RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 TEX101Q9BY14 249 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 SERTAD3Q9UJW9 196 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 BRCA1P38398 1863 aaKnown RBP12.89□□□□□ -0.35
RTF1-201ENST00000389629 OGG1O15527 345 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 SEMA4FO95754 770 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 CXCL10P02778 98 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 ZNF43P17038 809 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 ABCD3P28288 659 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 DAP3P51398 398 aaKnown RBP12.89□□□□□ -0.35
RTF1-201ENST00000389629 FAM160A2Q8N612 972 aaPredicted RBP12.89□□□□□ -0.35
RTF1-201ENST00000389629 GVQW1Q8N7I0 195 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 BCORP1Q8N888 145 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 NKAIN3Q8N8D7 197 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 ASB13Q8WXK3 278 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 MALSU1Q96EH3 234 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 PHYHIPLQ96FC7 376 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 SPIN2AQ99865 258 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 SPIN2BQ9BPZ2 258 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 CTSFQ9UBX1 484 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 B3GALT5Q9Y2C3 310 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 A0A1W2PPV9 198 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 ZFP92A6NM28 416 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 LILRB5O75023 590 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 G0S2P27469 103 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 RAB11AP62491 216 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 MIDNQ504T8 468 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 SHEQ5VZ18 495 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 ZNF705AQ6ZN79 300 aaPredicted RBP12.89□□□□□ -0.35
RTF1-201ENST00000389629 TMPRSS5Q9H3S3 457 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 TRAV36DV7A0A075B6V5 113 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 ADAM10O14672 748 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 ABCD4O14678 606 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 GALR3O60755 368 aaPredicted RBP12.89□□□□□ -0.35
RTF1-201ENST00000389629 FCGR2AP12318 317 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 ZNF136P52737 540 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 RPL19P84098 196 aaKnown RBP12.89□□□□□ -0.35
RTF1-201ENST00000389629 OPN5Q6U736 354 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 GKN2Q86XP6 184 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 OR1J1Q8NGS3 322 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 SHARPINQ9H0F6 387 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 SEMA6CQ9H3T2 930 aa12.89□□□□□ -0.35
RTF1-201ENST00000389629 CCDC85CA6NKD9 419 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 LILRB3O75022 631 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 ADAP1O75689 374 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 MT-ND4LP03901 98 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 H2BFSP57053 126 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 BTG2P78543 158 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 SLC17A1Q14916 467 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 CLEC12BQ2HXU8 276 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 OR10AC1Q8NH08 325 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 ZNF764Q96H86 408 aaPredicted RBP12.88□□□□□ -0.35
RTF1-201ENST00000389629 OR10A2Q9H208 303 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 LHX9Q9NQ69 397 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 TMEM272A0A1B0GTI8 110 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 ZNF587BE7ETH6 402 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 TAAR5O14804 337 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 AKR7A3O95154 331 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 SMIM6P0DI80 62 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 ZIC1Q15915 447 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 ACKR1Q16570 336 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 WDR38Q5JTN6 314 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 SFTPA1Q8IWL2 248 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 CA13Q8N1Q1 262 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 TOX2Q96NM4 488 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 TMPRSS13Q9BYE2 586 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 GHRLQ9UBU3 117 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 NXT1Q9UKK6 140 aaKnown RBP12.88□□□□□ -0.35
RTF1-201ENST00000389629 GREB1Q4ZG55 1949 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 KIR2DS5A0A0G2JLQ3 304 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 A0A0G2JNG1 304 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 KIR2DS3K7RE56 304 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 HCRTR1O43613 425 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 ALOX12BO75342 701 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 PTP4A3O75365 173 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 NR2C1P13056 603 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 KIR2DS5Q14953 304 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 OR2T2Q6IF00 324 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 VN1R4Q7Z5H5 301 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 TMEM123Q8N131 208 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 UBAC2Q8NBM4 344 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 SGCZQ96LD1 299 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 TRPM6Q9BX84 2022 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 C9orf170A2RU37 121 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 PHF1O43189 567 aaPredicted RBP12.88□□□□□ -0.35
RTF1-201ENST00000389629 NPBWR1P48145 328 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 GUK1Q16774 197 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 ATPAF1Q5TC12 328 aaPredicted RBP12.88□□□□□ -0.35
RTF1-201ENST00000389629 AGBL4Q5VU57 503 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 C16orf52Q8NHV5 167 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 RRNAD1Q96FB5 475 aaKnown RBP12.88□□□□□ -0.35
RTF1-201ENST00000389629 C1orf198Q9H425 327 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 SERGEFQ9UGK8 458 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 PCDHGA1Q9Y5H4 931 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 KCNMB2Q9Y691 235 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 MYOFQ9NZM1 2061 aa12.88□□□□□ -0.35
RTF1-201ENST00000389629 CTSVO60911 334 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 FOLR1P15328 257 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 EFNB2P52799 333 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 OR5L1Q8NGL2 311 aa12.87□□□□□ -0.35
RTF1-201ENST00000389629 SPPL3Q8TCT6 385 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms