RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 FUOMA2VDF0 154 aa11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 SLC33A1O00400 549 aaPredicted RBP11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 NKX2-8O15522 239 aa11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 OR8G1Q15617 311 aa11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 OR51F2Q8NH61 342 aa11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 OR51J1Q9H342 316 aa11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 ZCCHC4Q9H5U6 513 aa11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 LRP12Q9Y561 859 aa11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 ALG5Q9Y673 324 aa11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 CHD5Q8TDI0 1954 aa11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 A0A0G2JMP0 313 aa11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 MPZL1O95297 269 aa11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 NRASP01111 189 aa11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 RAC3P60763 192 aa11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 PCK2Q16822 640 aa11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 RTL6Q6ICC9 239 aa11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 CD300LDQ6UXZ3 194 aa11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 IDO2Q6ZQW0 420 aa11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 OR4M2Q8NGB6 313 aa11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 EMG1Q92979 244 aaKnown RBP11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 MCHR2Q969V1 340 aa11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 REEP6Q96HR9 211 aa11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 PTTG3PQ9NZH4 202 aa11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 MBD2Q9UBB5 411 aa11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 WDR81Q562E7 1941 aa11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 MEIOCA2RUB1 952 aa11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 OR6C6A6NF89 314 aa11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 SMIM10L1P0DMW3 83 aa11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 GAAP10253 952 aa11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 FAHP16930 419 aa11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 OR2A2Q6IF42 318 aa11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 KANSL1Q7Z3B3 1105 aa11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 SMIM10Q96HG1 83 aa11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 RANBP3Q9H6Z4 567 aaPredicted RBP11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 HS3ST3B1Q9Y662 390 aa11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 SPTBN1Q01082 2364 aaKnown RBP11.75□□□□□ -0.53
PTPRN2-202ENST00000389416 SMCO3A2RU48 225 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 M0QYG6 137 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 ZNF780AO75290 641 aaPredicted RBP11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 HLA-HP01893 362 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 LIMS3P0CW19 117 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 LIMS4P0CW20 117 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 ZNF136P52737 540 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 SLC25A1P53007 311 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 AQP6Q13520 282 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 INPP5JQ15735 1006 aaPredicted RBP11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 TATDN3Q17R31 274 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 DRAXINQ8NBI3 349 aaPredicted RBP11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 C7orf50Q9BRJ6 194 aaKnown RBP11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 JAM3Q9BX67 310 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 B3GAT1Q9P2W7 334 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 LSM5Q9Y4Y9 91 aaKnown RBP11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 ETV7Q9Y603 341 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 ZNF646O15015 1829 aaPredicted RBP11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 A0A1B0GVG6 124 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 SC5DO75845 299 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 SNRPD2P62316 118 aaKnown RBP11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 ZNF709Q8N972 641 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 FGF11Q92914 225 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 PELI1Q96FA3 418 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 C12orf10Q9HB07 376 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 RAB9BQ9NP90 201 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 A0A1B0GTH9 108 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 BHLHE40O14503 412 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 HOXB5P09067 269 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 ANKRD34CP0C6C1 535 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 CAV2P51636 162 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 BDH1Q02338 343 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 SLC9A3R2Q15599 337 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 CHPT1Q8WUD6 406 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 SECTM1Q8WVN6 248 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 ISYNA1Q9NPH2 558 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 MED12Q93074 2177 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 GFRA3O60609 400 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 TFP02787 698 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 ELK1P19419 428 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 RNPS1Q15287 305 aaKnown RBP11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 PAN3Q58A45 887 aaKnown RBP11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 SLC7A6Q92536 515 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 TMEM246Q9BRR3 403 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 FAM117AQ9C073 453 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 NELFAQ9H3P2 528 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 NDRG3Q9UGV2 375 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 IL17BQ9UHF5 180 aa11.74□□□□□ -0.53
PTPRN2-202ENST00000389416 HS3ST1O14792 307 aa11.73□□□□□ -0.53
PTPRN2-202ENST00000389416 HLA-AP01891 365 aaKnown RBP11.73□□□□□ -0.53
PTPRN2-202ENST00000389416 UBBP0CG47 229 aa11.73□□□□□ -0.53
PTPRN2-202ENST00000389416 PSMB1P20618 241 aaKnown RBP11.73□□□□□ -0.53
PTPRN2-202ENST00000389416 CD96P40200 585 aa11.73□□□□□ -0.53
PTPRN2-202ENST00000389416 MLF1P58340 268 aa11.73□□□□□ -0.53
PTPRN2-202ENST00000389416 DOC2BQ14184 412 aa11.73□□□□□ -0.53
PTPRN2-202ENST00000389416 SIAH3Q8IW03 269 aa11.73□□□□□ -0.53
PTPRN2-202ENST00000389416 UCN2Q96RP3 112 aa11.73□□□□□ -0.53
PTPRN2-202ENST00000389416 AKIRIN1Q9H9L7 192 aaPredicted RBP11.73□□□□□ -0.53
PTPRN2-202ENST00000389416 CACNA1BQ00975 2339 aa11.73□□□□□ -0.53
PTPRN2-202ENST00000389416 GDF9O60383 454 aa11.73□□□□□ -0.53
PTPRN2-202ENST00000389416 LYZL6O75951 148 aa11.73□□□□□ -0.53
PTPRN2-202ENST00000389416 ZNF32P17041 273 aa11.73□□□□□ -0.53
PTPRN2-202ENST00000389416 ACAA2P42765 397 aaKnown RBP11.73□□□□□ -0.53
PTPRN2-202ENST00000389416 RPS23P62266 143 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms