TRBV4-1-201ENST00000390357 RSPO1Q2MKA7 263 aaPredicted RBP11.45□□□□□ -0.58
TRBV4-1-201ENST00000390357 ESCO2Q56NI9 601 aa11.45□□□□□ -0.58
TRBV4-1-201ENST00000390357 SPRNQ5BIV9 151 aa11.45□□□□□ -0.58
TRBV4-1-201ENST00000390357 OR2T2Q6IF00 324 aa11.45□□□□□ -0.58
TRBV4-1-201ENST00000390357 RBMS3Q6XE24 437 aaKnown RBP11.45□□□□□ -0.58
TRBV4-1-201ENST00000390357 ZNF620Q6ZNG0 422 aa11.45□□□□□ -0.58
TRBV4-1-201ENST00000390357 RASSF6Q6ZTQ3 369 aa11.45□□□□□ -0.58
TRBV4-1-201ENST00000390357 BPIFB2Q8N4F0 458 aa11.45□□□□□ -0.58
TRBV4-1-201ENST00000390357 OR4C15Q8NGM1 316 aa11.45□□□□□ -0.58
TRBV4-1-201ENST00000390357 MEGF10Q96KG7 1140 aa11.45□□□□□ -0.58
TRBV4-1-201ENST00000390357 SIGLEC11Q96RL6 698 aa11.45□□□□□ -0.58
TRBV4-1-201ENST00000390357 MAGIXQ9H6Y5 334 aa11.45□□□□□ -0.58
TRBV4-1-201ENST00000390357 V9GYQ6 96 aa11.45□□□□□ -0.58
TRBV4-1-201ENST00000390357 DOCK11Q5JSL3 2073 aa11.45□□□□□ -0.58
TRBV4-1-201ENST00000390357 TMEM89A2RUT3 159 aa11.44□□□□□ -0.58
TRBV4-1-201ENST00000390357 F5H0A9 414 aaPredicted RBP11.44□□□□□ -0.58
TRBV4-1-201ENST00000390357 F5H5K5 113 aa11.44□□□□□ -0.58
TRBV4-1-201ENST00000390357 LCATP04180 440 aa11.44□□□□□ -0.58
TRBV4-1-201ENST00000390357 IRF2P14316 349 aa11.44□□□□□ -0.58
TRBV4-1-201ENST00000390357 ZNF12P17014 697 aa11.44□□□□□ -0.58
TRBV4-1-201ENST00000390357 HOXB6P17509 224 aaKnown RBP11.44□□□□□ -0.58
TRBV4-1-201ENST00000390357 MSX2P35548 267 aaPredicted RBP11.44□□□□□ -0.58
TRBV4-1-201ENST00000390357 GGT2P36268 569 aa11.44□□□□□ -0.58
TRBV4-1-201ENST00000390357 GATA4P43694 442 aa11.44□□□□□ -0.58
TRBV4-1-201ENST00000390357 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.44□□□□□ -0.58
TRBV4-1-201ENST00000390357 ZNF154Q13106 437 aa11.44□□□□□ -0.58
TRBV4-1-201ENST00000390357 HLXQ14774 488 aaPredicted RBP11.44□□□□□ -0.58
TRBV4-1-201ENST00000390357 MEP1BQ16820 701 aa11.44□□□□□ -0.58
TRBV4-1-201ENST00000390357 PGBD2Q6P3X8 592 aa11.44□□□□□ -0.58
TRBV4-1-201ENST00000390357 CORO6Q6QEF8 472 aa11.44□□□□□ -0.58
TRBV4-1-201ENST00000390357 LRRN1Q6UXK5 716 aa11.44□□□□□ -0.58
TRBV4-1-201ENST00000390357 PGAP1Q75T13 922 aa11.44□□□□□ -0.58
TRBV4-1-201ENST00000390357 OR5AS1Q8N127 324 aa11.44□□□□□ -0.58
TRBV4-1-201ENST00000390357 PLPP7Q8NBV4 271 aa11.44□□□□□ -0.58
TRBV4-1-201ENST00000390357 NSL1Q96IY1 281 aa11.44□□□□□ -0.58
TRBV4-1-201ENST00000390357 DDOQ99489 341 aa11.44□□□□□ -0.58
TRBV4-1-201ENST00000390357 TMEM165Q9HC07 324 aa11.44□□□□□ -0.58
TRBV4-1-201ENST00000390357 DDX28Q9NUL7 540 aaKnown RBP11.44□□□□□ -0.58
TRBV4-1-201ENST00000390357 ARL8BQ9NVJ2 186 aa11.44□□□□□ -0.58
TRBV4-1-201ENST00000390357 OPN4Q9UHM6 478 aa11.44□□□□□ -0.58
TRBV4-1-201ENST00000390357 NUP50Q9UKX7 468 aa11.44□□□□□ -0.58
TRBV4-1-201ENST00000390357 INSIG2Q9Y5U4 225 aa11.44□□□□□ -0.58
TRBV4-1-201ENST00000390357 LYVE1Q9Y5Y7 322 aa11.44□□□□□ -0.58
TRBV4-1-201ENST00000390357 AUP1Q9Y679 476 aa11.44□□□□□ -0.58
TRBV4-1-201ENST00000390357 CDH10Q9Y6N8 788 aa11.44□□□□□ -0.58
TRBV4-1-201ENST00000390357 B2RBV5 119 aa11.43□□□□□ -0.58
TRBV4-1-201ENST00000390357 BHLHE40O14503 412 aa11.43□□□□□ -0.58
TRBV4-1-201ENST00000390357 GMDSO60547 372 aa11.43□□□□□ -0.58
TRBV4-1-201ENST00000390357 CCNB2O95067 398 aa11.43□□□□□ -0.58
TRBV4-1-201ENST00000390357 FSHBP01225 129 aa11.43□□□□□ -0.58
TRBV4-1-201ENST00000390357 ZFP36P26651 326 aaKnown RBP11.43□□□□□ -0.58
TRBV4-1-201ENST00000390357 MAGEA2P43356 314 aa11.43□□□□□ -0.58
TRBV4-1-201ENST00000390357 RAD23AP54725 363 aa11.43□□□□□ -0.58
TRBV4-1-201ENST00000390357 MZT1Q08AG7 82 aa11.43□□□□□ -0.58
TRBV4-1-201ENST00000390357 TRAP1Q12931 704 aaKnown RBP11.43□□□□□ -0.58
TRBV4-1-201ENST00000390357 TRIM25Q14258 630 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms